Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1815
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    29   0.043
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.7  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 29.1 bits (62), Expect = 0.043
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 764 LQDVYKIGGIGT 799
           LQDVYKIGGIGT
Sbjct: 1   LQDVYKIGGIGT 12


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 192 LDKLKAERERGITIDIALWKFETSKYYVTII 284
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 192 LDKLKAERERGITIDIALWKFETSKYYVTII 284
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -3

Query: 723 QNGIESFNEAFSVSF----AFLTLHLPSLEPKAFWLK 625
           +N ++ FN+ F +SF    ++ TLH  +     F+ +
Sbjct: 190 KNTVDDFNDIFGISFLLIISYSTLHFVNYIDDLFFFR 226


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 562 TTQLLSLSCPFLDGTETTCWSLQPKCLGFKGWQV 663
           T QLLSL C F      T  S++P     KG+ +
Sbjct: 2   TIQLLSLICKFGGWMGLTPVSVEPTGFSPKGYSL 35


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = -3

Query: 645 PKAFWLKAPTCCLRAIQKWARKRQQLGCSQSS*CMRIL 532
           P     ++  CC  A+      RQ +  S+   C+R +
Sbjct: 605 PHRLAARSRRCCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = -3

Query: 645 PKAFWLKAPTCCLRAIQKWARKRQQLGCSQSS*CMRIL 532
           P     ++  CC  A+      RQ +  S+   C+R +
Sbjct: 497 PHRLAARSRRCCYHAVAPGTDIRQSIALSRKKKCIRYM 534


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 584  ESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 456
            +S  ++ + N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1267 QSVFAFFMMNALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 584  ESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 456
            +S  ++ + N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1267 QSVFAFFMMNALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 710 SMPFWPPARPTDK 748
           S+  WPPA  TD+
Sbjct: 338 SLRLWPPAPQTDR 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,928
Number of Sequences: 336
Number of extensions: 4375
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)