Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1815
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    28   0.39 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.6  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   3.6  
EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.          24   4.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.3  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 0.39
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 656 GRWSVRXAKLTENASLKLSMPFWPPARPTDKPLRL 760
           GRW    +      S       WP +RPT KP RL
Sbjct: 266 GRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRL 300


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 686  TENASLKLSMPFWPPARPTDKPLRL 760
            T++  L+L++P++  ++P   PLRL
Sbjct: 1133 TKSEELQLTVPYYAQSQPQGSPLRL 1157


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 572  SWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 456
            ++V+AN L V   FLL   K  L + W+  +    S+DE
Sbjct: 927  AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 518  GNQEGSILIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQN 637
            G Q  +  I  + WLQ    + RA     RR+H  +F+ N
Sbjct: 982  GRQFSNEGISGQSWLQLQQQKLRARREQQRREHSNSFSYN 1021


>EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 738 PLTSPCVFPCKTYTKSGVLVP 800
           P  +PC+ PCK + +    +P
Sbjct: 20  PQQNPCLCPCKPFEEKEYFIP 40


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 492 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 584
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,792
Number of Sequences: 2352
Number of extensions: 19363
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)