Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1803
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    27   0.51 
AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-l...    27   0.89 
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    26   1.2  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        25   2.7  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   4.8  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           24   4.8  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   4.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   4.9  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.3  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    23   8.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.3  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 14  TXPSPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVI 142
           T PSPGAF +   N S + P   G+ D      + + T++ +I
Sbjct: 15  TTPSPGAFQSLARNNSYVIP---GLYDLNVEDTNWVLTSSFII 54


>AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-like
           4 protein protein.
          Length = 161

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 21  RRLEHFIIFLEMLPQLLHPGTVYRILQLTQRAPSRPPQRSSELSL 155
           RRLE+ +  +  LP      T+Y++LQ       RP Q  S L++
Sbjct: 64  RRLENLLDLVRQLPARQDQRTLYQLLQ--PEIMKRPAQNQSTLAM 106


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 448 TGDHVAVPERIHLAPLVVEDTSQPAVQRAGLELETIS 338
           T  +VA P   + APL     SQPA+  A    +TIS
Sbjct: 123 TKTYVAQPALSYAAPLTKTYVSQPALSYAATVAKTIS 159


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 611 RKSXGGXFSTEMLARSNATSSGVVTA*GNKDHR 709
           RKS GG    + LAR  A  S   T    K HR
Sbjct: 7   RKSTGGKAPRKQLARKAARKSAPATGGVKKPHR 39


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 384 VNQQCRERGLSWRPSPTQR 328
           V+Q+C ERG+ + P P +R
Sbjct: 783 VSQKCAERGIIFAPMPGRR 801


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 533 LLARSRSQHLHMLFPIYQQLRERVHHPEY 447
           LL   +  H H   P  QQ    VHHP +
Sbjct: 115 LLNHHQHHHQHPHLPHVQQHHPSVHHPAH 143


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 59  STIAPSRHGVQDFTAHSASPITTTTTVIG 145
           +T+AP+   V   T  + +P TTTT   G
Sbjct: 34  TTVAPTTTTVAPTTTTTVAPTTTTTVAPG 62


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 59  STIAPSRHGVQDFTAHSASPITTTTTVIG 145
           +T+AP+   V   T  + +P TTTT   G
Sbjct: 34  TTVAPTTTTVAPTTTTTVAPTTTTTVAPG 62


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.0 bits (42), Expect(2) = 4.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 109 SEPHHDHHNGH 141
           S+ HH HH+ H
Sbjct: 181 SQHHHHHHHHH 191



 Score = 21.0 bits (42), Expect(2) = 4.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 118 HHDHHNGHRS 147
           HH HH+ H S
Sbjct: 186 HHHHHHPHHS 195


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 589 RNCYCGCT*KXG 624
           R+CYCGC  + G
Sbjct: 237 RSCYCGCQCRRG 248


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
 Frame = +2

Query: 395 YNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLRDAVDK 574
           Y +   + P   S ++ G  DG P+L   D  G  +     + G  A      L     +
Sbjct: 121 YTQSGGVRPFGVSLLICGWDDGRPYLFQCDPSGAYFAWKATAMGKNANNGKTFLEKRYSE 180

Query: 575 G-PLDQ--ETAIAVVRKSXGGXFSTE 643
              LD    TAI  +++   G  + +
Sbjct: 181 DLELDDAVHTAILTLKEGFEGQMNAD 206


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 97  YSSLSEPHHDHHNGH 141
           +S  + PHH HH+ H
Sbjct: 496 HSHHAHPHHHHHHHH 510


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,068
Number of Sequences: 2352
Number of extensions: 16484
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)