Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1832
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 247 1e-66
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 211 1e-55
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 184 1e-47
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 183 2e-47
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 150 2e-37
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 122 6e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 109 4e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 88 2e-18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 62 1e-10
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 1.8
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 3.1
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 3.1
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 27 4.1
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 4.1
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 4.1
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 27 4.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 4.1
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 5.4
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 7.2
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 7.2
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 247 bits (605), Expect = 1e-66
Identities = 113/158 (71%), Positives = 125/158 (79%)
Frame = +2
Query: 53 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 232
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 233 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRH 412
FT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNGSQFFITTV T WLDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 413 VVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 526
VVFG V EGM+VVK++E+ GS SG T RIVI CG +
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 211 bits (515), Expect = 1e-55
Identities = 97/147 (65%), Positives = 112/147 (76%)
Frame = +2
Query: 20 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 199
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 200 VIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFIT 379
VIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+NGSQFFIT
Sbjct: 79 VIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT 138
Query: 380 TVKTSWLDGRHVVFGNVVEGMEVVKQI 460
TVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 139 TVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 184 bits (448), Expect = 1e-47
Identities = 89/169 (52%), Positives = 115/169 (68%), Gaps = 8/169 (4%)
Frame = +2
Query: 44 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 205
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 206 PNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 382
FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 383 VKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 526
V +LDG+HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 183 bits (446), Expect = 2e-47
Identities = 90/160 (56%), Positives = 111/160 (69%), Gaps = 4/160 (2%)
Frame = +2
Query: 53 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 220
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 221 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWL 400
QGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 401 DGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 520
DG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 150 bits (364), Expect = 2e-37
Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
Frame = +2
Query: 83 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 262
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 263 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 439
SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 440 MEVVKQI 460
+ V K++
Sbjct: 126 LSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 122 bits (294), Expect = 6e-29
Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +2
Query: 86 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 265
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 266 IYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 442
I+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 443 EVVKQIE 463
+VV +IE
Sbjct: 580 DVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 109 bits (262), Expect = 4e-25
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +2
Query: 86 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 265
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 266 IYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 442
I+G F+DE LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 443 EVVKQIETFGSQSGKTSK 496
V+ +E + S K
Sbjct: 401 NVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 87.8 bits (208), Expect = 2e-18
Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +2
Query: 86 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 265
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 266 IYGNKFEDENF-TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 433
IYG F E L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 61.7 bits (143), Expect = 1e-10
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Frame = +2
Query: 74 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 253
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 254 GGKSIY-----GNKFEDENF--TLKHTGPGVLSMANAGADTN-------GSQFFIT-TVK 388
GG+ ++ G +F F +L H G++SM+ A + GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 389 TSWLDGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 511
LD R+ ++G V EG + + +I + + G+ + I IK
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIK 164
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 114 TSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTR 293
TS P H T+ A + + +RA S++S I KE +P+ITA +P +A S +
Sbjct: 303 TSSPLHQSTT---ANHPEKTPSRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASY 357
Query: 294 ISP 302
ISP
Sbjct: 358 ISP 360
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 62 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 157
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 486 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 400
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -2
Query: 286 LKLIAVDGFSPSAVMVGEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTCLGSD 116
LKL+ G + VM+ + + E+ + A+++ L S GT + + LG +
Sbjct: 311 LKLLTEHGIECTYVMISALSYIMQEVTKIFLGGHAMLSNGALYSRAGTSLISLLGHE 367
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 358 WFPVLHHHC 384
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -2
Query: 520 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 362
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 57 STSLLTMPHWEKLLLS*EVTSLPRHVKT 140
S + TMP+WEKL V S P H +T
Sbjct: 273 SPTQATMPNWEKLPGCEGVRSFPSHPRT 300
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 4.1
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +3
Query: 54 SSTSLLTMPHWEKLLLS*EVTSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 233
+STS ++P S + S P TS C + S+ S +S+PI+ T
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPT-TSTSCTTS--TSIPTGGSSSLSTPITPTVPPT 254
Query: 234 SPTITALGENPSTAISLRTRISPLST 311
S + T++ P++ S T SPL T
Sbjct: 255 STSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 25.8 bits (54), Expect = 7.2
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +3
Query: 54 SSTSLLTMPHWEKLLLS*EVTSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 233
+STS ++P S + S P TS C + T S+ S+PI+ T
Sbjct: 141 TSTSSTSIPIPPTSTSSTDTNSNPLPT-TSTSCTTSTSIPPTGGSSSL-STPITPTVPPT 198
Query: 234 SPTITALGENPSTAISLRTRISPLST 311
S + T++ P++ S T SPL T
Sbjct: 199 STSSTSIPIPPTSTSSTDTNSSPLPT 224
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 453 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 304
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 230 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 376
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 471 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 292
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 291 SSSNL 277
SSS++
Sbjct: 222 SSSSI 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,200,921
Number of Sequences: 5004
Number of extensions: 68890
Number of successful extensions: 211
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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