Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1822
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         27   0.89 
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     27   0.89 
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     27   0.89 
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     27   0.89 
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    24   4.8  
AY825679-1|AAV70242.1|  158|Anopheles gambiae olfactory receptor...    24   6.3  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 595 NSFQSLFKYEIYYYT-SINTKNVCGKIYNQYTYVLTYV*FRFIINKLP-DDIYNNLI 759
           N F  + ++  YY T +   K     IYN+     TY  F F+ N    D  Y N+I
Sbjct: 73  NDFAQVAEFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMI 129


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 595 NSFQSLFKYEIYYYT-SINTKNVCGKIYNQYTYVLTYV*FRFIINKLP-DDIYNNLI 759
           N F  + ++  YY T +   K     IYN+     TY  F F+ N    D  Y N+I
Sbjct: 73  NDFAQVAEFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMI 129


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 595 NSFQSLFKYEIYYYT-SINTKNVCGKIYNQYTYVLTYV*FRFIINKLP-DDIYNNLI 759
           N F  + ++  YY T +   K     IYN+     TY  F F+ N    D  Y N+I
Sbjct: 73  NDFAQVAEFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMI 129


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 595 NSFQSLFKYEIYYYT-SINTKNVCGKIYNQYTYVLTYV*FRFIINKLP-DDIYNNLI 759
           N F  + ++  YY T +   K     IYN+     TY  F F+ N    D  Y N+I
Sbjct: 73  NDFAQVAEFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMI 129


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 499 IFNSKMCPWNVYNSIRSVSLLLIAIYFCLD 588
           IFN+ +  ++V    RS+  L+I +Y C D
Sbjct: 140 IFNNILMDFSVEQINRSIQELMIYLYNCTD 169


>AY825679-1|AAV70242.1|  158|Anopheles gambiae olfactory receptor
           GPRor70 protein.
          Length = 158

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 538 SIRSVSLLLIAIY--FCLDFNNSFQSLFKYEIYYY 636
           ++ ++ +L   +Y  F  + N    SLF YE+ YY
Sbjct: 45  TLATIVVLAFGLYPLFAYNVNGVVMSLFLYELPYY 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,431
Number of Sequences: 2352
Number of extensions: 17257
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)