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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1795
         (750 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p...   367   e-103
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ...   357   1e-99
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc...   321   8e-89
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...   316   3e-87
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...   249   3e-67
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch...   138   1e-33
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom...   109   5e-25
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe...    79   9e-16
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces...    30   0.31 
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar...    29   0.94 
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    27   2.2  
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch...    26   6.6  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    25   8.7  
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar...    25   8.7  
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al...    25   8.7  

>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 647

 Score =  367 bits (904), Expect = e-103
 Identities = 173/212 (81%), Positives = 192/212 (90%)
 Frame = +1

Query: 52  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 231
           ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4   SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63

Query: 232 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 411
           TIFDAKRLIGRKF+D  VQ+DMKHWPF+V+S  GKP ++V YKGE KTF PEE+SSMVL 
Sbjct: 64  TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123

Query: 412 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 591
           KM+ETAEAYLG  V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183

Query: 592 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIF 687
           D+   GE NVLIFDLGGGTFDVS+LTIE+GIF
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIF 215



 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +2

Query: 686 FEVKSTAGDTHLGGXDFDN 742
           FEVK+TAGDTHLGG DFD+
Sbjct: 215 FEVKATAGDTHLGGEDFDS 233


>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 644

 Score =  357 bits (877), Expect = 1e-99
 Identities = 168/212 (79%), Positives = 189/212 (89%)
 Frame = +1

Query: 52  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 231
           ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4   SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63

Query: 232 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 411
           TIFDAKRLIGR+F D  VQ+DMKHWPF+V+   GKP I+V +KGE KTF PEE+SSMVL 
Sbjct: 64  TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123

Query: 412 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 591
           KM+E+AEA+LG  V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183

Query: 592 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIF 687
           D+    E NVLIFDLGGGTFDVS+LTIE+GIF
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIF 215



 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +2

Query: 686 FEVKSTAGDTHLGGXDFDN 742
           FEVK+TAGDTHLGG DFD+
Sbjct: 215 FEVKATAGDTHLGGEDFDS 233


>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score =  321 bits (788), Expect = 8e-89
 Identities = 151/212 (71%), Positives = 176/212 (83%)
 Frame = +1

Query: 52  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 231
           A+GIDLGTTYSCV V++   VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8   AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67

Query: 232 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 411
           T+FDAKRLIGR++ED   Q D+KHWPF+V+ + G P I+V Y GE K F  +E+S+MVLT
Sbjct: 68  TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127

Query: 412 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 591
           KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187

Query: 592 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIF 687
           D K    +NVLIFDLGGGTFDVS+L I+ G+F
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVF 219



 Score = 39.5 bits (88), Expect = 5e-04
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +2

Query: 686 FEVKSTAGDTHLGGXDFDNS 745
           FEV +TAGDTHLGG DFDN+
Sbjct: 219 FEVLATAGDTHLGGEDFDNA 238


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score =  316 bits (775), Expect = 3e-87
 Identities = 143/211 (67%), Positives = 183/211 (86%)
 Frame = +1

Query: 55  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 234
           +GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ   NP NT
Sbjct: 38  IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97

Query: 235 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 414
           IFD KRLIGRKF++ T+  D+K +PF +V+D  +P ++V   G+ K F PEE+S+M+L+K
Sbjct: 98  IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157

Query: 415 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 594
           MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217

Query: 595 KKGTGERNVLIFDLGGGTFDVSILTIEDGIF 687
           K  T E++++++DLGGGTFDVS+L+I++G+F
Sbjct: 218 KTDT-EKHIVVYDLGGGTFDVSLLSIDNGVF 247



 Score = 37.9 bits (84), Expect = 0.002
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 686 FEVKSTAGDTHLGGXDFDN 742
           FEV +T+GDTHLGG DFDN
Sbjct: 247 FEVLATSGDTHLGGEDFDN 265


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score =  249 bits (610), Expect = 3e-67
 Identities = 120/216 (55%), Positives = 156/216 (72%), Gaps = 1/216 (0%)
 Frame = +1

Query: 43  KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 219
           K P +GIDLGTT SC+ + +    ++IAN +G RTTPS VAFT D ERL+G +AK Q  +
Sbjct: 49  KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108

Query: 220 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 399
           NP NT F  KRLIGR+F++  VQ D+K  P+++V            +   KT+ P ++  
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGG 165

Query: 400 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 579
            +L+KM+ETA  YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAAL 225

Query: 580 AYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIF 687
           AYGLDKK   +  V +FDLGGGTFD+SIL + +G+F
Sbjct: 226 AYGLDKK--NDAIVAVFDLGGGTFDISILELNNGVF 259



 Score = 37.1 bits (82), Expect = 0.003
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 686 FEVKSTAGDTHLGGXDFD 739
           FEV+ST GDTHLGG DFD
Sbjct: 259 FEVRSTNGDTHLGGEDFD 276


>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
           Pss1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 720

 Score =  138 bits (333), Expect = 1e-33
 Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 5/221 (2%)
 Frame = +1

Query: 40  AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 219
           ++   VGID G + + + V ++  +++I N+  NR+TPS V++ +  R +G+AAK+  A 
Sbjct: 3   SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62

Query: 220 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 396
           N  NT+   KRL GR ++D  ++  +      ++    G    KV Y  E+  F   ++ 
Sbjct: 63  NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122

Query: 397 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 576
           +   TK+K  AEA L  +V + VI++PA+F D QR+A  +A  I+GLN LR++N+  AAA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAA 182

Query: 577 IAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIF 687
           + YG+ K    E    R V I D G   + VSI+    G F
Sbjct: 183 LTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQF 223


>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 566

 Score =  109 bits (261), Expect = 5e-25
 Identities = 58/216 (26%), Positives = 118/216 (54%), Gaps = 6/216 (2%)
 Frame = +1

Query: 55  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 234
           +GI  G   S +   + GK +++AN++GNR  PS +++   +   G  A+ Q+  N +N+
Sbjct: 27  IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86

Query: 235 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFFPEEVS 396
           + + + L+G+  ++ T+     H+    V+  G+   K+  + ++      K     E S
Sbjct: 87  VTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144

Query: 397 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 576
              L ++ E+AE +LG  V   V++VP YF D+QR+A + A   +GL VL++I++P A  
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVI 204

Query: 577 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 684
           +A    ++   ++ V++ + G    +VS+++++ G+
Sbjct: 205 LALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGL 240


>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 848

 Score = 78.6 bits (185), Expect = 9e-16
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
 Frame = +1

Query: 55  VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 231
           + ID GT ++   + + G  +EI+      R   S VAF   ER+ G  A N     P +
Sbjct: 25  LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84

Query: 232 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 405
           +I + K L+     E   VQ     +P   + +  +    +++   +++ +  EE+ +M 
Sbjct: 85  SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144

Query: 406 LTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 585
           +      AE    + + + V+TVP +FN+ QR    +A  I   +VL +I++  A AI Y
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEY 204

Query: 586 GLDKK-GTGERNVLIFDLGGGTFDVSILTIE 675
            L +   T     +I+D G G+   ++++ +
Sbjct: 205 SLSRSFSTDPTYNIIYDSGSGSTSATVISFD 235


>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 451

 Score = 30.3 bits (65), Expect = 0.31
 Identities = 19/76 (25%), Positives = 34/76 (44%)
 Frame = +1

Query: 160 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 339
           + F+D E   GD A     + P   +  AK L+G+  +   +  D    P++V+ D   P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184

Query: 340 KIKVAYKGEDKTFFPE 387
            +K+   G  + F  +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199


>SPAC25B8.04c |||mitochondrial splicing suppressor
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 378

 Score = 28.7 bits (61), Expect = 0.94
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 47  HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 142
           HP   S W+P    LVS+    W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
 Frame = -2

Query: 695 SPRKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGS-LMIRRTFKPEMVP 519
           S   IP+S     +S +    S IS+   P  F S    ++++  S      +       
Sbjct: 541 SSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTS 600

Query: 518 ASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLIL 339
           ++F +    S     + I++  T+L     + S + +S+  + S    +LSS +     +
Sbjct: 601 STFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---I 657

Query: 338 GLPPSLTTSKGQCFMSACTVASSN 267
            +  SL+T       S+ T+ SS+
Sbjct: 658 PISSSLSTYSSSVIPSSSTLVSSS 681


>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 719 SGCR-RRWISPRKIPSSMVRMDTSKVPPPRSKIST 618
           SGC    W+     PS  ++    K PP R +I+T
Sbjct: 410 SGCEVPNWVMALPKPSKEMKKKLKKSPPKRKRITT 444


>SPAC2F7.03c |pom1||DYRK family protein kinase
           Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +3

Query: 33  QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 212
           +NGK T +R +S     + W  P++E    R   G  D +    V R   +  +  +EP 
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531

Query: 213 GDEPQQ 230
            ++P++
Sbjct: 532 -EKPEE 536


>SPAC823.11 |||sphingosine-1-phosphate phosphatase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 411

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 133 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 29
           G W  SP S +  H   ++++  +F +RVL   C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310


>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
           subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 173

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 391 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 513
           ++  ++ K    A   LGK     +      FN+SQ+QAT+
Sbjct: 57  INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,175,608
Number of Sequences: 5004
Number of extensions: 67948
Number of successful extensions: 246
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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