Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1840
(710 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061052-1|AAL28600.1| 511|Drosophila melanogaster LD02194p pro... 54 3e-07
AF105063-1|AAD16891.1| 511|Drosophila melanogaster Rab escort p... 54 3e-07
AE013599-2914|AAF57544.1| 511|Drosophila melanogaster CG8432-PA... 54 3e-07
AY052093-1|AAK93517.1| 1284|Drosophila melanogaster SD04165p pro... 31 2.0
AE014298-784|AAN09149.1| 1284|Drosophila melanogaster CG3125-PB,... 31 2.0
AE014298-783|AAF46073.2| 1284|Drosophila melanogaster CG3125-PA,... 31 2.0
AY070586-1|AAL48057.1| 421|Drosophila melanogaster RE68879p pro... 30 2.7
AJ242938-1|CAB62168.1| 880|Drosophila melanogaster homeoprotein... 30 2.7
AF181638-1|AAD55424.1| 880|Drosophila melanogaster BcDNA.GH0863... 30 2.7
AE013599-217|AAM70823.1| 880|Drosophila melanogaster CG3268-PA ... 30 2.7
AY075249-1|AAL68116.1| 430|Drosophila melanogaster AT21437p pro... 29 4.7
AF203342-1|AAF13280.1| 1729|Drosophila melanogaster pericardine ... 29 4.7
AF125157-1|AAF20167.1| 420|Drosophila melanogaster tryptophanyl... 29 4.7
AF125156-1|AAF20166.1| 430|Drosophila melanogaster tryptophanyl... 29 4.7
AE014297-898|AAF54352.1| 430|Drosophila melanogaster CG9735-PB,... 29 4.7
AE014297-897|AAG22136.1| 430|Drosophila melanogaster CG9735-PA,... 29 4.7
AE014296-2068|AAF49980.2| 1713|Drosophila melanogaster CG5700-PB... 29 4.7
>AY061052-1|AAL28600.1| 511|Drosophila melanogaster LD02194p
protein.
Length = 511
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1
Query: 79 LWSLFYNVKDTSSPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAPN 258
++S ++ + SS S ++++ P LD+D A+ A IF K+ P +FLPRAP+
Sbjct: 412 IFSSYFTIAAQSSK-SPAAEHIYYTDPPTYELDYDAAIANARDIFGKMFPDADFLPRAPD 470
Query: 259 PEEIVFEDD 285
PEEIV + +
Sbjct: 471 PEEIVVDGE 479
>AF105063-1|AAD16891.1| 511|Drosophila melanogaster Rab escort
protein homolog protein.
Length = 511
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1
Query: 79 LWSLFYNVKDTSSPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAPN 258
++S ++ + SS S ++++ P LD+D A+ A IF K+ P +FLPRAP+
Sbjct: 412 IFSSYFTIAAQSSK-SPAAEHIYYTDPPTYELDYDAAIANARDIFGKMFPDADFLPRAPD 470
Query: 259 PEEIVFEDD 285
PEEIV + +
Sbjct: 471 PEEIVVDGE 479
>AE013599-2914|AAF57544.1| 511|Drosophila melanogaster CG8432-PA
protein.
Length = 511
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1
Query: 79 LWSLFYNVKDTSSPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAPN 258
++S ++ + SS S ++++ P LD+D A+ A IF K+ P +FLPRAP+
Sbjct: 412 IFSSYFTIAAQSSK-SPAAEHIYYTDPPTYELDYDAAIANARDIFGKMFPDADFLPRAPD 470
Query: 259 PEEIVFEDD 285
PEEIV + +
Sbjct: 471 PEEIVVDGE 479
>AY052093-1|AAK93517.1| 1284|Drosophila melanogaster SD04165p protein.
Length = 1284
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 305 NSGPWVTSSSNTISSGLGARGRN-SSPGQIFLKICSACSTALSKSSPASG-PEQTCTLST 132
NS +S +T+S+ RG N SSP ++ +KI S+C ++ + ++ G P Q+ L
Sbjct: 1126 NSSAAGAASGSTLSNNHNHRGHNNSSPNKLEVKINSSCGSSPTHNNGGMGSPGQSLPLIF 1185
Query: 131 TLDTGE 114
T + E
Sbjct: 1186 TEEQRE 1191
>AE014298-784|AAN09149.1| 1284|Drosophila melanogaster CG3125-PB,
isoform B protein.
Length = 1284
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 305 NSGPWVTSSSNTISSGLGARGRN-SSPGQIFLKICSACSTALSKSSPASG-PEQTCTLST 132
NS +S +T+S+ RG N SSP ++ +KI S+C ++ + ++ G P Q+ L
Sbjct: 1126 NSSAAGAASGSTLSNNHNHRGHNNSSPNKLEVKINSSCGSSPTHNNGGMGSPGQSLPLIF 1185
Query: 131 TLDTGE 114
T + E
Sbjct: 1186 TEEQRE 1191
>AE014298-783|AAF46073.2| 1284|Drosophila melanogaster CG3125-PA,
isoform A protein.
Length = 1284
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 305 NSGPWVTSSSNTISSGLGARGRN-SSPGQIFLKICSACSTALSKSSPASG-PEQTCTLST 132
NS +S +T+S+ RG N SSP ++ +KI S+C ++ + ++ G P Q+ L
Sbjct: 1126 NSSAAGAASGSTLSNNHNHRGHNNSSPNKLEVKINSSCGSSPTHNNGGMGSPGQSLPLIF 1185
Query: 131 TLDTGE 114
T + E
Sbjct: 1186 TEEQRE 1191
>AY070586-1|AAL48057.1| 421|Drosophila melanogaster RE68879p
protein.
Length = 421
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 173 WTSTEPSNRLSKSSRRFVRERSFCRGRPTPRR*CSRMTSPTDPNSNG-NKTKKPNRRSRH 349
W + S+SS R RER R RPT RR R SP D G + ++ R RH
Sbjct: 154 WQRSPALRHRSRSSERKNRERDRQR-RPTERRPVRRSQSPRDRCHGGRDLDQRRQRNQRH 212
>AJ242938-1|CAB62168.1| 880|Drosophila melanogaster homeoprotein
phtf protein.
Length = 880
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -1
Query: 311 RWNSGPWVTSSSNTISSGLGARGRNSSPGQIFLKICSACSTALSKSSPASGPEQTCTLST 132
R N+ VT+S++ +RG SS C A SSPASG Q CT S
Sbjct: 429 RLNTTNGVTASASPTEKKPQSRGNESSTS---CAESDECDDADIMSSPASGCNQECTTSA 485
Query: 131 T 129
T
Sbjct: 486 T 486
>AF181638-1|AAD55424.1| 880|Drosophila melanogaster BcDNA.GH08636
protein.
Length = 880
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -1
Query: 311 RWNSGPWVTSSSNTISSGLGARGRNSSPGQIFLKICSACSTALSKSSPASGPEQTCTLST 132
R N+ VT+S++ +RG SS C A SSPASG Q CT S
Sbjct: 429 RLNTTNGVTASASPTEKKPQSRGNESSTS---CAESDECDDADIMSSPASGCNQECTTSA 485
Query: 131 T 129
T
Sbjct: 486 T 486
>AE013599-217|AAM70823.1| 880|Drosophila melanogaster CG3268-PA
protein.
Length = 880
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -1
Query: 311 RWNSGPWVTSSSNTISSGLGARGRNSSPGQIFLKICSACSTALSKSSPASGPEQTCTLST 132
R N+ VT+S++ +RG SS C A SSPASG Q CT S
Sbjct: 429 RLNTTNGVTASASPTEKKPQSRGNESSTS---CAESDECDDADIMSSPASGCNQECTTSA 485
Query: 131 T 129
T
Sbjct: 486 T 486
>AY075249-1|AAL68116.1| 430|Drosophila melanogaster AT21437p
protein.
Length = 430
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 SSPVSSVVDNVHVCSGPDAGLDFDRAVEQ 198
++P VVD +V S DAG+D+D+ +++
Sbjct: 39 TAPTEDVVDPWNVASSNDAGVDYDKLIKR 67
>AF203342-1|AAF13280.1| 1729|Drosophila melanogaster pericardine
protein.
Length = 1729
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 88 LFYNVKDTSSPVSSVVDNVH-VCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAPNPE 264
LF + + ++V D V SGP + DR E + K E+ + + +PE
Sbjct: 1460 LFNTISQFGNNANAVTDRADAVYSGPALTDESDRVPEAQLKSTKPKEEAEQVVSKPDHPE 1519
Query: 265 EIVFEDDVTHGPEFQREQDEEAEPK 339
+ ++D+ P+ + ++DE E K
Sbjct: 1520 PVQYDDEDEADPD-EYDEDEYYEEK 1543
>AF125157-1|AAF20167.1| 420|Drosophila melanogaster
tryptophanyl-tRNA synthetase protein.
Length = 420
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 SSPVSSVVDNVHVCSGPDAGLDFDRAVEQ 198
++P VVD +V S DAG+D+D+ +++
Sbjct: 29 TAPTEDVVDPWNVASSNDAGVDYDKLIKR 57
>AF125156-1|AAF20166.1| 430|Drosophila melanogaster
tryptophanyl-tRNA synthetase protein.
Length = 430
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 SSPVSSVVDNVHVCSGPDAGLDFDRAVEQ 198
++P VVD +V S DAG+D+D+ +++
Sbjct: 39 TAPTEDVVDPWNVASSNDAGVDYDKLIKR 67
>AE014297-898|AAF54352.1| 430|Drosophila melanogaster CG9735-PB,
isoform B protein.
Length = 430
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 SSPVSSVVDNVHVCSGPDAGLDFDRAVEQ 198
++P VVD +V S DAG+D+D+ +++
Sbjct: 39 TAPTEDVVDPWNVASSNDAGVDYDKLIKR 67
>AE014297-897|AAG22136.1| 430|Drosophila melanogaster CG9735-PA,
isoform A protein.
Length = 430
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 SSPVSSVVDNVHVCSGPDAGLDFDRAVEQ 198
++P VVD +V S DAG+D+D+ +++
Sbjct: 39 TAPTEDVVDPWNVASSNDAGVDYDKLIKR 67
>AE014296-2068|AAF49980.2| 1713|Drosophila melanogaster CG5700-PB
protein.
Length = 1713
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 88 LFYNVKDTSSPVSSVVDNVH-VCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAPNPE 264
LF + + ++V D V SGP + DR E + K E+ + + +PE
Sbjct: 1444 LFNTISQFGNNANAVTDRADAVYSGPALTDESDRVPEAQLKSTKPKEEAEQVVSKLDHPE 1503
Query: 265 EIVFEDDVTHGPEFQREQDEEAEPK 339
+ ++D+ P+ + ++DE E K
Sbjct: 1504 PVQYDDEDEADPD-EYDEDEYYEEK 1527
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,371,743
Number of Sequences: 53049
Number of extensions: 692624
Number of successful extensions: 2275
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2258
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -