Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1814
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068580-1|AAH68580.1|  738|Homo sapiens MGC24039 protein protein.     31   3.7  
AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens ...    31   3.7  
BC040272-1|AAH40272.1|  454|Homo sapiens IL16 protein protein.         31   4.8  
AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16 p...    31   4.8  
AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens ...    31   4.8  
AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens ...    31   4.8  
BC035246-1|AAH35246.2|  817|Homo sapiens KIAA1666 protein protein.     31   6.4  
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei...    30   8.5  
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.     30   8.5  

>BC068580-1|AAH68580.1|  738|Homo sapiens MGC24039 protein protein.
          Length = 738

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 45  SPEYRKFPXQVSGEYPGPIYDNPSDHDNLKLITDPSLVSHVSKL--LVPGFQEFTLTDKD 218
           SP  R F  +V   YP  I  NP D D + ++  P  +S  ++     P F  F +T +D
Sbjct: 71  SPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITRED 130

Query: 219 VSCTF 233
            S T+
Sbjct: 131 GSRTY 135


>AK125323-1|BAC86129.1| 1309|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43333 fis, clone NT2RI3006376. ).
          Length = 1309

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 45  SPEYRKFPXQVSGEYPGPIYDNPSDHDNLKLITDPSLVSHVSKL--LVPGFQEFTLTDKD 218
           SP  R F  +V   YP  I  NP D D + ++  P  +S  ++     P F  F +T +D
Sbjct: 84  SPLKRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITRED 143

Query: 219 VSCTF 233
            S T+
Sbjct: 144 GSRTY 148


>BC040272-1|AAH40272.1|  454|Homo sapiens IL16 protein protein.
          Length = 454

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +3

Query: 132 KLITDPSLVSHVSKLLVPGFQEFTLTDKDVSCTFRARLNYGIGETFPHFRAVVQDGANIY 311
           +L   PSL SH+S  L       T   KD S       +  I    P++R +V+      
Sbjct: 302 RLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQKE 361

Query: 312 AHREIGVAACSV 347
           A   +G+  CSV
Sbjct: 362 AGVGLGIGLCSV 373


>AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16
           precursor protein protein.
          Length = 1332

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +3

Query: 132 KLITDPSLVSHVSKLLVPGFQEFTLTDKDVSCTFRARLNYGIGETFPHFRAVVQDGANIY 311
           +L   PSL SH+S  L       T   KD S       +  I    P++R +V+      
Sbjct: 302 RLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQKE 361

Query: 312 AHREIGVAACSV 347
           A   +G+  CSV
Sbjct: 362 AGVGLGIGLCSV 373


>AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16759 fis, clone BRACE3046450, highly  similar
           to Interleukin-16 precursor. ).
          Length = 1331

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +3

Query: 132 KLITDPSLVSHVSKLLVPGFQEFTLTDKDVSCTFRARLNYGIGETFPHFRAVVQDGANIY 311
           +L   PSL SH+S  L       T   KD S       +  I    P++R +V+      
Sbjct: 302 RLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQKE 361

Query: 312 AHREIGVAACSV 347
           A   +G+  CSV
Sbjct: 362 AGVGLGIGLCSV 373


>AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42574 fis, clone BRACE3008137, highly  similar
           to Interleukin-16 precursor. ).
          Length = 1163

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +3

Query: 132 KLITDPSLVSHVSKLLVPGFQEFTLTDKDVSCTFRARLNYGIGETFPHFRAVVQDGANIY 311
           +L   PSL SH+S  L       T   KD S       +  I    P++R +V+      
Sbjct: 134 RLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQKE 193

Query: 312 AHREIGVAACSV 347
           A   +G+  CSV
Sbjct: 194 AGVGLGIGLCSV 205


>BC035246-1|AAH35246.2|  817|Homo sapiens KIAA1666 protein protein.
          Length = 817

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +1

Query: 352 LVLITSLKAAEEDINMKKRTLKLKIWQSR*QH 447
           LV+  +LKAAEE++  +KR L L++W S+  H
Sbjct: 644 LVMSANLKAAEEELVFQKRQL-LRVWGSQDTH 674


>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
           protein.
          Length = 1287

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +3

Query: 45  SPEYRKFPXQVSGEYPGPIYDNPSDHDNLKLITDPSLVSHVSKL--LVPGFQEFTLTDKD 218
           +P  R F  +V   YP  +  NP D D + ++  P  ++  ++     P F  F +T +D
Sbjct: 67  TPLRRTFKSKVLARYPENVEWNPFDQDAVGMLCMPKGLAFKTQADPREPQFHAFIITRED 126

Query: 219 VSCTFRARLNY 251
            S TF   L +
Sbjct: 127 GSRTFGFALTF 137


>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
          Length = 1359

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +3

Query: 45  SPEYRKFPXQVSGEYPGPIYDNPSDHDNLKLITDPSLVSHVSKL--LVPGFQEFTLTDKD 218
           +P  R F  +V   YP  +  NP D D + ++  P  ++  ++     P F  F +T +D
Sbjct: 139 TPLRRTFKSKVLARYPENVEWNPFDQDAVGMLCMPKGLAFKTQADPREPQFHAFIITRED 198

Query: 219 VSCTFRARLNY 251
            S TF   L +
Sbjct: 199 GSRTFGFALTF 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,547,333
Number of Sequences: 237096
Number of extensions: 2501796
Number of successful extensions: 6058
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6054
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)