Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1843
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M30140-1|AAA28380.1|  364|Drosophila melanogaster protein ( D.me...    32   0.79 
AY061824-1|AAL27635.1|  364|Drosophila melanogaster GH19095p pro...    32   0.79 
AE014134-2899|AAF53644.1|  364|Drosophila melanogaster CG5711-PA...    32   0.79 
BT012337-1|AAS77462.1|  437|Drosophila melanogaster AT11512p pro...    29   5.6  

>M30140-1|AAA28380.1|  364|Drosophila melanogaster protein (
           D.melanogaster arrestin(Arr) gene, complete cds. ).
          Length = 364

 Score = 32.3 bits (70), Expect = 0.79
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 536 GCPLAPAASAQRLHYTIPTLV 474
           GCPL P +S Q++ Y +PTLV
Sbjct: 260 GCPLNPGSSLQKVMYLVPTLV 280


>AY061824-1|AAL27635.1|  364|Drosophila melanogaster GH19095p
           protein.
          Length = 364

 Score = 32.3 bits (70), Expect = 0.79
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 536 GCPLAPAASAQRLHYTIPTLV 474
           GCPL P +S Q++ Y +PTLV
Sbjct: 260 GCPLNPGSSLQKVMYLVPTLV 280


>AE014134-2899|AAF53644.1|  364|Drosophila melanogaster CG5711-PA
           protein.
          Length = 364

 Score = 32.3 bits (70), Expect = 0.79
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 536 GCPLAPAASAQRLHYTIPTLV 474
           GCPL P +S Q++ Y +PTLV
Sbjct: 260 GCPLNPGSSLQKVMYLVPTLV 280


>BT012337-1|AAS77462.1|  437|Drosophila melanogaster AT11512p
           protein.
          Length = 437

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 426 PRGESQSCIHHLLEKEHQCGNGIMEPLSRRG 518
           P GE++SC+ H LE E Q G  + E + R G
Sbjct: 275 PPGETRSCLEHSLETERQVGL-LAERIERDG 304


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,026,870
Number of Sequences: 53049
Number of extensions: 747209
Number of successful extensions: 1522
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)