Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1781
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032630-9|CAA21565.1|  369|Caenorhabditis elegans Hypothetical ...    32   0.50 
Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical ...    31   0.87 
AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical ...    31   0.87 
AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical ...    31   0.87 
AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical ...    31   0.87 
Z22181-13|CAA80184.3|  632|Caenorhabditis elegans Hypothetical p...    29   4.7  
U00066-2|AAA50741.2|  248|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>AL032630-9|CAA21565.1|  369|Caenorhabditis elegans Hypothetical
           protein Y62H9A.9 protein.
          Length = 369

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 501 LMRSRKPTNIFKKKRLIFDSLVKENTY-KLTSNEEC 397
           L+R+ +PT+I+KKK L+F    +  TY  L  N  C
Sbjct: 149 LVRTNRPTDIYKKKYLLFPVSFRAETYCTLVVNPHC 184


>Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 712 HINRMQEWKLLN*NYKKTLF--RGFQTV*VK---SIKKRLPYNRLTLTVPRYLV 566
           H  R +EW LLN N  +  +   G +   VK   S+K+R  +  +TLT P Y++
Sbjct: 233 HYKRNEEWHLLNLNVSEEKYEHEGVEVSEVKFEISLKRRPLFYMVTLTFPSYIM 286


>Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 712 HINRMQEWKLLN*NYKKTLF--RGFQTV*VK---SIKKRLPYNRLTLTVPRYLV 566
           H  R +EW LLN N  +  +   G +   VK   S+K+R  +  +TLT P Y++
Sbjct: 228 HYKRNEEWHLLNLNVSEEKYEHEGVEVSEVKFEISLKRRPLFYMVTLTFPSYIM 281


>AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 712 HINRMQEWKLLN*NYKKTLF--RGFQTV*VK---SIKKRLPYNRLTLTVPRYLV 566
           H  R +EW LLN N  +  +   G +   VK   S+K+R  +  +TLT P Y++
Sbjct: 233 HYKRNEEWHLLNLNVSEEKYEHEGVEVSEVKFEISLKRRPLFYMVTLTFPSYIM 286


>AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 712 HINRMQEWKLLN*NYKKTLF--RGFQTV*VK---SIKKRLPYNRLTLTVPRYLV 566
           H  R +EW LLN N  +  +   G +   VK   S+K+R  +  +TLT P Y++
Sbjct: 228 HYKRNEEWHLLNLNVSEEKYEHEGVEVSEVKFEISLKRRPLFYMVTLTFPSYIM 281


>AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 712 HINRMQEWKLLN*NYKKTLF--RGFQTV*VK---SIKKRLPYNRLTLTVPRYLV 566
           H  R +EW LLN N  +  +   G +   VK   S+K+R  +  +TLT P Y++
Sbjct: 233 HYKRNEEWHLLNLNVSEEKYEHEGVEVSEVKFEISLKRRPLFYMVTLTFPSYIM 286


>AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 712 HINRMQEWKLLN*NYKKTLF--RGFQTV*VK---SIKKRLPYNRLTLTVPRYLV 566
           H  R +EW LLN N  +  +   G +   VK   S+K+R  +  +TLT P Y++
Sbjct: 228 HYKRNEEWHLLNLNVSEEKYEHEGVEVSEVKFEISLKRRPLFYMVTLTFPSYIM 281


>Z22181-13|CAA80184.3|  632|Caenorhabditis elegans Hypothetical
           protein ZK632.7 protein.
          Length = 632

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 210 YPIALSDASEVFRALSGFKVRNRSLYRVRSGMYANVSRTVSGCGVSGELFWSF 368
           YP+A +   + F   SG      + +R+ S M  NVS  +SG G    L WS+
Sbjct: 323 YPLAGTLMEKHFDTKSGTFFDPNNGFRISSPM--NVSMPISGTGAHETLIWSY 373


>U00066-2|AAA50741.2|  248|Caenorhabditis elegans Hypothetical
           protein R12B2.3 protein.
          Length = 248

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = -1

Query: 597 D*HSLCHVI**EHDRSAEV*RSLKYSVMTILKLMRSRKPTNIFKKKRLIFDSLVKENTYK 418
           D HS+C  +     RS    RSL  S  +IL L ++ K T+     ++ F S++  NT  
Sbjct: 54  DVHSMCSQLSNLGPRSLPNARSLGSSTSSILLLHKTYKETSAPPPNQVAFKSVILANTQL 113

Query: 417 LT 412
           +T
Sbjct: 114 VT 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,830,551
Number of Sequences: 27780
Number of extensions: 282000
Number of successful extensions: 610
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)