Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1796
(600 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 37 6e-04
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 36 0.001
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 33 0.007
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 33 0.009
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.050
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 30 0.066
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.61
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 1.1
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.4
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 2.5
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 2.5
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 5.7
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 7.5
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 36.7 bits (81), Expect = 6e-04
Identities = 28/156 (17%), Positives = 70/156 (44%)
Frame = +3
Query: 6 RAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN 185
R + AK +L+A+ A+ + + ++++++ E +L ++++ + ++ E+ +
Sbjct: 761 RETQTQCSAKVKDLQAKIADGKGHR-ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFET 819
Query: 186 AESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEER 365
+ E+ L + I A +L E S DE A L+ + +E+
Sbjct: 820 LKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEK 879
Query: 366 MDALENQLKEARFLAEEADKKYDEVARKLAMVEADL 473
M++ +LK ++ K+ DE+ ++ E ++
Sbjct: 880 MNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915
Score = 23.8 bits (49), Expect = 4.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQV 146
E+Q K+ R + E++ +KKIQ I +LD+ ++ ++V
Sbjct: 993 EEQYKEVMRRKKVVEDD----KKKIQAIITDLDEEKKKKLKV 1030
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 35.5 bits (78), Expect = 0.001
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAES 194
E + ++ LR E +LQK I+ + +LDQ + ++ Q + K+ A+ E+
Sbjct: 776 EGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEA 835
Query: 195 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDA 374
E+A + I L ++++ +E +R R L + ++ R +A
Sbjct: 836 EIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESMEERKRTRVALS--AALEQARQEA 893
Query: 375 LE 380
E
Sbjct: 894 SE 895
Score = 25.8 bits (54), Expect = 1.1
Identities = 14/74 (18%), Positives = 31/74 (41%)
Frame = +3
Query: 3 DRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQ 182
D + EQ+ + + +E +L I + + E+D ++ V EEK
Sbjct: 432 DGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERC 491
Query: 183 NAESEVAALNRRIQ 224
+SE + ++++
Sbjct: 492 AKQSETTRIEKQLE 505
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.1 bits (72), Expect = 0.007
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLM----QVNGKLEEKEKALQNA 188
E K+A +K EEA +L + I+ N T L Q+NG+L + + L+
Sbjct: 1434 EDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEER 1493
Query: 189 ESEVA----ALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD 356
E+++ N + + + E S E R++ N SL D
Sbjct: 1494 EAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDD 1552
Query: 357 -EERMDALENQLKEAR 401
E R+ A E +L++A+
Sbjct: 1553 LERRLSAAEKELEDAQ 1568
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 32.7 bits (71), Expect = 0.009
Identities = 33/149 (22%), Positives = 59/149 (39%)
Frame = +3
Query: 21 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 200
E K+ R + E+ R LQ+++ ++ QT+ + + K +E L N + E
Sbjct: 639 ENSIKELQERCAELREQKRDLQEQL----SKYQQTKMKVKRQEQKCKELTARLVNVDEEK 694
Query: 201 AALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALE 380
R + A + + AS+ D E+ ++ E R+ E LE
Sbjct: 695 VKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEERNNDREANFRLLE 754
Query: 381 NQLKEARFLAEEADKKYDEVARKLAMVEA 467
+ + A+ K V +KLA V+A
Sbjct: 755 DAYQSAK-------KTLANVEKKLAEVKA 776
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.050
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Frame = +3
Query: 24 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNA----- 188
Q++KD + E+E Q I+ +E Q +E ++ +LEE + A++ A
Sbjct: 931 QKSKD---KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSS 987
Query: 189 --ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEE 362
+ E+ AL +R T KL E + K L+ + +E
Sbjct: 988 SIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDTLPHWQLQLKPLKLHEIPEEP 1047
Query: 363 RMDALENQLKE 395
+ L+ +E
Sbjct: 1048 PQEPLKEYTEE 1058
Score = 29.9 bits (64), Expect = 0.066
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 69 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 212
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 24.2 bits (50), Expect = 3.3
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +3
Query: 282 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 461
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 462 EADL 473
E+ L
Sbjct: 375 ESTL 378
Score = 24.2 bits (50), Expect = 3.3
Identities = 20/101 (19%), Positives = 39/101 (38%)
Frame = +3
Query: 105 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 284
E+EL Q + KLE + + E ++ R+Q TA KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 285 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 407
E + E + + ++ + +E M A+++ + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 29.9 bits (64), Expect = 0.066
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 585 PXPXRLPEISGCYQRHGAPPQAQRFWIRRTRHA 487
P P + E + C+QR+ A P+A R IRR A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.61
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +3
Query: 309 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 440
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 25.8 bits (54), Expect = 1.1
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +3
Query: 9 AAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 179
AA E+Q A ++ +E + LQK++ + + + L+ N + E ++AL
Sbjct: 116 AATLEEQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDLLLANIAIGETKQAL 172
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.4
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +2
Query: 62 RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSGCPEPTYPTAGGGP 241
R+R + EED D +R S +G R R G GS R+G AG G
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS-----RAG------SRAGSGS 1095
Query: 242 REVRGASRDRHR 277
R R SR R R
Sbjct: 1096 RS-RSRSRSRSR 1106
Score = 24.2 bits (50), Expect = 3.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 24 QQAKDANLRAEKAEEEARQLQKKIQTIENE 113
QQA+ RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849
Score = 22.6 bits (46), Expect = 10.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 164 EGEGSAER*VRSGCPEPTYPTAGGGPREVRGASR 265
EG G+ + R G +P GGG R+ + +R
Sbjct: 929 EGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKAR 962
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 2.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 354 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 247
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 2.5
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -1
Query: 417 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 328
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 5.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 285 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 431
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.0 bits (47), Expect = 7.5
Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Frame = -1
Query: 528 PQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCA--PH 355
P A ++R + A PQP A P + PP R + P+ P A
Sbjct: 65 PSAVSSQLQRPQPTVLAASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPRAEVKF 124
Query: 354 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVG--SGQPLRTQRS 181
P+ + P VR + ++ P + S PPP + P R
Sbjct: 125 VPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPNPG 184
Query: 180 AEPSPSL 160
P P +
Sbjct: 185 MPPGPQM 191
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,282
Number of Sequences: 2352
Number of extensions: 9642
Number of successful extensions: 46
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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