Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1788
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 174 4e-44
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 174 4e-44
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 173 1e-43
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 172 2e-43
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 172 2e-43
03_01_0034 + 318432-318825,318902-319851 170 9e-43
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 151 4e-37
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 151 4e-37
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 85 6e-17
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 84 8e-17
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 83 1e-16
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 67 1e-11
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 64 7e-11
02_05_1214 + 34976814-34979813 31 1.1
09_04_0325 + 16689613-16689772,16690043-16690329 30 1.4
04_04_0096 - 22777684-22777797,22778668-22779047,22779162-227793... 30 1.4
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 30 1.8
01_05_0750 - 24895954-24896175,24896774-24897304,24897420-24897869 29 4.2
03_05_0715 + 27083102-27083308,27083384-27083504,27084014-270840... 28 5.6
03_01_0524 + 3943581-3943610,3943889-3944050,3944403-3944637,394... 28 7.4
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 27 9.8
02_05_0686 - 30900748-30902167,30903442-30904742 27 9.8
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906... 27 9.8
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 27 9.8
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 174 bits (424), Expect = 4e-44
Identities = 85/122 (69%), Positives = 91/122 (74%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQGF
Sbjct: 74 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M T+SV P + T+ VEPYNATLS HQL
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VE 541
VE
Sbjct: 193 VE 194
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAILRRL 158
ERINVYYNEASGG+YVPRA+L L
Sbjct: 45 ERINVYYNEASGGRYVPRAVLMDL 68
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHG+D TG Y G L + ++Y + P +DLEP TM
Sbjct: 26 DEHGVDATGRYAGDSDLQLERINVYYN-EASGGRYVPRAVLMDLEPGTM 73
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 174 bits (424), Expect = 4e-44
Identities = 85/122 (69%), Positives = 91/122 (74%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQGF
Sbjct: 74 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M T+SV P + T+ VEPYNATLS HQL
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VE 541
VE
Sbjct: 193 VE 194
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAILRRL 158
ERINVYYNEASGG++VPRA+L L
Sbjct: 45 ERINVYYNEASGGRFVPRAVLMDL 68
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGID TG Y G L + ++Y + P +DLEP TM
Sbjct: 26 DEHGIDHTGKYSGDSDLQLERINVYYN-EASGGRFVPRAVLMDLEPGTM 73
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 173 bits (421), Expect = 1e-43
Identities = 84/122 (68%), Positives = 91/122 (74%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQGF
Sbjct: 74 DSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M T+SV P + T+ VEPYNATLS HQL
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VE 541
VE
Sbjct: 193 VE 194
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAILRRL 158
ERINVYYNEASGG+YVPRA+L L
Sbjct: 45 ERINVYYNEASGGRYVPRAVLMDL 68
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGID TG Y G L + ++Y + P +DLEP TM
Sbjct: 26 DEHGIDHTGKYSGDSDLQLERINVYYN-EASGGRYVPRAVLMDLEPGTM 73
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 172 bits (419), Expect = 2e-43
Identities = 94/161 (58%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Frame = +2
Query: 62 MGXSDLQLGAHQCIL-Q*SLRRQVRAPRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQ 238
+G SDLQL + S R V PR DSVR+GP+GQIFRPDNFVFGQ
Sbjct: 37 VGTSDLQLERVNVYYNEASCGRFV--PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ 94
Query: 239 SGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXK 418
SGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQGFQ K
Sbjct: 95 SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISK 154
Query: 419 IREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQLVE 541
IRE YPDR M T+SV P + T+ VEPYNATLS HQLVE
Sbjct: 155 IREEYPDRMMLTFSVFPSPKVSDTV-VEPYNATLSVHQLVE 194
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1
Query: 10 FGTXALDEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
F DEHGIDPTG Y G L + ++Y + P +DLEP TM
Sbjct: 20 FWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYN-EASCGRFVPRAVLMDLEPGTM 73
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 172 bits (418), Expect = 2e-43
Identities = 83/122 (68%), Positives = 91/122 (74%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQGF
Sbjct: 254 DSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 313
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M T+SV P + T+ VEPYNATLS HQL
Sbjct: 314 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV-VEPYNATLSVHQL 372
Query: 536 VE 541
VE
Sbjct: 373 VE 374
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 66 GTLTCSWERINVYYNEASGGKYVPRAILRRL 158
GT ER+NVYYNEAS G++VPRA+L L
Sbjct: 218 GTSDLQLERVNVYYNEASCGRFVPRAVLMDL 248
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1
Query: 10 FGTXALDEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
F DEHGIDPTG Y G L + ++Y + P +DLEP TM
Sbjct: 200 FWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYN-EASCGRFVPRAVLMDLEPGTM 253
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 170 bits (413), Expect = 9e-43
Identities = 82/122 (67%), Positives = 90/122 (73%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVRSGP+G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV RKE+E+CDCLQGF
Sbjct: 74 DSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M T+SV P + T+ VEPYNATLS HQL
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VE 541
VE
Sbjct: 193 VE 194
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAILRRL 158
ER+NVYYNEAS G++VPRA+L L
Sbjct: 45 ERVNVYYNEASCGRFVPRAVLMDL 68
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 31 EHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
EHGID TG Y G L + ++Y + P +DLEP TM
Sbjct: 27 EHGIDATGRYDGDSDLQLERVNVYYN-EASCGRFVPRAVLMDLEPGTM 73
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 151 bits (367), Expect = 4e-37
Identities = 82/138 (59%), Positives = 89/138 (64%), Gaps = 16/138 (11%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQ-- 349
DS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQ
Sbjct: 74 DSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQDN 133
Query: 350 --------------GFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXT 487
GFQ KIRE YPDR M T+SV P +
Sbjct: 134 RVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 193
Query: 488 TLXVEPYNATLSXHQLVE 541
T+ VEPYNATLS HQLVE
Sbjct: 194 TV-VEPYNATLSVHQLVE 210
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 66 GTLTCSWERINVYYNEASGGKYVPRAILRRL 158
GT ERINVY+NEASGG++VPRA+L L
Sbjct: 38 GTSPQQLERINVYFNEASGGRHVPRAVLMDL 68
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 31 EHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
EHG+DPTG Y G + ++Y + P +DLEP TM
Sbjct: 27 EHGVDPTGTYTGTSPQQLERINVYFN-EASGGRHVPRAVLMDLEPGTM 73
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 151 bits (367), Expect = 4e-37
Identities = 83/143 (58%), Positives = 91/143 (63%), Gaps = 21/143 (14%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQ-- 349
DSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV RKE+E+CDCLQ
Sbjct: 74 DSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGC 133
Query: 350 -------------------GFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPL 472
GFQ KIRE YPDR M T+SV P
Sbjct: 134 RRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 193
Query: 473 AQSXTTLXVEPYNATLSXHQLVE 541
+ T+ VEPYNATLS HQLVE
Sbjct: 194 PKVSDTV-VEPYNATLSVHQLVE 215
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAILRRL 158
ER+NVYYNEAS G++VPRA+L L
Sbjct: 45 ERVNVYYNEASCGRFVPRAVLMDL 68
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1
Query: 10 FGTXALDEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
F DEHGIDPTG Y G L + ++Y + P +DLEP TM
Sbjct: 20 FWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYN-EASCGRFVPRAVLMDLEPGTM 73
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 84.6 bits (200), Expect = 6e-17
Identities = 44/122 (36%), Positives = 65/122 (53%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD RK +++C LQGF
Sbjct: 76 DEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + ++V P Q T++ VEPYN+ LS H L
Sbjct: 136 LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV-VEPYNSVLSTHSL 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 84.2 bits (199), Expect = 8e-17
Identities = 43/122 (35%), Positives = 64/122 (52%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD RK +++C LQGF
Sbjct: 76 DEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +++ P Q +T VEPYN+ LS H L
Sbjct: 136 LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQ-VSTAVVEPYNSVLSTHSL 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 69 TLTCSWERINVYYNEASGGKYVPRAI 146
T+ + + N +++E GK+VPRAI
Sbjct: 41 TVGVAHDAFNTFFSETGAGKHVPRAI 66
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 83.4 bits (197), Expect = 1e-16
Identities = 44/122 (36%), Positives = 65/122 (53%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD RK +++C LQGF
Sbjct: 76 DEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + ++V P Q T++ VEPYN+ LS H L
Sbjct: 136 LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV-VEPYNSVLSTHSL 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 67.3 bits (157), Expect = 1e-11
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D V++GP+ Q+F P+ + + A NN+A+GHYT G E+VD LD RK +++C LQGF
Sbjct: 136 DEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGF 195
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQ------------------- 478
++ Y + +++ P Q
Sbjct: 196 LVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQ 255
Query: 479 -SXTTLXVEPYNATLSXHQLVE 541
+T VEPYN+ LS H L+E
Sbjct: 256 CKISTAVVEPYNSVLSTHSLIE 277
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
Frame = +3
Query: 60 PWG--TLTCS-------WERINVYYNEASGGKYVPRAI 146
PW TL CS + N +++E S GK+VPRA+
Sbjct: 89 PWSYLTLACSDTTPGIARDAFNTFFSETSSGKHVPRAL 126
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQ 349
+ +++ + ++ +N + GAGNNWA G Y +G ++VD ++D+ +E++ D L+
Sbjct: 75 NGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMIDREADGSDSLE 133
Query: 350 GFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXH 529
GF + + Y + + TYSV P + + V+PYN+ L+
Sbjct: 134 GFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLK 193
Query: 530 QL 535
+L
Sbjct: 194 RL 195
>02_05_1214 + 34976814-34979813
Length = 999
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 334 LRLPTGLPTYTFPR-WRHRVRYGHPPHLK 417
L LPT F WR+RVR HPPH++
Sbjct: 843 LILPTAFLAMAFTGLWRYRVRSRHPPHME 871
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +2
Query: 209 FRPDNFVFGQSGAGN-NWA 262
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>04_04_0096 -
22777684-22777797,22778668-22779047,22779162-22779373,
22780119-22780561
Length = 382
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 256 VVAGAGLSEDEVVRTEDLSERSGADRVPWXR--APSRRRMARGTYLPPEA 113
++ G G + D+V+ T + +G D + + + PS+R M Y+ PEA
Sbjct: 285 IMLGCGETPDQVISTTEKVRAAGVDVMTFGQYMRPSKRHMPVSEYVTPEA 334
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 304 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 188
D++ +L+TL CVV+LGP +AG DE+ + SE SG
Sbjct: 472 DKIIDLATLTGACVVALGPSIAGIFTPSDELAKEVAAASEISG 514
>01_05_0750 - 24895954-24896175,24896774-24897304,24897420-24897869
Length = 400
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 221 CPDGRSVRKVRSGQSPMVXGSKST*NGAGHVLAAGGFIVVYIDALPTASQSXP 63
CPDG + KV + + ++ G KS + HV+ G V DA A S P
Sbjct: 145 CPDGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSP 197
>03_05_0715 +
27083102-27083308,27083384-27083504,27084014-27084087,
27085713-27085838
Length = 175
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 146 NGAGHVLAAGGFIVVYIDALPTASQSXPW 60
+GAGH+L G V I P ++ PW
Sbjct: 79 DGAGHILVDDGSCVAEITLTPKEAEGQPW 107
>03_01_0524 +
3943581-3943610,3943889-3944050,3944403-3944637,
3945626-3945666,3946101-3946145,3947119-3947246,
3947446-3947554,3947641-3947694
Length = 267
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 185 RSGPFGQIFRPDNFVFGQSGAGNNWAKGH 271
++ P+ + +++ +G SGAGN ++ GH
Sbjct: 64 QANPYWAMMHTNSYKYGYSGAGNYYSYGH 92
>03_06_0399 - 33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 452 TYSVAPLAQSXTTLXVEPYNATLSXHQLVEKXRTKTXCIDNRXYXP 589
++SV P + +T V PY+A + HQL + +DN P
Sbjct: 969 SFSVEPWLRDFSTSCVAPYSAGATEHQLSLDEAVQDKQMDNSTVGP 1014
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 309 MXSAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVXSTPTXS 446
+ +A+ QN I R + P+ A P P+ +PS S + +TP+ S
Sbjct: 25 LAAAQGQN--IQTRFPSTRTPAFATPPPITSPSPSPGTPTATPSSS 68
>02_03_0313 -
17590109-17590148,17590254-17590382,17590479-17590612,
17590779-17590841,17590920-17591070,17593372-17593424,
17593483-17593629,17593839-17594163,17594240-17594409,
17595252-17595453,17596065-17596273,17597051-17597260,
17597360-17597489,17599664-17600402,17600411-17600531
Length = 940
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 407 GGCPYRTRCRHRGNV*VG-SPVGNRKILIL-CGXHRGPSQRAQHPLCSVP 264
GGC Y RC G++ G + VG+R+ G +QR QH C P
Sbjct: 163 GGCDYAERCSTTGSITCGANGVGSRRATRAGKGGAAAAAQREQH-ACQPP 211
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -3
Query: 246 APDCPKTKLSGRKICPKGPERTESHGXGLQVDVEWRGA-RTCRRRLHCSIH*CAPNC 79
A C L GR+ CP G + S L D E TC + L C H C C
Sbjct: 326 AGKCGGCPLQGRRTCPCGKKDYPS----LDCDAEAATCGSTCEKVLGCGRHKCPERC 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,228,183
Number of Sequences: 37544
Number of extensions: 373042
Number of successful extensions: 1143
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -