Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1809
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 42 7e-04
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 42 7e-04
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 42 7e-04
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 42 7e-04
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 42 7e-04
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 42 7e-04
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 42 7e-04
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 42 7e-04
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 42 7e-04
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 31 1.3
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 31 1.3
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical ... 29 2.9
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 29 3.9
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 3.9
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 29 3.9
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 29 3.9
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 3.9
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 5.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 5.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 6.8
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 28 6.8
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 28 6.8
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 28 6.8
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 28 6.8
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 28 6.8
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 28 6.8
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 28 6.8
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 6.8
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 6.8
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 6.8
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 6.8
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 6.8
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 6.8
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 8.9
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 28 8.9
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 8.9
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 360 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 402
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 359 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 401
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 362 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 404
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 359 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 401
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 360 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 402
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 362 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 404
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 359 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 401
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 360 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 402
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
L EA + I LE QLKQLQ AK+ LE+++ EL ++ +L+ K
Sbjct: 359 LAEAHNTIHSLEAQLKQLQLAKQALEQKEYELRELTAQLQSEK 401
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein
F09C3.1 protein.
Length = 1391
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 425 RRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLN 547
R +EQ K + A K +L ++ ELH+ + R EE T L N
Sbjct: 1221 RERQEQKKSIAATKRKLMEQREELHEKLARYEEYLETCLQN 1261
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 413 QDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLE 520
++ + R E+Q+K+LQ EE+ ++Q EL +LE
Sbjct: 985 KETVERFEKQIKKLQTKGEEMTKKQSELSAAETKLE 1020
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYL 541
+EAQ I++ EQLK LQA+ E+ +R+ ++ D L + KV L
Sbjct: 565 IEAQKTIKKQSEQLKILQASLEDTQRQLQQVLD-QYALAQRKVAAL 609
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYL 541
+EAQ I++ EQLK LQA+ E+ +R+ ++ D L + KV L
Sbjct: 565 IEAQKTIKKQSEQLKILQASLEDTQRQLQQVLD-QYALAQRKVAAL 609
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYL 541
+EAQ I++ EQLK LQA+ E+ +R+ ++ D L + KV L
Sbjct: 581 IEAQKTIKKQSEQLKILQASLEDTQRQLQQVLD-QYALAQRKVAAL 625
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
++ +LEA++ ++ EE + K +LER + EL +++ + +LNK
Sbjct: 177 LERKVLEAEESRKKFEEDRLAMLEQKSQLERDRAELARQKSDMKKNEQQAILNK 230
>AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical
protein K12H6.11 protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 109 ESAQIWENETKLLDVNSRDPSKSPLKKISV 20
E+ + EN K + NSRDPS+ P KK SV
Sbjct: 363 EAVKKLENAVKRILKNSRDPSEPPSKKKSV 392
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +2
Query: 359 GHNSGNVYCMMQANLLEAQDMI-------RRLEEQLKQLQAAKEELERRQGELHDMMQRL 517
GH+S +V M + L A+D+I +LE+Q+K+L EEL + +LH+ +
Sbjct: 110 GHDSTSVKVMYETELRSAKDLIADSDKERAQLEDQIKKL---VEELNNYRNKLHEAERGA 166
Query: 518 EETK 529
+ T+
Sbjct: 167 DVTR 170
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 425 RRLEEQLKQLQAAKEELERRQGELHDMMQRLE 520
+ LE +A KEEL RQ E HD +Q L+
Sbjct: 289 KELEALRDHEEALKEELLARQDEFHDRLQELQ 320
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +2
Query: 359 GHNSGNVYCMMQANLLEAQDMI-------RRLEEQLKQLQAAKEELERRQGELHDMMQRL 517
GH+S +V M + L A+D+I +LE+Q+K+L EEL + +LH+ +
Sbjct: 91 GHDSTSVKVMYETELRSAKDLIADSDKERAQLEDQIKKL---VEELNNYRNKLHEAERGA 147
Query: 518 EETK 529
+ T+
Sbjct: 148 DVTR 151
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/53 (26%), Positives = 33/53 (62%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNKKQSL 562
++AQ +++L +Q+KQLQ ++ +RR+ E+ + E+ ++ L++ + L
Sbjct: 153 VDAQKNLKKLFDQVKQLQGQVDDEQRRREEIRENYLAAEK-RLAIALSESEDL 204
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 353 SGGHNSGNVYCMMQANLLEAQD-MIRRLEEQLKQLQAAKEELERR 484
SG HN GNV + Q + L Q+ +++L++Q K L+ + EL R+
Sbjct: 12 SGAHNRGNVDALSQKDALYHQEKFVKKLQKQ-KFLENKEIELARQ 55
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +2
Query: 431 LEEQLKQLQAAKEEL---ERRQGELHDMMQRLEE 523
+ E KQ++AAK+EL E+ + EL + M RL++
Sbjct: 291 ISEITKQMEAAKKELEASEKEKSELREQMDRLQK 324
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 353 SGGHNSGNVYCMMQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELH-DMMQRLEETK 529
SG +S +M+ + E +L EQ KQ A + E R+ H + MQR K
Sbjct: 2517 SGPVSSETRQQIMEQQMREKLAAHHQLVEQQKQRDAREREAREREAREHQERMQREAYMK 2576
Query: 530 VTYLLNKKQSL 562
LL +K+++
Sbjct: 2577 EQQLLERKRAI 2587
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +2
Query: 431 LEEQLKQLQAAKEEL---ERRQGELHDMMQRLEE 523
+ E KQ++AAK+EL E+ + EL + M RL++
Sbjct: 291 ISEITKQMEAAKKELEASEKEKSELREQMDRLQK 324
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 386 MMQANLLEAQDMI-RRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
M QA L ++++ ++L+EQ + +A E +ER+Q M+Q+LEE K
Sbjct: 1107 MEQAKRLREEELLEKQLQEQEIEEKARNEMIERKQ----KMLQQLEELK 1151
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3414 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 3462
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3414 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 3462
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 526
MQA +E + + R + ++++ E+LER + EL D +++ +T
Sbjct: 8 MQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQT 53
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3414 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 3462
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 404 LEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNK 550
L+ +D+ + LE ++ AK+E E GE+ + LEET+ L K
Sbjct: 3959 LKWEDIQKVLESLAFDMEVAKKEAENVGGEVEKWQRWLEETESALLSTK 4007
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQ-GELHDMMQRLEETKVTYLLNKKQSLFTVQN 577
++ ++++ ++EEQ K L+ +ELE+ + E H Q E T V + ++ S ++Q
Sbjct: 440 IVGGENLLEKVEEQAKLLEVNNKELEQSKFQEAHLRTQLEERTAVKVEIEERYS--SLQE 497
Query: 578 DSF 586
++F
Sbjct: 498 EAF 500
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 401 LLEAQDMIRRLEEQLKQLQAAKEELERRQ-GELHDMMQRLEETKVTYLLNKKQSLFTVQN 577
++ ++++ ++EEQ K L+ +ELE+ + E H Q E T V + ++ S ++Q
Sbjct: 442 IVGGENLLEKVEEQAKLLEVNNKELEQSKFQEAHLRTQLEERTAVKVEIEERYS--SLQE 499
Query: 578 DSF 586
++F
Sbjct: 500 EAF 502
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 389 MQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK 529
+Q+ L + Q ++ +L+ Q+K+L A +ELE + + E+ +
Sbjct: 1100 IQSRLEDEQSLVAKLQRQIKELLARIQELEEELDAERNSRSKAEKAR 1146
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +2
Query: 434 EEQLKQLQAAKEELERRQGELHDMMQRLEETKVTYLLNKKQSLFTVQND 580
EE+ ++ + +EE ER++ E+ ++M+R + + + K Q ++ND
Sbjct: 1006 EEKERKEREKREEKERKEREIREIMERKKREEDDRIAAKLQIAQQLEND 1054
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 443 LKQLQAAKEELERRQGELHDMMQR 514
LKQLQA K ELE G +H ++ R
Sbjct: 330 LKQLQAPKAELEEPNGWMHRIVTR 353
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 628 PTSKILIYKTILKPIWTYGIQLW 696
P+SKI YK I KPI+ LW
Sbjct: 3318 PSSKINAYKLIFKPIYDAWYHLW 3340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,724,403
Number of Sequences: 27780
Number of extensions: 352921
Number of successful extensions: 1348
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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