Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1816
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 395 e-110
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 395 e-110
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 241 4e-88
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 301 2e-82
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 223 1e-58
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 223 1e-58
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 209 2e-54
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 134 6e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 96 3e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 96 3e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 96 3e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 94 8e-20
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 94 8e-20
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 9e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 46 3e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 44 2e-04
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 40 0.002
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.010
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 36 0.031
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 35 0.054
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 35 0.054
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.38
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 29 2.7
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 29 2.7
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 29 2.7
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.7
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.7
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 2.7
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 2.7
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.7
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 395 bits (972), Expect = e-110
Identities = 187/215 (86%), Positives = 196/215 (91%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 392
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 393 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 573 IGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMA 677
IGYNP AV FVPISG++GDNMLE S+ MP +G A
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 658 PWFKGWQVERKEXKADGKCLIEALDAIL 741
PWFKGW VERKE A GK L+EALD+I+
Sbjct: 209 PWFKGWAVERKEGNASGKTLLEALDSII 236
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 395 bits (972), Expect = e-110
Identities = 187/215 (86%), Positives = 196/215 (91%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 392
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 393 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 573 IGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMA 677
IGYNP AV FVPISG++GDNMLE S+ MP +G A
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 658 PWFKGWQVERKEXKADGKCLIEALDAIL 741
PWFKGW VERKE A GK L+EALD+I+
Sbjct: 209 PWFKGWAVERKEGNASGKTLLEALDSII 236
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 241 bits (591), Expect(2) = 4e-88
Identities = 111/117 (94%), Positives = 114/117 (97%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 383
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 101 bits (242), Expect(2) = 4e-88
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = +3
Query: 474 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 653
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 654 MPLVQGMA 677
MP +G A
Sbjct: 174 MPWFKGWA 181
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 658 PWFKGWQVERKEXKADGKCLIEALDAIL 741
PWFKGW VERKE A GK L+EALD+I+
Sbjct: 175 PWFKGWAVERKEGNASGKTLLEALDSII 202
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 301 bits (740), Expect = 2e-82
Identities = 146/172 (84%), Positives = 153/172 (88%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 392
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 393 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 548
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 223 bits (544), Expect = 1e-58
Identities = 106/201 (52%), Positives = 146/201 (72%), Gaps = 1/201 (0%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKL 221
+K IN++V+GHVD+GKST GHL++ +D RT KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 222 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 401
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 402 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 578
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 579 YNPAAVAFVPISGWHGDNMLE 641
++ FVP+SG+ G+N+++
Sbjct: 345 FSKP--KFVPVSGFTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 223 bits (544), Expect = 1e-58
Identities = 106/201 (52%), Positives = 146/201 (72%), Gaps = 1/201 (0%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKL 221
+K IN++V+GHVD+GKST GHL++ +D RT KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 222 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 401
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 402 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 578
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 579 YNPAAVAFVPISGWHGDNMLE 641
++ FVP+SG+ G+N+++
Sbjct: 363 FSKP--KFVPVSGFTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 209 bits (510), Expect = 2e-54
Identities = 94/198 (47%), Positives = 137/198 (69%), Gaps = 1/198 (0%)
Frame = +3
Query: 36 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLD 215
G K HIN+V +GHVD+GKST G L++ G +DKRT K+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 216 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 395
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 396 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 575
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 576 GYNPAA-VAFVPISGWHG 626
G+NP + +VP SG G
Sbjct: 284 GFNPKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 134 bits (324), Expect = 6e-32
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAER 233
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 95.9 bits (228), Expect = 3e-20
Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDK 218
++K H+N+ IGHVD GK+T T I K K K+ K +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS-AITKILATSKGA--KYRKYED------------IDN 89
Query: 219 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 398
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 399 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 573 IGY 581
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 95.9 bits (228), Expect = 3e-20
Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDK 218
++K H+N+ IGHVD GK+T T I K K K+ K +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS-AITKILATSKGA--KYRKYED------------IDN 90
Query: 219 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 398
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 399 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 573 IGY 581
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 95.9 bits (228), Expect = 3e-20
Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDK 218
++K H+N+ IGHVD GK+T T I K K K+ K +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS-AITKILATSKGA--KYRKYED------------IDN 90
Query: 219 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 398
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 399 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 573 IGY 581
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 94.3 bits (224), Expect = 8e-20
Identities = 64/187 (34%), Positives = 94/187 (50%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLK 224
K ++N+ IGH+D GK+T T + KF++ +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDE---------------IDKGK 87
Query: 225 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 404
E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 405 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 584
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Query: 585 PAAVAFV 605
A +
Sbjct: 197 GDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 94.3 bits (224), Expect = 8e-20
Identities = 64/187 (34%), Positives = 94/187 (50%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLK 224
K ++N+ IGH+D GK+T T + KF++ +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDE---------------IDKGK 87
Query: 225 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 404
E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 405 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 584
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Query: 585 PAAVAFV 605
A +
Sbjct: 197 GDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 237 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 416
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 417 KNGQTREHALLAFTLGVKQLIVGVNKMD 500
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 237 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 416
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 417 KNGQTREHALLAFTLGVKQLIVGVNKMD 500
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 237 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 395
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 9e-06
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 180 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 356
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 357 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 500
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 9e-06
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 60 IVVIGHVDSGKST 98
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 46.0 bits (104), Expect = 3e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTXXKF---EKEAQE----MGK 185
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 186 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 353
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 354 QADCAVLIVAAGTG 395
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 45.6 bits (103), Expect = 4e-05
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAER 233
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 234 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 410
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 411 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--N 584
I QT EH LLA ++I+ +NK D E + + E K+V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 585 PAAVAFVPISGWHGDNMLE 641
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 45.6 bits (103), Expect = 4e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTXXKF---EKEAQE----MGK 185
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 186 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 353
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 354 QADCAVLIVAAGTG 395
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 43.6 bits (98), Expect = 2e-04
Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Frame = +3
Query: 9 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTXXKFEKEAQEM 179
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 180 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 341
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244
Query: 342 TGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 515
G + D +L++ A G G T+EH LA +L V +V V K+D
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAN 296
Query: 516 YSEPRFEEIKKEVSS 560
E + I + V S
Sbjct: 297 ILEETMKNITRLVRS 311
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 12/208 (5%)
Frame = +3
Query: 9 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTXXKFEKEAQEM 179
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 180 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 341
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244
Query: 342 TGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 512
G + + +L++ A G G T+EH LA +L V +V V K+D P
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMC-P 295
Query: 513 PYSEPRFEEIKKEVSSYIKKIGYNPAAV 596
Y EE K ++ ++ P V
Sbjct: 296 AYI---LEETMKNITRLVRSAKKLPILV 320
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 39 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLD 215
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 216 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 380
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 39 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLD 215
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 216 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 380
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 288 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 467
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 468 KQLIVGVNKMDSTEPPYSEPRFEEI 542
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 35.9 bits (79), Expect = 0.031
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKA 227
+ + V+G D GKST G L C G K F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 228 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 389
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 390 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 569
+ GI+ TREH L L + ++ + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 570 KIG 578
K G
Sbjct: 334 KAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 35.1 bits (77), Expect = 0.054
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 237 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 395
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 35.1 bits (77), Expect = 0.054
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAERE 236
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 237 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 395
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 493 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 365
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 297 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 476
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 477 IVGVNKMDSTEPPYSEPR 530
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 704 SALXSLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 582
S+ S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 2 SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 42
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 704 SALXSLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 582
S+ S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 35 SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 75
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 704 SALXSLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 582
S+ S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 35 SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 75
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 556 PHTSRRLATTQLLSLSCPFLD 618
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 556 PHTSRRLATTQLLSLSCPFLD 618
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.5 bits (63), Expect = 2.7
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Frame = +3
Query: 321 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 488
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 489 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 638
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 639 EPSTKMPLVQG 671
+P + M + +G
Sbjct: 565 DPISSMNIGRG 575
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.5 bits (63), Expect = 2.7
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Frame = +3
Query: 321 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 488
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 489 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 638
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 639 EPSTKMPLVQG 671
+P + M + +G
Sbjct: 590 DPISSMNIGRG 600
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 556 PHTSRRLATTQLLSLSCPFLD 618
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 556 PHTSRRLATTQLLSLSCPFLD 618
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTT 104
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 476 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 318
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 317 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 198
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 291 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 386
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,294,363
Number of Sequences: 27780
Number of extensions: 365614
Number of successful extensions: 1078
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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