Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1815
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 429 e-122
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 418 e-119
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 318 3e-89
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 285 2e-79
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 38 1e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 7.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 7.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 429 bits (1056), Expect = e-122
Identities = 202/208 (97%), Positives = 204/208 (98%)
Frame = +3
Query: 21 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 200
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 201 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 380
LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 122
Query: 381 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 560
FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIG
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 182
Query: 561 YNPAAVAFVPISGWHGDNMLEPSTKMPW 644
YNPAAVAFVPISGWHGDNMLE S+KMPW
Sbjct: 183 YNPAAVAFVPISGWHGDNMLEVSSKMPW 210
Score = 50.8 bits (116), Expect = 1e-08
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 646 FKGWQVERKEXKADGKCLIEALDAIL 723
FKGW VERKE K +GKCLIEALDAIL
Sbjct: 211 FKGWTVERKEGKVEGKCLIEALDAIL 236
Score = 50.4 bits (115), Expect = 2e-08
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 725 PPARPTDKPLRLSLQDVYKIGGIGT 799
PP RPTDK LRL LQDVYKIGGIGT
Sbjct: 237 PPTRPTDKALRLPLQDVYKIGGIGT 261
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 418 bits (1029), Expect = e-119
Identities = 196/208 (94%), Positives = 200/208 (96%)
Frame = +3
Query: 21 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 200
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 201 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 380
LKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGE 122
Query: 381 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 560
FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIG
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIG 182
Query: 561 YNPAAVAFVPISGWHGDNMLEPSTKMPW 644
YN A+VAFVPISGWHGDNMLEPS K PW
Sbjct: 183 YNTASVAFVPISGWHGDNMLEPSPKTPW 210
Score = 50.8 bits (116), Expect = 1e-08
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 725 PPARPTDKPLRLSLQDVYKIGGIGT 799
PP+RPTDK LRL LQDVYKIGGIGT
Sbjct: 237 PPSRPTDKALRLPLQDVYKIGGIGT 261
Score = 48.8 bits (111), Expect = 6e-08
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 631 PKCLGFKGWQVERKEXKADGKCLIEALDAIL 723
PK +KGW+VERK+ ADGK LIEALDAIL
Sbjct: 206 PKTPWYKGWKVERKDGNADGKTLIEALDAIL 236
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 318 bits (782), Expect = 3e-89
Identities = 150/153 (98%), Positives = 151/153 (98%)
Frame = +3
Query: 186 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 365
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 366 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 545
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 546 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPW 644
IKKIGYNPAAVAFVPISGWHGDNMLE S+KMPW
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPW 153
Score = 50.8 bits (116), Expect = 1e-08
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 646 FKGWQVERKEXKADGKCLIEALDAIL 723
FKGW VERKE K +GKCLIEALDAIL
Sbjct: 154 FKGWTVERKEGKVEGKCLIEALDAIL 179
Score = 50.4 bits (115), Expect = 2e-08
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 725 PPARPTDKPLRLSLQDVYKIGGIGT 799
PP RPTDK LRL LQDVYKIGGIGT
Sbjct: 180 PPTRPTDKALRLPLQDVYKIGGIGT 204
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 285 bits (700), Expect = 2e-79
Identities = 134/137 (97%), Positives = 135/137 (98%)
Frame = +3
Query: 234 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 413
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 414 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 593
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 594 SGWHGDNMLEPSTKMPW 644
SGWHGDNMLE S+KMPW
Sbjct: 121 SGWHGDNMLEVSSKMPW 137
Score = 50.8 bits (116), Expect = 1e-08
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 646 FKGWQVERKEXKADGKCLIEALDAIL 723
FKGW VERKE K +GKCLIEALDAIL
Sbjct: 138 FKGWTVERKEGKVEGKCLIEALDAIL 163
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 37.5 bits (83), Expect = 1e-04
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = +3
Query: 273 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 452
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 453 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 623
+IV +NK+D + ++E K + I+++G + V IS G N+ E
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRE 298
Score = 25.4 bits (53), Expect = 0.62
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 27 KTHINIVVIGHVDSGKST 80
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 36 INIVVIGHVDSGKST 80
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 258 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 359
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 258 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 359
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 701 LKLSMPFWPPARPTDKP 751
L+ + PFW P++ D P
Sbjct: 236 LRQAFPFWLPSKEYDLP 252
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 701 LKLSMPFWPPARPTDKP 751
L+ + PFW P++ D P
Sbjct: 236 LRQAFPFWLPSKEYDLP 252
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,990
Number of Sequences: 438
Number of extensions: 5375
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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