Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1840
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78121-1|CAA55011.1| 653|Homo sapiens choroidermia, Rab geranyl... 90 8e-18
X57637-1|CAA40855.1| 316|Homo sapiens TCD protein. 90 8e-18
M83773-1|AAA61032.1| 365|Homo sapiens TCD protein protein. 90 8e-18
AL035451-5|CAI42043.1| 653|Homo sapiens choroideremia (Rab esco... 90 8e-18
AL022401-1|CAI43163.1| 653|Homo sapiens choroideremia (Rab esco... 90 8e-18
AL009175-2|CAI42098.1| 653|Homo sapiens choroideremia (Rab esco... 90 8e-18
X64728-1|CAA45979.1| 656|Homo sapiens hCHML protein. 87 8e-17
BC117360-1|AAI17361.1| 656|Homo sapiens choroideremia-like (Rab... 87 8e-17
AL133390-5|CAC19784.1| 656|Homo sapiens choroideremia-like (Rab... 87 8e-17
AF482426-3|AAO15716.1| 656|Homo sapiens choroideremia-like prot... 87 8e-17
S37423-1|AAD13814.1| 140|Homo sapiens chorioderemia (CHM) gene ... 52 3e-06
EF560739-1|ABQ59049.1| 926|Homo sapiens ERN2 protein protein. 31 5.4
EF560720-1|ABQ59030.1| 874|Homo sapiens ERN2 protein protein. 31 5.4
DQ496110-1|ABF47099.1| 801|Homo sapiens transferrin receptor 2 ... 31 5.4
BC142630-1|AAI42631.1| 801|Homo sapiens transferrin receptor 2 ... 31 5.4
AK131280-1|BAD18455.1| 974|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK000421-1|BAA91153.1| 342|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF067864-1|AAD45561.1| 801|Homo sapiens transferrin receptor 2 ... 31 5.4
AF053356-6|AAC78796.1| 780|Homo sapiens transferrin-receptor2 p... 31 5.4
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 30 7.1
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 30 7.1
Y09631-1|CAA70844.1| 758|Homo sapiens PIBF1 protein protein. 30 9.4
BC051911-1|AAH51911.1| 757|Homo sapiens chromosome 13 open read... 30 9.4
BC041806-1|AAH41806.1| 698|Homo sapiens C13orf24 protein protein. 30 9.4
BC006009-1|AAH06009.1| 414|Homo sapiens Unknown (protein for IM... 30 9.4
AL391384-3|CAI15673.1| 757|Homo sapiens RP11-505F3.1 protein. 30 9.4
AL354720-1|CAI14869.1| 757|Homo sapiens RP11-505F3.1 protein. 30 9.4
AJ238850-1|CAB52754.1| 1203|Homo sapiens hyperpolarization-activ... 30 9.4
AJ132429-1|CAB42604.1| 1203|Homo sapiens hyperpolarization-activ... 30 9.4
AF330046-1|AAL37481.1| 757|Homo sapiens progesterone-induced bl... 30 9.4
>X78121-1|CAA55011.1| 653|Homo sapiens choroidermia, Rab
geranylgeranyltransferase component A (REP-1) protein.
Length = 653
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPG 231
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+QAE +F++ICP
Sbjct: 542 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICPN 601
Query: 232 EEFLPRAPNPEEIVFEDD 285
E+F P PNPE+I+ + D
Sbjct: 602 EDFCPPPPNPEDIILDGD 619
>X57637-1|CAA40855.1| 316|Homo sapiens TCD protein.
Length = 316
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPG 231
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+QAE +F++ICP
Sbjct: 205 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICPN 264
Query: 232 EEFLPRAPNPEEIVFEDD 285
E+F P PNPE+I+ + D
Sbjct: 265 EDFCPPPPNPEDIILDGD 282
>M83773-1|AAA61032.1| 365|Homo sapiens TCD protein protein.
Length = 365
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPG 231
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+QAE +F++ICP
Sbjct: 254 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICPN 313
Query: 232 EEFLPRAPNPEEIVFEDD 285
E+F P PNPE+I+ + D
Sbjct: 314 EDFCPPPPNPEDIILDGD 331
>AL035451-5|CAI42043.1| 653|Homo sapiens choroideremia (Rab escort
protein 1) protein.
Length = 653
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPG 231
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+QAE +F++ICP
Sbjct: 542 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICPN 601
Query: 232 EEFLPRAPNPEEIVFEDD 285
E+F P PNPE+I+ + D
Sbjct: 602 EDFCPPPPNPEDIILDGD 619
>AL022401-1|CAI43163.1| 653|Homo sapiens choroideremia (Rab escort
protein 1) protein.
Length = 653
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPG 231
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+QAE +F++ICP
Sbjct: 542 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICPN 601
Query: 232 EEFLPRAPNPEEIVFEDD 285
E+F P PNPE+I+ + D
Sbjct: 602 EDFCPPPPNPEDIILDGD 619
>AL009175-2|CAI42098.1| 653|Homo sapiens choroideremia (Rab escort
protein 1) protein.
Length = 653
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPG 231
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+QAE +F++ICP
Sbjct: 542 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICPN 601
Query: 232 EEFLPRAPNPEEIVFEDD 285
E+F P PNPE+I+ + D
Sbjct: 602 EDFCPPPPNPEDIILDGD 619
>X64728-1|CAA45979.1| 656|Homo sapiens hCHML protein.
Length = 656
Score = 86.6 bits (205), Expect = 8e-17
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Frame = +1
Query: 67 KPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGE 234
KP+ LW+L++N++D+S S + + NV+VCSGPD GL + AV+QAE +F++I P E
Sbjct: 545 KPRLLWALYFNMRDSSGISRSSYNGLPSNVYVCSGPDCGLGNEHAVKQAETLFQEIFPTE 604
Query: 235 EFLPRAPNPEEIVFEDD 285
EF P PNPE+I+F+ D
Sbjct: 605 EFCPPPPNPEDIIFDGD 621
>BC117360-1|AAI17361.1| 656|Homo sapiens choroideremia-like (Rab
escort protein 2) protein.
Length = 656
Score = 86.6 bits (205), Expect = 8e-17
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Frame = +1
Query: 67 KPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGE 234
KP+ LW+L++N++D+S S + + NV+VCSGPD GL + AV+QAE +F++I P E
Sbjct: 545 KPRLLWALYFNMRDSSGISRSSYNGLPSNVYVCSGPDCGLGNEHAVKQAETLFQEIFPTE 604
Query: 235 EFLPRAPNPEEIVFEDD 285
EF P PNPE+I+F+ D
Sbjct: 605 EFCPPPPNPEDIIFDGD 621
>AL133390-5|CAC19784.1| 656|Homo sapiens choroideremia-like (Rab
escort protein 2) protein.
Length = 656
Score = 86.6 bits (205), Expect = 8e-17
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Frame = +1
Query: 67 KPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGE 234
KP+ LW+L++N++D+S S + + NV+VCSGPD GL + AV+QAE +F++I P E
Sbjct: 545 KPRLLWALYFNMRDSSGISRSSYNGLPSNVYVCSGPDCGLGNEHAVKQAETLFQEIFPTE 604
Query: 235 EFLPRAPNPEEIVFEDD 285
EF P PNPE+I+F+ D
Sbjct: 605 EFCPPPPNPEDIIFDGD 621
>AF482426-3|AAO15716.1| 656|Homo sapiens choroideremia-like protein
protein.
Length = 656
Score = 86.6 bits (205), Expect = 8e-17
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Frame = +1
Query: 67 KPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGE 234
KP+ LW+L++N++D+S S + + NV+VCSGPD GL + AV+QAE +F++I P E
Sbjct: 545 KPRLLWALYFNMRDSSGISRSSYNGLPSNVYVCSGPDCGLGNEHAVKQAETLFQEIFPTE 604
Query: 235 EFLPRAPNPEEIVFEDD 285
EF P PNPE+I+F+ D
Sbjct: 605 EFCPPPPNPEDIIFDGD 621
>S37423-1|AAD13814.1| 140|Homo sapiens chorioderemia (CHM) gene
protein.
Length = 140
Score = 51.6 bits (118), Expect = 3e-06
Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = +1
Query: 64 DKPKCLWSLFYNVKDTS----SPVSSVVDNVHVCSGPDAGLDFDRAVEQ 198
+KP+ LW+L++N++D+S S + + NV+VCSGPD GL D AV+Q
Sbjct: 92 EKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQ 140
>EF560739-1|ABQ59049.1| 926|Homo sapiens ERN2 protein protein.
Length = 926
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 170 PASGPEQTCTLSTTLDTGELVSFTL*NSDHRHFGLSVAAV 51
PASGP T TL +TLDT L++ + D F +S A V
Sbjct: 266 PASGPRDTATLFSTLDTQLLMTLYV-GKDETGFYVSKALV 304
>EF560720-1|ABQ59030.1| 874|Homo sapiens ERN2 protein protein.
Length = 874
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 170 PASGPEQTCTLSTTLDTGELVSFTL*NSDHRHFGLSVAAV 51
PASGP T TL +TLDT L++ + D F +S A V
Sbjct: 266 PASGPRDTATLFSTLDTQLLMTLYV-GKDETGFYVSKALV 304
>DQ496110-1|ABF47099.1| 801|Homo sapiens transferrin receptor 2
protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 345 LLLRFGFFVLFPLEFGSVGDVILEH 271
LL+R L PL+FG GDV+L H
Sbjct: 629 LLIRLSHDRLLPLDFGRYGDVVLRH 653
>BC142630-1|AAI42631.1| 801|Homo sapiens transferrin receptor 2
protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 345 LLLRFGFFVLFPLEFGSVGDVILEH 271
LL+R L PL+FG GDV+L H
Sbjct: 629 LLIRLSHDRLLPLDFGRYGDVVLRH 653
>AK131280-1|BAD18455.1| 974|Homo sapiens protein ( Homo sapiens
cDNA FLJ16228 fis, clone FEBRA2008692, highly similar
to Homo sapiens IRE1b mRNA for protein
kinase/ribonuclease IRE1 beta. ).
Length = 974
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 170 PASGPEQTCTLSTTLDTGELVSFTL*NSDHRHFGLSVAAV 51
PASGP T TL +TLDT L++ + D F +S A V
Sbjct: 314 PASGPRDTATLFSTLDTQLLMTLYV-GKDETGFYVSKALV 352
>AK000421-1|BAA91153.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ20414 fis, clone KAT02179. ).
Length = 342
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 345 LLLRFGFFVLFPLEFGSVGDVILEH 271
LL+R L PL+FG GDV+L H
Sbjct: 170 LLIRLSHDRLLPLDFGRYGDVVLRH 194
>AF067864-1|AAD45561.1| 801|Homo sapiens transferrin receptor 2
alpha protein.
Length = 801
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 345 LLLRFGFFVLFPLEFGSVGDVILEH 271
LL+R L PL+FG GDV+L H
Sbjct: 629 LLIRLSHDRLLPLDFGRYGDVVLRH 653
>AF053356-6|AAC78796.1| 780|Homo sapiens transferrin-receptor2
protein.
Length = 780
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 345 LLLRFGFFVLFPLEFGSVGDVILEH 271
LL+R L PL+FG GDV+L H
Sbjct: 602 LLIRLSHDRLLPLDFGRYGDVVLRH 626
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 241 LPRAPNPEEIVFEDD-VTHGPEFQREQDEE 327
+P+ PEE+ FE++ VTH E+ E++EE
Sbjct: 6564 VPKELEPEEVAFEEEVVTHVEEYLVEEEEE 6593
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 241 LPRAPNPEEIVFEDD-VTHGPEFQREQDEE 327
+P+ PEE+ FE++ VTH E+ E++EE
Sbjct: 10826 VPKELEPEEVAFEEEVVTHVEEYLVEEEEE 10855
>Y09631-1|CAA70844.1| 758|Homo sapiens PIBF1 protein protein.
Length = 758
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
>BC051911-1|AAH51911.1| 757|Homo sapiens chromosome 13 open reading
frame 24 protein.
Length = 757
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
>BC041806-1|AAH41806.1| 698|Homo sapiens C13orf24 protein protein.
Length = 698
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
>BC006009-1|AAH06009.1| 414|Homo sapiens Unknown (protein for
IMAGE:4294615) protein.
Length = 414
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
>AL391384-3|CAI15673.1| 757|Homo sapiens RP11-505F3.1 protein.
Length = 757
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
>AL354720-1|CAI14869.1| 757|Homo sapiens RP11-505F3.1 protein.
Length = 757
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
>AJ238850-1|CAB52754.1| 1203|Homo sapiens
hyperpolarization-activated channel type 4 protein.
Length = 1203
Score = 29.9 bits (64), Expect = 9.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 263 SGLGARGRNSSPGQIFLKICSACSTALSKSSPASGPEQTCTLSTT 129
SGLG G +P + ++ S +AL +SPAS P Q T S++
Sbjct: 812 SGLGNLGAGQTPRHL-KRLQSLIPSALGSASPASSPSQVDTPSSS 855
>AJ132429-1|CAB42604.1| 1203|Homo sapiens
hyperpolarization-activated cyclic nucleotide gated
cation channel hHCN4 protein.
Length = 1203
Score = 29.9 bits (64), Expect = 9.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 263 SGLGARGRNSSPGQIFLKICSACSTALSKSSPASGPEQTCTLSTT 129
SGLG G +P + ++ S +AL +SPAS P Q T S++
Sbjct: 812 SGLGNLGAGQTPRHL-KRLQSLIPSALGSASPASSPSQVDTPSSS 855
>AF330046-1|AAL37481.1| 757|Homo sapiens progesterone-induced
blocking factor 1 protein.
Length = 757
Score = 29.9 bits (64), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 670 QTRTSRNARSQATKAYISYRDYYHTRFEN 584
Q S+ AR + + Y++ RD+Y T +EN
Sbjct: 347 QLEESKKAREEMYEKYVASRDHYKTEYEN 375
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,463,328
Number of Sequences: 237096
Number of extensions: 2121823
Number of successful extensions: 6258
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6224
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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