Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1818
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 182 2e-46
06_01_0427 - 3054204-3054614 182 2e-46
06_01_0425 - 3045557-3046004,3046852-3046856 182 2e-46
06_01_0423 - 3039527-3039937 182 2e-46
05_04_0449 - 21355439-21355849 182 2e-46
04_03_0909 + 20748653-20749063 182 2e-46
01_06_1456 + 37507156-37507566 182 2e-46
06_01_0217 - 1644696-1645034,1645143-1645214 179 2e-45
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 179 2e-45
11_01_0348 - 2607315-2607424,2608634-2609030 177 1e-44
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 165 3e-41
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 164 8e-41
12_02_0048 - 12852335-12852745 162 3e-40
12_02_0047 - 12836779-12837189 149 2e-36
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 116 2e-26
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 107 1e-23
09_04_0353 + 16915618-16916934 29 3.0
01_06_0746 - 31636024-31641396 24 7.0
03_06_0244 + 32613914-32614666 28 9.1
>06_01_0428 + 3055163-3055573
Length = 136
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 49 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 108
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 109 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0423 - 3039527-3039937
Length = 136
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 182 bits (444), Expect = 2e-46
Identities = 89/102 (87%), Positives = 95/102 (93%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 179 bits (436), Expect = 2e-45
Identities = 89/102 (87%), Positives = 94/102 (92%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQ
Sbjct: 35 GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 179 bits (436), Expect = 2e-45
Identities = 89/102 (87%), Positives = 94/102 (92%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQ
Sbjct: 49 GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQ 108
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 109 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 177 bits (430), Expect = 1e-44
Identities = 86/99 (86%), Positives = 92/99 (92%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQ
Sbjct: 35 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 443
EA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 95 EAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 165 bits (401), Expect = 3e-41
Identities = 81/102 (79%), Positives = 91/102 (89%)
Frame = -2
Query: 742 LGSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGAL 563
+G ++ PGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ AL
Sbjct: 109 IGVKKPRRHRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLAL 168
Query: 562 QEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 437
QEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 169 QEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 210
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 164 bits (398), Expect = 8e-41
Identities = 81/101 (80%), Positives = 90/101 (89%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQ
Sbjct: 14 GVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMRFQSHAVLALQ 73
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 437
EA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 74 EAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>12_02_0048 - 12852335-12852745
Length = 136
Score = 162 bits (393), Expect = 3e-40
Identities = 79/102 (77%), Positives = 90/102 (88%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ PGTVALREIR YQKSTELLIRKLPFQRLV+EIAQD ++ +RFQS+A+ ALQ
Sbjct: 35 GLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVALQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+E YLVGLF+DTNLC IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 95 EAAETYLVGLFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136
>12_02_0047 - 12836779-12837189
Length = 136
Score = 149 bits (362), Expect = 2e-36
Identities = 74/102 (72%), Positives = 84/102 (82%)
Frame = -2
Query: 739 GSQEAXSLXPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 560
G ++ P VALREIR YQKSTELLIRKLPFQRLV+EI QD ++ +RFQS+A+ LQ
Sbjct: 35 GLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRFQSSAMAVLQ 94
Query: 559 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
EA+E YLVGLFEDTNLC IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 95 EAAETYLVGLFEDTNLCVIHAKRVTIMPKDIQLARCIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 116 bits (280), Expect = 2e-26
Identities = 61/93 (65%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -2
Query: 712 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQEASEAYLV 536
PGTVALREIR++QK+TELLI PF RLVREI + D+ R+ A+ ALQEA+E +LV
Sbjct: 52 PGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLV 111
Query: 535 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 437
+FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 112 DIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 144
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 107 bits (256), Expect = 1e-23
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = -2
Query: 601 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 434
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 106
>09_04_0353 + 16915618-16916934
Length = 438
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 440 FTTDSSSKLNILRHDGHTFGVNSTQVGV 523
F DS+S +L ++ TFG NST+V V
Sbjct: 163 FYGDSASSAGVLANETFTFGTNSTRVAV 190
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 292 YATMKYENDVFHQNSVIGLLAKPR 221
+ +++YENDV+ N GL +PR
Sbjct: 1035 FGSVQYENDVYPMNG--GLSQRPR 1056
Score = 22.6 bits (46), Expect(2) = 7.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 223 RYGHVILCKVH*SQKKPMD 167
+Y +V+ C+++ +QKK D
Sbjct: 1081 KYTYVVACQIYGNQKKAKD 1099
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 558 SWRAPMAADWKRKSVLKS*AISLTRRWKGSLRISNSVD 671
SW A WK +V + + RRWK S+ S+D
Sbjct: 207 SWARHQAMQWKASAVSRLVPAAHRRRWKASVVSRRSLD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,340,283
Number of Sequences: 37544
Number of extensions: 311931
Number of successful extensions: 695
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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