Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1830
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 127 2e-29
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 125 6e-29
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 124 1e-28
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 124 1e-28
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 124 2e-28
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 124 2e-28
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 124 2e-28
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 124 2e-28
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 124 2e-28
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 122 5e-28
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 121 9e-28
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 120 2e-27
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 119 5e-27
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 119 5e-27
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 117 1e-26
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 117 1e-26
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 117 1e-26
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 114 1e-25
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 110 2e-24
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 108 9e-24
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 98 1e-20
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 79 6e-15
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 67 3e-11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 62 8e-10
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 59 7e-09
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 48 1e-05
Z35103-1|CAA84486.1| 455|Drosophila melanogaster Ndr protein ki... 31 1.7
AF239171-1|AAF67168.1| 455|Drosophila melanogaster NDR protein ... 31 1.7
AF238490-1|AAF67167.1| 459|Drosophila melanogaster NDR protein ... 31 1.7
U32626-1|AAA75448.1| 257|Drosophila melanogaster unknown protein. 29 5.1
AY061325-1|AAL28873.1| 366|Drosophila melanogaster LD24213p pro... 29 8.9
AE014297-4102|AAN14106.1| 324|Drosophila melanogaster CG5930-PC... 29 8.9
AE014297-4101|AAN14105.1| 363|Drosophila melanogaster CG5930-PB... 29 8.9
AE014297-4100|AAF56687.2| 366|Drosophila melanogaster CG5930-PA... 29 8.9
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 127 bits (306), Expect = 2e-29
Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG D I + P + Y+T FN+I+ +FP WKLG + + KPGK R P+S
Sbjct: 453 APGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPAS 512
Query: 364 YRPITLLSHVGKLXERL----LLRXMSPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LL + K+ ERL ++ M + Q GFR GH T QL RV+ +
Sbjct: 513 YRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAY 572
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGR 696
+++ Y ++FLDI AFDR WH GL K+ Q L Y LL SYLEG F R
Sbjct: 573 DSKEYCNSLFLDIREAFDRVWHIGLQLKIKQ--TLPAPYFGLLKSYLEGRRFAVR 625
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 125 bits (302), Expect = 6e-29
Identities = 68/182 (37%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG D + + P + Y+ +N+IL FP WK+ ++ + KPGK +P S
Sbjct: 454 SPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPES 513
Query: 364 YRPITLLSHVGKLXERLLLR----XMSPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + KL ERL+ M+ +L Q GFR GHST Q+ R+ H+
Sbjct: 514 YRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAF 573
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ + Y AVF+D+ AFDR WH GLI K+ + Y +L SYLE F+ R R
Sbjct: 574 DDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL--FPAPYYGVLKSYLEDRRFMVRVRNSY 631
Query: 712 SV 717
S+
Sbjct: 632 SI 633
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 124 bits (299), Expect = 1e-28
Identities = 66/172 (38%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG D I P+ + ++ FN+I G+FP WK ++ +PKPGKD+ PSS
Sbjct: 449 SPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSS 508
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHI----LLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LL+ + KL E++LL +SPH+ L Q GFR H T Q+ R+ +
Sbjct: 509 YRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAF 568
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSF 687
R Y A+FLD+ AFDR W GL+ K+++ L +LL SYL F
Sbjct: 569 EHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL--LPQNTHKLLKSYLYNRVF 618
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 124 bits (299), Expect = 1e-28
Identities = 66/172 (38%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG D I P+ + ++ FN+I G+FP WK ++ +PKPGKD+ PSS
Sbjct: 449 SPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSS 508
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHI----LLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LL+ + KL E++LL +SPH+ L Q GFR H T Q+ R+ +
Sbjct: 509 YRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAF 568
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSF 687
R Y A+FLD+ AFDR W GL+ K+++ L +LL SYL F
Sbjct: 569 EHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL--LPQNTHKLLKSYLYNTVF 618
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 124 bits (298), Expect = 2e-28
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK +P S
Sbjct: 382 APGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKS 441
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H T Q+ RV + +
Sbjct: 442 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 501
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 502 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 559
Query: 712 SVGAPNHGRGFPR 750
+ A G G P+
Sbjct: 560 TSRAGQIGAGVPQ 572
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 124 bits (298), Expect = 2e-28
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK +P S
Sbjct: 498 APGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKS 557
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H T Q+ RV + +
Sbjct: 558 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 617
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 712 SVGAPNHGRGFPR 750
+ A G G P+
Sbjct: 676 TSRAGQIGAGVPQ 688
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 124 bits (298), Expect = 2e-28
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK +P S
Sbjct: 498 APGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKS 557
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H T Q+ RV + +
Sbjct: 558 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 617
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 712 SVGAPNHGRGFPR 750
+ A G G P+
Sbjct: 676 TSRAGQIGAGVPQ 688
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 124 bits (298), Expect = 2e-28
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK +P S
Sbjct: 460 APGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKS 519
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H T Q+ RV + +
Sbjct: 520 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 579
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 580 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 637
Query: 712 SVGAPNHGRGFPR 750
+ A G G P+
Sbjct: 638 TSRAGQIGAGVPQ 650
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 124 bits (298), Expect = 2e-28
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK +P S
Sbjct: 498 APGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKS 557
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H T Q+ RV + +
Sbjct: 558 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 617
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 712 SVGAPNHGRGFPR 750
+ A G G P+
Sbjct: 676 TSRAGQIGAGVPQ 688
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 122 bits (294), Expect = 5e-28
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK P S
Sbjct: 510 APGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKS 569
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H T Q+ RV + +
Sbjct: 570 YRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAF 629
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 630 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 687
Query: 712 SVGAPNHGRGFPR 750
+ G G P+
Sbjct: 688 TSRTGQIGAGVPQ 700
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 121 bits (292), Expect = 9e-28
Identities = 68/175 (38%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG D I P + V Y+T+ FN+I G+FP WK+ K+I +PKPGK+ SS
Sbjct: 451 SPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASS 510
Query: 364 YRPITLLSHVGKLXERLLL----RXMSPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + KL E+ LL + + H ++ Q GFR H T Q+ R+ +
Sbjct: 511 YRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAF 570
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGR 696
R Y AVFLD+ AFD+ W GL+ K+ L + +LL SYL F R
Sbjct: 571 EYREYCTAVFLDVSQAFDKVWLDGLMFKI--KISLPESTHKLLKSYLYDRKFAVR 623
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 120 bits (290), Expect = 2e-27
Identities = 70/193 (36%), Positives = 100/193 (51%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG+D I + P Y+ +NSIL G++P WK +V + KPGK P S
Sbjct: 498 APGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRS 557
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRP----EQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ ERLLL+ + L + Q GFR H + Q+ RV + +
Sbjct: 558 YRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAF 617
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ Y +AVFLDI AFDR WH GL+ KL + L + +L SYL +F + + +
Sbjct: 618 ERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGE 675
Query: 712 SVGAPNHGRGFPR 750
+ G G P+
Sbjct: 676 TSRTGQIGAGVPQ 688
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 119 bits (286), Expect = 5e-27
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG DGIP+++ + P + ++++ N L G+FP WK+ K++ + KPGK NP S
Sbjct: 478 SPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPES 537
Query: 364 YRPITLLSHVGKLXERL----LLRXMSPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ E+L L++ + H L Q GFR G +T L +++ +++ +
Sbjct: 538 YRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESI 597
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKL 618
++ V LDI AFD WH GL+HKL
Sbjct: 598 QSKQSVGLVTLDIEAAFDTVWHDGLLHKL 626
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 119 bits (286), Expect = 5e-27
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG DGIP+++ + P + ++++ N L G+FP WK+ K++ + KPGK NP S
Sbjct: 426 SPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPES 485
Query: 364 YRPITLLSHVGKLXERL----LLRXMSPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + K+ E+L L++ + H L Q GFR G +T L +++ +++ +
Sbjct: 486 YRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESI 545
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKL 618
++ V LDI AFD WH GL+HKL
Sbjct: 546 QSKQSVGLVTLDIEAAFDTVWHDGLLHKL 574
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 117 bits (282), Expect = 1e-26
Identities = 70/193 (36%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG D + + + P Y+ +N+IL TGHFP WK + +PKPGK +S
Sbjct: 54 APGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNS 113
Query: 364 YRPITLLSHVGKLXERLLLRXM----SPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + KL ER+LL+ + S + Q GFR H QL RV +
Sbjct: 114 YRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 173
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ + +A FLDI AFDR WH GL++KL + + LL +YL +F R G
Sbjct: 174 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGET 231
Query: 712 SVGAPNHGRGFPR 750
+ N G P+
Sbjct: 232 TSRIGNIRAGVPQ 244
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 117 bits (282), Expect = 1e-26
Identities = 70/193 (36%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG D + + + P Y+ +N+IL TGHFP WK + +PKPGK +S
Sbjct: 501 APGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNS 560
Query: 364 YRPITLLSHVGKLXERLLLRXM----SPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + KL ER+LL+ + S + Q GFR H QL RV +
Sbjct: 561 YRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 620
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ + +A FLDI AFDR WH GL++KL + + LL +YL +F R G
Sbjct: 621 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGET 678
Query: 712 SVGAPNHGRGFPR 750
+ N G P+
Sbjct: 679 TSRIGNIRAGVPQ 691
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 117 bits (282), Expect = 1e-26
Identities = 70/193 (36%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG D + + + P Y+ +N+IL TGHFP WK + +PKPGK +S
Sbjct: 501 APGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNS 560
Query: 364 YRPITLLSHVGKLXERLLLRXM----SPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + KL ER+LL+ + S + Q GFR H QL RV +
Sbjct: 561 YRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 620
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ + +A FLDI AFDR WH GL++KL + + LL +YL +F R G
Sbjct: 621 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGET 678
Query: 712 SVGAPNHGRGFPR 750
+ N G P+
Sbjct: 679 TSRIGNIRAGVPQ 691
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 114 bits (275), Expect = 1e-25
Identities = 69/193 (35%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG D + + + P Y+ +N+IL TGHFP WK + +PKPGK +S
Sbjct: 501 APGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNS 560
Query: 364 YRPITLLSHVGKLXERLLLRXM----SPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS + KL ER+L + + S + Q GFR H QL RV +
Sbjct: 561 YRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAF 620
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQ 711
+ + +A FLDI AFDR WH GL++KL + + LL +YL +F R G
Sbjct: 621 DEKDVCSATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGET 678
Query: 712 SVGAPNHGRGFPR 750
+ N G P+
Sbjct: 679 TSRIGNIRAGVPQ 691
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 110 bits (264), Expect = 2e-24
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APGED + + P+ + ++ FNS+L G+FP WK +I + K GK + S
Sbjct: 257 APGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDS 316
Query: 364 YRPITLLSHVGKLXERLLL-RXMSPHILLR--PE-QXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LL +GK+ ERL+L R ++ + + P+ Q GFR H T QL RV++ +
Sbjct: 317 YRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM 376
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHK 615
+ Y FLDI AFDR WH GL++K
Sbjct: 377 ENKEYAVGAFLDIQQAFDRVWHPGLLYK 404
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 108 bits (259), Expect = 9e-24
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APGED + + P+ + ++ FNS+L G+FP WK +I + K GK + S
Sbjct: 455 APGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDS 514
Query: 364 YRPITLLSHVGKLXERLLL-RXMSPHILLR--PE-QXGFRXGHSTTLQLVRVMHHLADRT 531
YRP +LL +GK+ ERL+L R ++ + + P+ Q GFR H T QL RV++ +
Sbjct: 515 YRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM 574
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHK 615
+ Y FLDI AFDR WH GL++K
Sbjct: 575 ENKEYAVGAFLDIQQAFDRVWHPGLLYK 602
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 98.3 bits (234), Expect = 1e-20
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Frame = +1
Query: 229 PETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSSYRPITLLSHVGKLXE 408
P V + FN+I G+FP WK +I +PKP KD+ PS YRPI+LL+ + KL E
Sbjct: 6 PMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFE 64
Query: 409 RLLLRXMSPHI----LLRPEQXGFRXGHSTTLQLVRVMHHLADRTNARXYTAAVFLDIXX 576
+ LL +SPH+ L Q F H Q+ R+ + R Y A+FLD+
Sbjct: 65 KGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQ 124
Query: 577 AFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGR 696
AFDR W GL+ K++Q L +LL SYL+ F R
Sbjct: 125 AFDRVWLDGLMFKIIQL--LPQNIHKLLKSYLDKRVFAVR 162
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 79.0 bits (186), Expect = 6e-15
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG D + + + + + FN IL+TG +P W+ +I + KP K + +S
Sbjct: 453 SPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINS 512
Query: 364 YRPITLLSHVGKLXERLLLRXMS----PHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+LLS +GK E+++ + ++ H L+ Q F+ HST L+R+ H ++
Sbjct: 513 YRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNAL 572
Query: 532 NARXYTAAVFLDIXXAFDRXW-HAGLIHKLLQXTDLXHAYVRLLGSYLEGXSF 687
+ + + + + D AFDR HA L L+ + L+ +++ SF
Sbjct: 573 STKNHVSILATDFERAFDRVGIHAVLCR--LERWGIGPRLYNLIKAFMTNRSF 623
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 66.9 bits (156), Expect = 3e-11
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
APG + I + T + +T+ FN I ++ H P +K +I + KP D+ SS
Sbjct: 449 APGLNRISYQMIKNSSHTTKNRITKLFNEIFNS-HIPQAYKTSLIIPILKPNTDKTKTSS 507
Query: 364 YRPITLLSHVGKLXERLLLRXM----SPHILLRPEQXGFRXGHSTTLQLVRVMHHLADRT 531
YRPI+L + K+ ++++ + + + + L+ +Q GF+ G ST+ L+ V + + T
Sbjct: 508 YRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYLI---T 564
Query: 532 NARXYTAAVFLDIXXAFDRXWHAGLIHKL 618
++ +T+ V LD AFDR +I +L
Sbjct: 565 KSKMHTSLVTLDFSRAFDRVGVHSIIQQL 593
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 62.1 bits (144), Expect = 8e-10
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPK-PGKDRRNPS 360
+PG DGI + ++ F+ + G+FP WK +V++L K P KD+ PS
Sbjct: 451 SPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPS 510
Query: 361 SYRPITLLSHVGKLXERLLLRXMSPHILLRPE----QXGFRXGHSTTLQLVRVMHHLADR 528
SYR I LL GK+ E +++ + + PE Q GFR G V +
Sbjct: 511 SYRGICLLPVFGKVLEAIMVNRVRE---VLPEGCRWQFGFRQGRCVEDAWRHVKSSVG-- 565
Query: 529 TNARXYTAAVFLDIXXAFDR-XWHAGL 606
+A Y F+D AFD W A L
Sbjct: 566 ASAAQYVLGTFVDFKGAFDNVEWSAAL 592
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 58.8 bits (136), Expect = 7e-09
Identities = 57/169 (33%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Frame = +1
Query: 121 DGDLITPSEXXXXXXXXXXXXAPGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGI 300
D IT E APG DGIP + F L G FP
Sbjct: 398 DFPCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKR 457
Query: 301 WKLGKVIALPKPGKDRRN-PSSYRPITLLSHVGKLXERLL-----LRXMSPHILLRPEQX 462
WK K++ L K GK N P SYRP+ LL VGKL ER+L L SP L+ +Q
Sbjct: 458 WKKMKLVLLLK-GKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESP-TGLQGQQY 515
Query: 463 GFRXGHSTTLQLVRVMHHLADRT--------NARXYTAAVFLDIXXAFD 585
GFR G S TL ++ + A + ++ Y A + LD+ AF+
Sbjct: 516 GFRKGKS-TLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFN 563
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 48.4 bits (110), Expect = 1e-05
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Frame = +1
Query: 184 APGEDGIPSLAFFHFPETVVSYMTRXFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSS 363
+PG DGI + P + M R N IL G+ P +L + + +PK +R P
Sbjct: 359 SPGPDGITPKSAREVPSGI---MLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKR-PQD 414
Query: 364 YRPITLLSHVGKLXERLLLRXMSPHILLRPEQXGF--RXGHSTTLQLVRVMHHLADRTNA 537
+RPI++ S + + +L ++ I P Q GF G + +V ++ + +
Sbjct: 415 FRPISVPSVLVRQLNAILATRLNSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHFR 474
Query: 538 RXYTAAVFLDIXXAFDRXWHAGLIHKLLQXTDLXHAYVRLLGSYLEGXSFLGRGRGXQS 714
Y A LD+ AFD HA I+ L+ +V + + EG G G S
Sbjct: 475 SCYIAN--LDVSKAFDSLSHAS-IYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSS 530
>Z35103-1|CAA84486.1| 455|Drosophila melanogaster Ndr protein
kinase protein.
Length = 455
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +2
Query: 269 PFC---PQDTSREFGNWARLSPCPNPARTGEIPPVTVRSRCC---RTWASXSSG 412
PFC PQDT R+ NW P E T+ + CC R W SSG
Sbjct: 328 PFCSDNPQDTYRKVMNWRETLIFPPRDPISEEAKETIINFCCEADRRWVPASSG 381
>AF239171-1|AAF67168.1| 455|Drosophila melanogaster NDR protein
kinase short form protein.
Length = 455
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +2
Query: 269 PFC---PQDTSREFGNWARLSPCPNPARTGEIPPVTVRSRCC---RTWASXSSG 412
PFC PQDT R+ NW P E T+ + CC R W SSG
Sbjct: 328 PFCSDNPQDTYRKVMNWRETLIFPPRDPISEEAKETIINFCCEADRRWVPASSG 381
>AF238490-1|AAF67167.1| 459|Drosophila melanogaster NDR protein
kinase protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +2
Query: 269 PFC---PQDTSREFGNWARLSPCPNPARTGEIPPVTVRSRCC---RTWASXSSG 412
PFC PQDT R+ NW P E T+ + CC R W SSG
Sbjct: 332 PFCSDNPQDTYRKVMNWRETLIFPPRDPISEEAKETIINFCCEADRRWVPASSG 385
>U32626-1|AAA75448.1| 257|Drosophila melanogaster unknown protein.
Length = 257
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 GCS-TPFCPQDTSREFGNWARLSPCPNPARTGEIPPVTVRSRCCRTWASXSSG 412
GCS F P+D R + C +PA + P+++R RCC +W S S+G
Sbjct: 175 GCSPNDFKPEDWPRLQAR--SRNHCSSPA---SLSPLSIR-RCCSSWRSGSTG 221
>AY061325-1|AAL28873.1| 366|Drosophila melanogaster LD24213p
protein.
Length = 366
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = -2
Query: 350 LLSLPGLGKAITLPNFQIPGKCPVDRMELNXRVIYDTTVSGKWKKAREGIPSSPGALRLF 171
L S G+ + N +P K V+ N ++ T+ + +K ++ S G++ +
Sbjct: 111 LKSSAGMAAGSGIRNGLVPIKQEVNSQ--NPPPLHPTSAASMMQKQQQAASSGQGSIPIV 168
Query: 170 IRLMMRRNSLGVMRSPSPNGGTGEESRLXTL 78
L R + PSP G ESR+ T+
Sbjct: 169 ATLDPNRIMPVNITLPSPAGSASSESRVLTI 199
>AE014297-4102|AAN14106.1| 324|Drosophila melanogaster CG5930-PC,
isoform C protein.
Length = 324
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = -2
Query: 350 LLSLPGLGKAITLPNFQIPGKCPVDRMELNXRVIYDTTVSGKWKKAREGIPSSPGALRLF 171
L S G+ + N +P K V+ N ++ T+ + +K ++ S G++ +
Sbjct: 69 LKSSAGMAAGSGIRNGLVPIKQEVNSQ--NPPPLHPTSAASMMQKQQQAASSGQGSIPIV 126
Query: 170 IRLMMRRNSLGVMRSPSPNGGTGEESRLXTL 78
L R + PSP G ESR+ T+
Sbjct: 127 ATLDPNRIMPVNITLPSPAGSASSESRVLTI 157
>AE014297-4101|AAN14105.1| 363|Drosophila melanogaster CG5930-PB,
isoform B protein.
Length = 363
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = -2
Query: 350 LLSLPGLGKAITLPNFQIPGKCPVDRMELNXRVIYDTTVSGKWKKAREGIPSSPGALRLF 171
L S G+ + N +P K V+ N ++ T+ + +K ++ S G++ +
Sbjct: 108 LKSSAGMAAGSGIRNGLVPIKQEVNSQ--NPPPLHPTSAASMMQKQQQAASSGQGSIPIV 165
Query: 170 IRLMMRRNSLGVMRSPSPNGGTGEESRLXTL 78
L R + PSP G ESR+ T+
Sbjct: 166 ATLDPNRIMPVNITLPSPAGSASSESRVLTI 196
>AE014297-4100|AAF56687.2| 366|Drosophila melanogaster CG5930-PA,
isoform A protein.
Length = 366
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = -2
Query: 350 LLSLPGLGKAITLPNFQIPGKCPVDRMELNXRVIYDTTVSGKWKKAREGIPSSPGALRLF 171
L S G+ + N +P K V+ N ++ T+ + +K ++ S G++ +
Sbjct: 111 LKSSAGMAAGSGIRNGLVPIKQEVNSQ--NPPPLHPTSAASMMQKQQQAASSGQGSIPIV 168
Query: 170 IRLMMRRNSLGVMRSPSPNGGTGEESRLXTL 78
L R + PSP G ESR+ T+
Sbjct: 169 ATLDPNRIMPVNITLPSPAGSASSESRVLTI 199
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,211,443
Number of Sequences: 53049
Number of extensions: 669547
Number of successful extensions: 1926
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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