Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1788
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 181 5e-46
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 180 8e-46
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 180 8e-46
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 180 8e-46
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 180 8e-46
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 179 2e-45
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 114 4e-26
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 114 4e-26
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 83 1e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 83 1e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 83 1e-16
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 83 1e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 81 5e-16
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 81 5e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 81 7e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 4e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 4e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 4e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 4e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 77 1e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 73 2e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 70 1e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 70 1e-12
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 181 bits (440), Expect = 5e-46
Identities = 89/133 (66%), Positives = 97/133 (72%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV RKE+ESCDCLQGF
Sbjct: 74 DSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M T+SV P + T+ VEPYNATLS HQL
Sbjct: 134 QMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VEKXRTKTXCIDN 574
VE +T CIDN
Sbjct: 193 VEN-TDETFCIDN 204
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAIL 149
ERINVYYNEASGGKYVPRA L
Sbjct: 45 ERINVYYNEASGGKYVPRACL 65
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGIDPTGAY+G L + ++Y + P VDLEP TM
Sbjct: 26 DEHGIDPTGAYNGDSDLQLERINVYYN-EASGGKYVPRACLVDLEPGTM 73
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 180 bits (438), Expect = 8e-46
Identities = 88/133 (66%), Positives = 97/133 (72%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV RKE+E CDCLQGF
Sbjct: 74 DSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M+++SV P + T+ VEPYNATLS HQL
Sbjct: 134 QLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VEKXRTKTXCIDN 574
VE +T CIDN
Sbjct: 193 VEN-TDETFCIDN 204
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAIL 149
ERINVYYNEA+GGKYVPRA+L
Sbjct: 45 ERINVYYNEANGGKYVPRAVL 65
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGI P G Y G L + ++Y + P VDLEP TM
Sbjct: 26 DEHGIQPDGTYKGESDLQLERINVYYN-EANGGKYVPRAVLVDLEPGTM 73
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 180 bits (438), Expect = 8e-46
Identities = 88/133 (66%), Positives = 97/133 (72%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
DSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV RKE+E CDCLQGF
Sbjct: 74 DSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGF 133
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
Q KIRE YPDR M+++SV P + T+ VEPYNATLS HQL
Sbjct: 134 QLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV-VEPYNATLSVHQL 192
Query: 536 VEKXRTKTXCIDN 574
VE +T CIDN
Sbjct: 193 VEN-TDETYCIDN 204
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAIL 149
ERI+VYYNEA+ GKYVPRA+L
Sbjct: 45 ERIDVYYNEANNGKYVPRAVL 65
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGI P G + G L + +Y + P VDLEP TM
Sbjct: 26 DEHGIQPDGTFKGETDLQLERIDVYYN-EANNGKYVPRAVLVDLEPGTM 73
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 180 bits (438), Expect = 8e-46
Identities = 97/171 (56%), Positives = 107/171 (62%)
Frame = +2
Query: 62 MGXSDLQLGAHQCILQ*SLRRQVRAPRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQS 241
+G SDLQL + + PR DSVRSGPFGQ+FRPDN+VFGQS
Sbjct: 37 VGDSDLQLERINVYYNEAGSNKY-VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQS 95
Query: 242 GAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKI 421
GAGNNWAKGHYTEGAELVD+VLDV RKE+ES DCLQGFQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Query: 422 REXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQLVEKXRTKTXCIDN 574
RE YPDR MNT+SV P + T+ VEPYNATLS HQLVE T CIDN
Sbjct: 156 REEYPDRIMNTFSVVPSPKVSDTV-VEPYNATLSVHQLVEN-TDSTFCIDN 204
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGIDP+G Y G L + ++Y + + P VDLEP TM
Sbjct: 26 DEHGIDPSGQYVGDSDLQLERINVYYN-EAGSNKYVPRAVLVDLEPGTM 73
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 180 bits (438), Expect = 8e-46
Identities = 97/171 (56%), Positives = 107/171 (62%)
Frame = +2
Query: 62 MGXSDLQLGAHQCILQ*SLRRQVRAPRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQS 241
+G SDLQL + + PR DSVRSGPFGQ+FRPDN+VFGQS
Sbjct: 37 VGDSDLQLERINVYYNEAGSNKY-VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQS 95
Query: 242 GAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKI 421
GAGNNWAKGHYTEGAELVD+VLDV RKE+ES DCLQGFQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Query: 422 REXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQLVEKXRTKTXCIDN 574
RE YPDR MNT+SV P + T+ VEPYNATLS HQLVE T CIDN
Sbjct: 156 REEYPDRIMNTFSVVPSPKVSDTV-VEPYNATLSVHQLVEN-TDSTFCIDN 204
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGIDP+G Y G L + ++Y + + P VDLEP TM
Sbjct: 26 DEHGIDPSGQYVGDSDLQLERINVYYN-EAGSNKYVPRAVLVDLEPGTM 73
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 179 bits (435), Expect = 2e-45
Identities = 95/170 (55%), Positives = 105/170 (61%)
Frame = +2
Query: 65 GXSDLQLGAHQCILQ*SLRRQVRAPRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSG 244
G SDLQL PR DSVRSGPFGQ+FRPDNFVFGQSG
Sbjct: 38 GESDLQLERIDVYYN-EANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSG 96
Query: 245 AGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIR 424
AGNNWAKGHYTEGAELVD+VLDV RKE+E CDCLQGFQ KIR
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
Query: 425 EXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQLVEKXRTKTXCIDN 574
E +PDR M+++SV P + T+ VEPYNATLS HQLVE +T CIDN
Sbjct: 157 EEFPDRIMSSFSVVPSPKVSDTV-VEPYNATLSVHQLVEN-TDETYCIDN 204
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 28 DEHGIDPTGAYHGXL*LAVGSASMYTTMKPPAASTCPAPFYVDLEPXTM 174
DEHGI P G + G L + +Y + P VDLEP TM
Sbjct: 26 DEHGIQPDGTFKGESDLQLERIDVYYN-EANNGKYVPRAVLVDLEPGTM 73
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 114 bits (275), Expect = 4e-26
Identities = 57/131 (43%), Positives = 81/131 (61%)
Frame = +2
Query: 182 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGFQX 361
VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V R+E+E+ D L+GFQ
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQL 135
Query: 362 XXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQLVE 541
K+RE Y D+ ++T S+ P A+ T+ VEPYNA LS L++
Sbjct: 136 IHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTV-VEPYNAILSMPHLMD 194
Query: 542 KXRTKTXCIDN 574
+ CIDN
Sbjct: 195 NC-DENFCIDN 204
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAIL 149
ERI YY E G KYVPRAIL
Sbjct: 45 ERITSYYKEMEGRKYVPRAIL 65
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 114 bits (275), Expect = 4e-26
Identities = 57/131 (43%), Positives = 81/131 (61%)
Frame = +2
Query: 182 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGFQX 361
VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V R+E+E+ D L+GFQ
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQL 135
Query: 362 XXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQLVE 541
K+RE Y D+ ++T S+ P A+ T+ VEPYNA LS L++
Sbjct: 136 IHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTV-VEPYNAILSMPHLMD 194
Query: 542 KXRTKTXCIDN 574
+ CIDN
Sbjct: 195 NC-DENFCIDN 204
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAIL 149
ERI YY E G KYVPRAIL
Sbjct: 45 ERITSYYKEMEGRKYVPRAIL 65
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/122 (36%), Positives = 67/122 (54%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD RK++E+C+ LQGF
Sbjct: 79 DEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGF 138
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ + + +SV P Q T++ VEPYN+ L+ H
Sbjct: 139 LVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV-VEPYNSILTTHTT 197
Query: 536 VE 541
+E
Sbjct: 198 LE 199
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 83.8 bits (198), Expect = 9e-17
Identities = 41/122 (33%), Positives = 64/122 (52%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D R+ +E C LQGF
Sbjct: 76 DEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +S+ P Q T++ VEPYN+ L+ H
Sbjct: 136 LIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSM-VEPYNSLLTTHTT 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/135 (31%), Positives = 67/135 (49%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ +++C LQGF ++ Y + +S+ P A +T
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAV 179
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 180 VEPYNSILTTHTTLE 194
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/135 (31%), Positives = 67/135 (49%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ +++C LQGF ++ Y + +S+ P A +T
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAV 179
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 180 VEPYNSILTTHTTLE 194
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/135 (31%), Positives = 67/135 (49%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ +++C LQGF ++ Y + +S+ P Q T +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAV- 179
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 180 VEPYNSILTTHTTLE 194
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/135 (31%), Positives = 67/135 (49%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ +++C LQGF ++ Y + +S+ P A +T
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAV 179
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 180 VEPYNSILTTHTTLE 194
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 81.4 bits (192), Expect = 5e-16
Identities = 41/135 (30%), Positives = 66/135 (48%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ +++C LQGF ++ Y + +S+ P A +T
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAV 179
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 180 VEPYNSILTTHTTLE 194
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 81.4 bits (192), Expect = 5e-16
Identities = 41/135 (30%), Positives = 66/135 (48%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ +++C LQGF ++ Y + +S+ P A +T
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAV 179
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 180 VEPYNSILTTHTTLE 194
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/135 (29%), Positives = 67/135 (49%)
Frame = +2
Query: 137 PRHXXXXXXXXXXDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVX 316
PR D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 317 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLX 496
R+ + +C+ LQGF ++ Y + +S+ P Q T++
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSV- 178
Query: 497 VEPYNATLSXHQLVE 541
VEPYN+ L+ H +E
Sbjct: 179 VEPYNSILTTHTTLE 193
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/122 (31%), Positives = 62/122 (50%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD R+ +++C LQGF
Sbjct: 76 DEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +S+ P A +T VEPYN+ L+ H
Sbjct: 136 LVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP-APQVSTAVVEPYNSILTTHTT 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/122 (31%), Positives = 62/122 (50%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD R+ +++C LQGF
Sbjct: 75 DEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 134
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +S+ P A +T VEPYN+ L+ H
Sbjct: 135 LVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP-APQVSTAVVEPYNSILTTHTT 193
Query: 536 VE 541
+E
Sbjct: 194 LE 195
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/122 (31%), Positives = 62/122 (50%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD R+ +++C LQGF
Sbjct: 76 DEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +S+ P A +T VEPYN+ L+ H
Sbjct: 136 LVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP-APQVSTAVVEPYNSILTTHTT 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/122 (31%), Positives = 62/122 (50%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD R+ +++C LQGF
Sbjct: 76 DEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +S+ P A +T VEPYN+ L+ H
Sbjct: 136 LVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP-APQVSTAVVEPYNSILTTHTT 194
Query: 536 VE 541
+E
Sbjct: 195 LE 196
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/122 (31%), Positives = 62/122 (50%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D R+ E+C LQGF
Sbjct: 81 DEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGF 140
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + + + P Q T++ VEPYN+ L+ H
Sbjct: 141 LVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSM-VEPYNSILTTHTT 199
Query: 536 VE 541
+E
Sbjct: 200 LE 201
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/133 (29%), Positives = 66/133 (49%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D ++ +E+C+ LQGF
Sbjct: 82 DEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 141
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +++ P Q T++ VEPYN+ L H
Sbjct: 142 VIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM-VEPYNSILMTHTT 200
Query: 536 VEKXRTKTXCIDN 574
+E T +DN
Sbjct: 201 LEHSDC-TFMVDN 212
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAI 146
E IN ++ E +GGK+VPR +
Sbjct: 53 ETINTFFAETAGGKHVPRCL 72
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/133 (29%), Positives = 66/133 (49%)
Frame = +2
Query: 176 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D ++ +E+C+ LQGF
Sbjct: 54 DEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++ Y + +++ P Q T++ VEPYN+ L H
Sbjct: 114 VIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM-VEPYNSILMTHTT 172
Query: 536 VEKXRTKTXCIDN 574
+E T +DN
Sbjct: 173 LEHSDC-TFMVDN 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 87 ERINVYYNEASGGKYVPRAI 146
E IN ++ E +GGK+VPR +
Sbjct: 25 ETINTFFAETAGGKHVPRCL 44
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 182 VRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
++S F +F DN GAGNNWA G Y +G E+ + ++D+ +E+E+ + L G
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGI 137
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++RE +P + + TYSV + + T + V PYN LS +L
Sbjct: 138 LFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRL 197
Query: 536 VE 541
+E
Sbjct: 198 IE 199
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 182 VRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVXRKESESCDCLQGF 355
++S F +F DN GAGNNWA G Y +G E+ + ++D+ +E+E+ + L G
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGI 137
Query: 356 QXXXXXXXXXXXXXXXXXXXKIREXYPDRXMNTYSVAPLAQSXTTLXVEPYNATLSXHQL 535
++RE +P + + TYSV + + T + V PYN LS +L
Sbjct: 138 LFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRL 197
Query: 536 VE 541
+E
Sbjct: 198 IE 199
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 121 AASTCPAPFYVDLEPXTMGLCPLRTFRTDL 210
A++TCPA Y + T G CP + + L
Sbjct: 492 ASTTCPANHYCYYDGTTYGCCPTQAYTCSL 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,153,828
Number of Sequences: 27780
Number of extensions: 257713
Number of successful extensions: 778
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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