Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1781
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62899-1|AAC51187.1|  541|Homo sapiens ceramide UDPgalactosyltra...    31   5.8  
U32370-1|AAC50815.1|  541|Homo sapiens UDP-galactose ceramide ga...    31   5.8  
U30930-1|AAC50565.1|  541|Homo sapiens UDP-Galactose ceramide ga...    31   5.8  
BC141815-1|AAI41816.1|  647|Homo sapiens Wolf-Hirschhorn syndrom...    31   5.8  
BC075069-1|AAH75069.1|  541|Homo sapiens UGT8 protein protein.         31   5.8  
BC070176-1|AAH70176.1|  152|Homo sapiens WHSC1 protein protein.        31   5.8  
AL132868-5|CAM15222.1|  647|Homo sapiens Wolf-Hirschhorn syndrom...    31   5.8  
AF178206-1|AAF23369.1|  647|Homo sapiens MMSET type I protein.         31   5.8  
AF083390-1|AAD19345.1|  647|Homo sapiens putative WHSC1 protein ...    31   5.8  
AF083389-1|AAD19344.1|  647|Homo sapiens putative WHSC1 protein ...    31   5.8  
AF071594-1|AAC24151.1|  647|Homo sapiens MMSET type I protein.         31   5.8  
AK026836-1|BAB15567.1|  168|Homo sapiens protein ( Homo sapiens ...    30   7.7  

>U62899-1|AAC51187.1|  541|Homo sapiens ceramide
           UDPgalactosyltransferase protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +3

Query: 237 EVFRALSGFKVRNRSLYRVRSGMYANVSRTVSGCGVSGELFWSFNSLIRI----HFNSTP 404
           E++ AL   KV N   YR R+   + + +   G  V+  ++W  + +IR     H  +  
Sbjct: 408 ELYEAL--VKVINNPSYRQRAQKLSEIHKDQPGHPVNRTIYW-IDYIIRHNGAHHLRAAV 464

Query: 405 HSKSICMYFL*LDYRILIV 461
           H  S C YFL LD   +++
Sbjct: 465 HQISFCQYFL-LDIAFVLL 482


>U32370-1|AAC50815.1|  541|Homo sapiens UDP-galactose ceramide
           galactosyl transferase protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +3

Query: 237 EVFRALSGFKVRNRSLYRVRSGMYANVSRTVSGCGVSGELFWSFNSLIRI----HFNSTP 404
           E++ AL   KV N   YR R+   + + +   G  V+  ++W  + +IR     H  +  
Sbjct: 408 ELYEAL--VKVINNPSYRQRAQKLSEIHKDQPGHPVNRTIYW-IDYIIRHNGAHHLRAAV 464

Query: 405 HSKSICMYFL*LDYRILIV 461
           H  S C YFL LD   +++
Sbjct: 465 HQISFCQYFL-LDIAFVLL 482


>U30930-1|AAC50565.1|  541|Homo sapiens UDP-Galactose ceramide
           galactosyl transferase protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +3

Query: 237 EVFRALSGFKVRNRSLYRVRSGMYANVSRTVSGCGVSGELFWSFNSLIRI----HFNSTP 404
           E++ AL   KV N   YR R+   + + +   G  V+  ++W  + +IR     H  +  
Sbjct: 408 ELYEAL--VKVINNPSYRQRAQKLSEIHKDQPGHPVNRTIYW-IDYIIRHNGAHHLRAAV 464

Query: 405 HSKSICMYFL*LDYRILIV 461
           H  S C YFL LD   +++
Sbjct: 465 HQISFCQYFL-LDIAFVLL 482


>BC141815-1|AAI41816.1|  647|Homo sapiens Wolf-Hirschhorn syndrome
           candidate 1 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630


>BC075069-1|AAH75069.1|  541|Homo sapiens UGT8 protein protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +3

Query: 237 EVFRALSGFKVRNRSLYRVRSGMYANVSRTVSGCGVSGELFWSFNSLIRI----HFNSTP 404
           E++ AL   KV N   YR R+   + + +   G  V+  ++W  + +IR     H  +  
Sbjct: 408 ELYEAL--VKVINNPSYRQRAQKLSEIHKDQPGHPVNRTIYW-IDYIIRHNGAHHLRAAV 464

Query: 405 HSKSICMYFL*LDYRILIV 461
           H  S C YFL LD   +++
Sbjct: 465 HQISFCQYFL-LDIAFVLL 482


>BC070176-1|AAH70176.1|  152|Homo sapiens WHSC1 protein protein.
          Length = 152

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 101 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 135


>AL132868-5|CAM15222.1|  647|Homo sapiens Wolf-Hirschhorn syndrome
           candidate 1 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630


>AF178206-1|AAF23369.1|  647|Homo sapiens MMSET type I protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630


>AF083390-1|AAD19345.1|  647|Homo sapiens putative WHSC1 protein
           protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630


>AF083389-1|AAD19344.1|  647|Homo sapiens putative WHSC1 protein
           protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630


>AF071594-1|AAC24151.1|  647|Homo sapiens MMSET type I protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 259 PLKARN-TSDASDSAIGYSDATTTLTSLPEIRNLW 158
           PLK RN  S A+ SA+G+S +++   SL E   LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630


>AK026836-1|BAB15567.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23183 fis, clone LNG11477. ).
          Length = 168

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 631 PTPFEIHEIRFSCNSSLIVSTPASDLYVL 717
           P   E+H+++F  +S +I ST  S+LY L
Sbjct: 18  PVKIELHQVQFHSSSQMIFSTLRSELYKL 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,211,041
Number of Sequences: 237096
Number of extensions: 1508044
Number of successful extensions: 2494
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2483
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)