Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1796
(600 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 40 3e-04
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 37 0.003
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 36 0.003
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 36 0.005
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 35 0.010
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 33 0.032
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.056
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.097
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 31 0.17
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 31 0.17
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 30 0.22
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.30
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 29 0.39
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.39
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 0.69
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.69
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 28 0.91
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 28 0.91
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 1.2
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 1.6
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 1.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 1.6
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 2.1
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 2.1
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 27 2.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 3.7
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 4.8
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 4.8
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 26 4.8
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 26 4.8
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 4.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 6.4
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 25 6.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.4
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 8.5
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 25 8.5
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 8.5
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 25 8.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 25 8.5
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 8.5
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 39.9 bits (89), Expect = 3e-04
Identities = 25/140 (17%), Positives = 63/140 (45%)
Frame = +3
Query: 33 KDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 212
KD+ + EEE +L++ +TI ++L + L + + + ++ ++ +++ +
Sbjct: 360 KDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKD 419
Query: 213 RRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLK 392
+ ++ A AT KL+E + D + K E +++ N+LK
Sbjct: 420 KMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNELK 479
Query: 393 EARFLAEEADKKYDEVARKL 452
E L ++ D++ + + ++
Sbjct: 480 EKSALIDKKDQELNNLREQI 499
Score = 38.7 bits (86), Expect = 6e-04
Identities = 28/142 (19%), Positives = 60/142 (42%)
Frame = +3
Query: 27 QAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAA 206
Q DA + E+E + L+ I +N L + + QV+ +LEE +L +A ++A
Sbjct: 386 QLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAE 445
Query: 207 LNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQ 386
+N A L+ +S +E + +++ + ++ ++ L Q
Sbjct: 446 INSERDFQNKKIKDFEKIEQDLRACLNSSS---NELKEKSALIDKK----DQELNNLREQ 498
Query: 387 LKEARFLAEEADKKYDEVARKL 452
+KE + ++E + R +
Sbjct: 499 IKEQKKVSESTQSSLQSLQRDI 520
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +3
Query: 60 AEEEARQLQKKIQTIENELDQTQ-------ESLMQVNGKLEEKEKALQNAESEVAAL 209
+EE+ QKK+ +E+ Q L+ V KL++KEK + + +V+++
Sbjct: 178 SEEDVSYFQKKLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSI 234
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 36.7 bits (81), Expect = 0.003
Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 4/155 (2%)
Frame = +3
Query: 12 AMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT----QESLMQVNGKLEEKEKAL 179
A EQQ + E++ Q +++T+ENEL Q QE + Q + +E + +
Sbjct: 415 AELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQI 474
Query: 180 QNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADE 359
+++ AL + K S A +A D+ E+ + ++N++L
Sbjct: 475 LTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNLELA 534
Query: 360 ERMDALENQLKEARFLAEEADKKYDEVARKLAMVE 464
+ + + E + K + R+L +++
Sbjct: 535 DMILERDRARHELETMHRSQRDKQESTERELRLLQ 569
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 DRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQ 182
D+ E++ K+ NL E + + +++T+ QES + L+EK +L+
Sbjct: 517 DKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRDKQESTERELRLLQEKAASLE 576
Query: 183 -NAESEVAALNRR 218
N SEV+ L R
Sbjct: 577 RNKSSEVSNLLSR 589
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 36.3 bits (80), Expect = 0.003
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +3
Query: 54 EKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXX 233
EKAE EA++ ++ +E E + +E+ Q + EEK K E+E A +
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAK----REAEEKAKREAEEKAK 594
Query: 234 XXXXXXXXXXATATAKLSEASQAADES-ERARKVLENRSLADEERMDALENQLKEARFLA 410
A AK +A E+ E+A++ E ++ + E E + K R
Sbjct: 595 REAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 654
Query: 411 EEADKKYDEVARKLAMVEA 467
E+A ++ +E A++ A +A
Sbjct: 655 EKAKREAEENAKREAEEKA 673
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 35.9 bits (79), Expect = 0.005
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 7/155 (4%)
Frame = +3
Query: 3 DRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ-------VNGKLE 161
++ ++ + +D + + E E RQLQ ++ + ELD Q+ L + + ++E
Sbjct: 264 EKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIE 323
Query: 162 EKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLEN 341
EKE + E+E + +Q A L+ + E++ + +
Sbjct: 324 EKENSSSAFENEENSSYVHLQEDYAILQAKCDEFADRIQVLTADLEKEKENQIMHESEAS 383
Query: 342 RSLADEERMDALENQLKEARFLAEEADKKYDEVAR 446
L D ++ L+ QL +A EE + +D+++R
Sbjct: 384 IGLTDSMQVHTLQEQLHKAN---EEIEFLHDQISR 415
Score = 31.1 bits (67), Expect = 0.13
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Frame = +3
Query: 33 KDANLRAEKAEEEARQLQKKIQTIENE----------LDQTQESLMQVNGKLEEKEK--- 173
+D L+ EEE L+ K+QT+E++ L ESL N +++E++
Sbjct: 424 EDIMLQFRSLEEERDVLESKLQTLEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLR 483
Query: 174 --ALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRS 347
A +N++ +A N R+Q + L+E +E+E +++ +
Sbjct: 484 LLASKNSDKALAETNIRLQEVTKELETLRMKNSN---DLNEIHDLREENEGLTLKIDSIT 540
Query: 348 LADEERMDALENQLKEARFLAEEADKKYDEVARKL 452
+ ++ LE ++K E + DE KL
Sbjct: 541 KEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKL 575
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 34.7 bits (76), Expect = 0.010
Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 8/181 (4%)
Frame = +3
Query: 81 LQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXX 260
L+ K + +EN+L+ E L + N E + ++ AE ALN +
Sbjct: 748 LESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNK 807
Query: 261 XATATAKLSEASQAADESERARKVLENRSLADEERMDALE----NQLKEARFLAEEADKK 428
+ + +L E ++ + + L R A + + ++E NQ E + ++
Sbjct: 808 LSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKCSNL 867
Query: 429 YDEV--ARKLAMVEADLXXXXXXXXXXXXKIVE-LEEELRVVGNNLKSLE-VSXXKANQR 596
+++ KLA + K L +EL+ V + SL+ VS N+
Sbjct: 868 QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKE 927
Query: 597 E 599
+
Sbjct: 928 K 928
Score = 29.9 bits (64), Expect = 0.30
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 1/142 (0%)
Frame = +3
Query: 51 AEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXX 230
AEK EE Q+K+ + ELD T+ + Q+ EE + + ESE+
Sbjct: 654 AEKYHEELLDNQQKLYDLRIELDYTKSNCKQME---EEMQVLREGHESEIKDFIEEHSKL 710
Query: 231 XXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLA 410
++K + ++S K L N A E + LEN L L
Sbjct: 711 TKQLDDIKNQFGIISSKNRDLLSELEKS----KSLNNSLAALESKNKKLENDL---NLLT 763
Query: 411 EEADKK-YDEVARKLAMVEADL 473
E+ +KK D + K + EA+L
Sbjct: 764 EKLNKKNADTESFKNTIREAEL 785
Score = 28.7 bits (61), Expect = 0.69
Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 17/197 (8%)
Frame = +3
Query: 18 CEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLE------EKEKAL 179
C+Q ++ + E E E + ++ + +LD + ++ K EK K+L
Sbjct: 682 CKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSL 741
Query: 180 QNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERAR----------- 326
N+ + + + N++++ T + A+ S++A
Sbjct: 742 NNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENII 801
Query: 327 KVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXX 506
L+N+ + R+ L++QL + + E +++ A +L+ +E+
Sbjct: 802 SDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAK 861
Query: 507 XKIVELEEELRVVGNNL 557
K L+E++ GN L
Sbjct: 862 QKCSNLQEKIN-FGNKL 877
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 33.1 bits (72), Expect = 0.032
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 200
E+ + A+ E+ +EE R+L++KI++ + L+ Q S + ++E+K+ L E+
Sbjct: 594 EEPDEPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKKTRLMILREEL 653
Query: 201 AALN 212
L+
Sbjct: 654 QELD 657
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.3 bits (70), Expect = 0.056
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Frame = +3
Query: 60 AEEEARQLQKKIQTIENELDQTQESLMQ----VNGKLEEKEKALQNAESEVAALNRRIQX 227
AE E +Q+K E L+ E+ Q V ++ +E+ + + SE+ LN+R++
Sbjct: 962 AELEKSNIQQKYLASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEV 1021
Query: 228 XXXXXXXXXXXXATATAKLSEASQAADESERARKVLEN-RSLADEERMDALENQLKEARF 404
A +L +A + D + +K E RS AD + +L+ +++ R
Sbjct: 1022 LKEEKESSSKELA---KQLEDAVREKDSALSFKKDYEKIRSDADRV-ITSLKEDIEKERS 1077
Query: 405 LAEEADKKYD 434
L +E Y+
Sbjct: 1078 LMKECHSNYE 1087
Score = 32.3 bits (70), Expect = 0.056
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Frame = +3
Query: 54 EKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLE----EKE------------KALQN 185
E+ + E + +K++ +NEL+ Q + +GK E EKE + +QN
Sbjct: 1487 EQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQN 1546
Query: 186 AESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRS--LADE 359
+E+AAL R A ++L E+++ E E+ ++L RS +A++
Sbjct: 1547 LSAELAAL--REHSPTQGSLENADEIARLRSQL-ESTKQYYEKEKETEILAARSELVAEK 1603
Query: 360 ER-MDALENQLKE----ARFLAEEADKKYDE 437
E+ + LENQL E + L E+A K E
Sbjct: 1604 EKTKEELENQLNEKSQRIKELEEQAQKNSSE 1634
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 279 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 455
KL + + A S+ ++E S R++ L N+L+ + ++ +KK++E L
Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701
Query: 456 MVEADL 473
+ ++++
Sbjct: 702 LEKSNI 707
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ 143
EQQ +++ + ++ E L+ + + +ENEL Q +E L +
Sbjct: 63 EQQLRNSEKKLLQSNERYDLLEDERKLLENELSQIKEYLRE 103
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 33 KDANLRAEKAEEEARQLQKKIQTIENELDQTQES 134
K+ L ++ AE EA +QK+I+++++ Q QES
Sbjct: 1442 KNKELTSKNAENEA--MQKEIESLKDSNHQLQES 1473
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.5 bits (68), Expect = 0.097
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Frame = +3
Query: 57 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN----AESEVAALNRRIQ 224
K E + Q K+ ENE+++ + + L+++EK L+N E +LN R
Sbjct: 200 KREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERAT 259
Query: 225 XXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKE--- 395
+ A + E N++ +E +++LE ++ +
Sbjct: 260 KLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINSLEKKVSDIAL 319
Query: 396 ARFLAEEADKKYDEVARKLAMVE 464
+ L EEA ++Y KLAMVE
Sbjct: 320 EKQLLEEAVERY-----KLAMVE 337
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 30.7 bits (66), Expect = 0.17
Identities = 12/51 (23%), Positives = 35/51 (68%)
Frame = +3
Query: 57 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 209
K +EE LQ ++ + NEL ++++ + ++ K + +++++++ ESE++++
Sbjct: 141 KLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKESVKSHESELSSV 191
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 108 NELDQTQESLMQVNGK---LEEKEKALQNAESEVAALNRRIQ 224
N+L++ + + K L+EK K L+NA ++ L RRIQ
Sbjct: 60 NDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVRRIQ 101
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 30.7 bits (66), Expect = 0.17
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = -1
Query: 411 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGP 235
+RG + R R +P P SR+PY R RR PR +R RSR SR P
Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 30.3 bits (65), Expect = 0.22
Identities = 24/148 (16%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Frame = +3
Query: 27 QAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN------- 185
+ +A RAE AE + ++++ ++ E E + +LEE E+ +
Sbjct: 14 ETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADN 73
Query: 186 ---AESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD 356
++E L+R+++ T K+ + A+ ER + LE
Sbjct: 74 EDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDM 133
Query: 357 EERMDALENQLKEARFLAEEADKKYDEV 440
E++++ + ++ + + +E + +++
Sbjct: 134 EQKLEEMTDKYTKVKAELDEVHQALEDL 161
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.9 bits (64), Expect = 0.30
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Frame = +3
Query: 45 LRAEKAEEEARQLQKKIQTIENE---LDQTQESLMQVNG---KLEEKEKALQNAESEVAA 206
L ++ E +A QL +Q +NE LD +S +VN +L++ K + ++E+A
Sbjct: 201 LTSKIRELQASQLDHDLQASQNESAGLDVNAKSA-EVNAILSELDDANKIIVELQAEIAV 259
Query: 207 L--NRRIQXXXXXXXXXXXXXATATAKLSEASQA-ADESERARKVLENRSLADEERMDAL 377
L N + Q + ++ + E E ++ + L
Sbjct: 260 LKQNTKEQKSGSSQDDLSNQQKQQLDFMDSLNKKLSTELESIKEASRKEMETHCATIQTL 319
Query: 378 ENQLKEARFLAEE----ADK--KYDEVARKLAMVE 464
EN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 320 ENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.39
Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = +3
Query: 114 LDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLS-- 287
L +QE L+Q+N KLE+ + S L+++++ ++
Sbjct: 480 LSDSQEELLQLNAKLEKANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESY 539
Query: 288 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 467
E ++ + R K E E+ + L QLK AR + + D + + ++
Sbjct: 540 ENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARMKLADKYPQGDNTSENIDWLKH 599
Query: 468 DL 473
L
Sbjct: 600 SL 601
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.5 bits (63), Expect = 0.39
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 6 RAAMCEQQAKDANL--RAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 179
R+++ + N+ + + +E R+L+K + NE+ QESL + N L + +A+
Sbjct: 621 RSSILSHNSSAGNIDDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAI 680
Query: 180 Q 182
+
Sbjct: 681 R 681
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 0.69
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 39 ANLRAEKAEEEARQLQKKIQTIENELDQTQ--ESLMQVNGKLEEKEKALQNAESEV 200
A++ AEK+EE + + + + EN D+T+ +SL+ GK EE E ++ +++
Sbjct: 407 ASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKI 462
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 0.69
Identities = 20/75 (26%), Positives = 27/75 (36%)
Frame = -1
Query: 393 PSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYV 214
P DS P + +AP + P P RD P T R P G +
Sbjct: 479 PPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLM 538
Query: 213 GSGQPLRTQRSAEPS 169
+ QP++ EPS
Sbjct: 539 SADQPIKV---TEPS 550
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 28.3 bits (60), Expect = 0.91
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 18 CEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEK 173
C QAK + +A ++++ ++QTI E +Q Q ++++ + EK
Sbjct: 215 CYTQAKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEK 266
Score = 25.8 bits (54), Expect = 4.8
Identities = 21/92 (22%), Positives = 37/92 (40%)
Frame = +3
Query: 288 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 467
+A++ + E+ ++ L R+ E +D+ E K A+ +KK+ E R A
Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238
Query: 468 DLXXXXXXXXXXXXKIVELEEELRVVGNNLKS 563
L IV +EE + V K+
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 0.91
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 54 EKAEEEARQLQKKIQTIENE--LD---QTQESLMQVNGKLEEKEKALQNAESEVAALN 212
EKAE E Q++ + +T EN+ +D + V+ L+ KE+AL +E E++ L+
Sbjct: 5 EKAELENMQVESEAKTSENDQTIDTKVDVADVTTHVDEDLDNKEEALDFSEDELSDLD 62
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ----VNGKLEEKEKALQNA 188
E ++ ++K E L ++Q E LD ++SL ++ +EEK+KA+ A
Sbjct: 467 ENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQGKTEGISNAIEEKQKAMAPA 526
Query: 189 ESEVAALNRRIQ 224
++ L Q
Sbjct: 527 LEKINQLTSEKQ 538
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 294 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 434
S +++ +R++L S + E D L + L+ RF+ ++A K Y+
Sbjct: 84 SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 57 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 179
K E R KI + D+T E + + G EE EKAL
Sbjct: 342 KISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKAL 382
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 69 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNR 215
E +LQK++QT+E E ++ +E L E+ L+ E+EV +L +
Sbjct: 621 EFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQ---LKMTEAEVDSLRK 666
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.1 bits (57), Expect = 2.1
Identities = 30/189 (15%), Positives = 63/189 (33%)
Frame = +3
Query: 24 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVA 203
++ +D +R + R L ++QT+ + + S+ N LEE+ LQ +
Sbjct: 282 KKIEDERMRQMSVSSD-RTLDSQLQTVNENITRISTSIELKNTALEEEHGDLQQIRGKAK 340
Query: 204 ALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALEN 383
L ++ + S+ E L E
Sbjct: 341 ELETLLRGKRKRLDEVLSVYEKRKDEHQSISKDFKSQEELISSLTTGLSTTEGHETGYSR 400
Query: 384 QLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKS 563
+L EAR + + + KL + + + +L E+ ++ N+++
Sbjct: 401 KLHEARDTLNDFKAEKETNRLKLEGLNKQISLTKPKKAEATKRCDQLNREIDILQNHVEK 460
Query: 564 LEVSXXKAN 590
L++S N
Sbjct: 461 LKMSLKNTN 469
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 321 RARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQ 187
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 66 EEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE--VAALNRRIQ 224
EE + +KK++++ E+ + + ++ LEE +K + A++E V A N+ ++
Sbjct: 94 EEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADKEAKKAKTEAPVEAANKSLR 148
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 3.7
Identities = 29/109 (26%), Positives = 37/109 (33%)
Frame = -1
Query: 480 RAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 301
R + P P P P PP LP G P AP P + AP + A +
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 300 PGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQRSAEPSPSLRA 154
P P A AP + P PA + + A S+RA
Sbjct: 467 PPLPPAA------PAPPPAPAPAPAAPVASIAELPQQDGRANLMASIRA 509
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 66 EEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAA 206
E R+L+KK + +E + QE LMQ LEE+ ++N + A
Sbjct: 458 ESERELEKKKEQVEKK----QEELMQTRIVLEEQVFLVENMIEDAKA 500
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 200
E+ + ++ ++ + ++KI+ I +E D+ Q+ L +++ EEKEK +
Sbjct: 182 EENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELD---EEKEKVYAEEQEFY 238
Query: 201 AALNR 215
LN+
Sbjct: 239 NNLNQ 243
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 45 LRAEKAEEEARQLQKKIQTIENELDQTQESL 137
L +EK E +QL KIQ + + +DQT + +
Sbjct: 163 LGSEKLRFERKQLVSKIQKMLDHVDQTSQEV 193
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 3 DRAAMCEQQAKDANLRAEKAEEEARQLQKK-----IQTIENELDQTQESLMQVNGKLEE 164
++AAM + K+ + +E ARQL+ + I+ IE D+ Q+ M G+L E
Sbjct: 90 EQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDEIQD-YMDAAGELNE 147
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 471 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 379
S P P P QP ++S P LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 87 KKIQTIENELDQTQESLMQVNGKLEE 164
+KIQT+E + +T++ L G+L++
Sbjct: 785 EKIQTLERRISETEKELESYAGQLQD 810
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 27 QAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEK 167
+ K + A K + + KKI +NE +ESL +GK+ ++
Sbjct: 1108 KGKAGKMPASKKNKRQKGDVKKIDETKNEATDMEESLTTPSGKVNKE 1154
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 54 EKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 209
++ + +L+++ + N+L+ Q S Q L E ALQ V +L
Sbjct: 2018 KRIQSSVSRLEERNAQLRNQLEDVQASETQWKFALRRTEHALQEERERVKSL 2069
Score = 25.0 bits (52), Expect = 8.5
Identities = 20/99 (20%), Positives = 39/99 (39%)
Frame = +3
Query: 273 TAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKL 452
T L E A E + + +R ER+ +LENQ+ A E + + L
Sbjct: 873 TNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIADEKYEFLYAEKQSIEEDL 932
Query: 453 AMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 569
A + ++ K+ ++++ + + + K LE
Sbjct: 933 ANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELE 971
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 8.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 200
E D + + E E +LQ+K+ + + Q L V +LEE+ + Q EV
Sbjct: 65 ENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEV 124
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.0 bits (52), Expect = 8.5
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 200
E++ A+ EK + L+ ++ ++ DQ+Q L++ +LE KEK E
Sbjct: 426 EKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELETKEKKALEMHYEK 485
Query: 201 AALNRR 218
A ++
Sbjct: 486 ARATQK 491
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.0 bits (52), Expect = 8.5
Identities = 22/129 (17%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Frame = +3
Query: 108 NELDQTQESLMQVNGKLEEKEKALQNAE-------SEVAALNRRIQXXXXXXXXXXXXXA 266
NE++ + + N KLE++EK + ++ SE+ ++ +
Sbjct: 881 NEIELLHDQIRITNAKLEKREKLINASKYIEDTLRSEIQEAAEKVSNLEFSNFNLKEENS 940
Query: 267 TATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVAR 446
+L +A + + + L + +D L+ +L+ EE+ Y ++
Sbjct: 941 NMQLQLMKALEQRNTGAKQLVNLRMQLSTATSELDMLKLKLRTTALALEESPDDYSDI-- 998
Query: 447 KLAMVEADL 473
L+++ AD+
Sbjct: 999 -LSILRADM 1006
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 15 MCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEE-KEKALQ 182
M E+ KDA++ + + + + +EN L Q + ++Q G + KE+ LQ
Sbjct: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQ 57
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.0 bits (52), Expect = 8.5
Identities = 27/143 (18%), Positives = 62/143 (43%), Gaps = 7/143 (4%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAES 194
E ++ + + ++EEE + +KK + E+ E + K+EEK+++ ++ S
Sbjct: 109 ESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSS 168
Query: 195 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESE----RARKVLENRSLADEE 362
E ++ + K +S+++ +SE + + ++ S +D E
Sbjct: 169 ESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSE 228
Query: 363 RMDALENQLK-EARFLAEEADKK 428
+ E++ K +A +EE K
Sbjct: 229 SESSSEDEKKRKAEPASEERPAK 251
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = -1
Query: 390 SADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRG 238
S ++ RP PP + Y I + WP A R D T G
Sbjct: 345 SVQAKARPVHFEPPKAVAAEGYAEGTITHKWFWPTFASFLRESDVVTTETG 395
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,817,315
Number of Sequences: 5004
Number of extensions: 33590
Number of successful extensions: 249
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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