Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1816
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 429 e-122
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 419 e-119
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 316 2e-88
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 283 2e-78
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 38 1e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.0
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 5.3
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 5.3
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 5.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 429 bits (1058), Expect = e-122
Identities = 204/213 (95%), Positives = 206/213 (96%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 392
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 393 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Query: 573 IGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQG 671
IGYNPAAVAFVPISGWHGDNMLE S+KMP +G
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 213
Score = 59.7 bits (138), Expect = 3e-11
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 652 KCPWFKGWQVERKEXKADGKCLIEALDAIL 741
K PWFKGW VERKE K +GKCLIEALDAIL
Sbjct: 207 KMPWFKGWTVERKEGKVEGKCLIEALDAIL 236
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 419 bits (1031), Expect = e-119
Identities = 198/213 (92%), Positives = 202/213 (94%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 213 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 392
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 393 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 572
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 573 IGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQG 671
IGYN A+VAFVPISGWHGDNMLEPS K P +G
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKG 213
Score = 58.0 bits (134), Expect = 9e-11
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 649 PKCPWFKGWQVERKEXKADGKCLIEALDAIL 741
PK PW+KGW+VERK+ ADGK LIEALDAIL
Sbjct: 206 PKTPWYKGWKVERKDGNADGKTLIEALDAIL 236
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 316 bits (775), Expect = 2e-88
Identities = 150/156 (96%), Positives = 152/156 (97%)
Frame = +3
Query: 204 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 383
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 384 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 563
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 564 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQG 671
IKKIGYNPAAVAFVPISGWHGDNMLE S+KMP +G
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 156
Score = 59.7 bits (138), Expect = 3e-11
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 652 KCPWFKGWQVERKEXKADGKCLIEALDAIL 741
K PWFKGW VERKE K +GKCLIEALDAIL
Sbjct: 150 KMPWFKGWTVERKEGKVEGKCLIEALDAIL 179
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 283 bits (693), Expect = 2e-78
Identities = 134/140 (95%), Positives = 136/140 (97%)
Frame = +3
Query: 252 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 431
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 432 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 611
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 612 SGWHGDNMLEPSTKMPLVQG 671
SGWHGDNMLE S+KMP +G
Sbjct: 121 SGWHGDNMLEVSSKMPWFKG 140
Score = 59.7 bits (138), Expect = 3e-11
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 652 KCPWFKGWQVERKEXKADGKCLIEALDAIL 741
K PWFKGW VERKE K +GKCLIEALDAIL
Sbjct: 134 KMPWFKGWTVERKEGKVEGKCLIEALDAIL 163
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 37.5 bits (83), Expect = 1e-04
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = +3
Query: 291 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 470
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 471 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 641
+IV +NK+D + ++E K + I+++G + V IS G N+ E
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRE 298
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKST 98
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 54 INIVVIGHVDSGKST 98
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 276 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 377
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 276 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 377
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 135 DKRTXXKFEKEAQEMG 182
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 135 DKRTXXKFEKEAQEMG 182
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 135 DKRTXXKFEKEAQEMG 182
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 653 FG*RLQHVVSVPSRNGHESDSSWV 582
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 496 WIPLNHHTVSPDLRKSRRKY 555
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,086
Number of Sequences: 438
Number of extensions: 4481
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -