Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1773
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.34 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   7.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   7.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 580 KATQGRGEGSPGPDEDKISEAEVCGGQH*EKRRRLK 473
           K  Q  GEG+   D+D+ +E E  G    E  +RLK
Sbjct: 268 KRRQNDGEGADDRDDDEENEEEEDGRGQSEAEKRLK 303


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -3

Query: 630 WEGASHLINQVVKDLVPKQHKDVVKEVLDQTKIKFPKPRCVAANTRRKG 484
           W   S L+N+ V    PK H   +K      +I+ P    V A T + G
Sbjct: 137 WVLDSGLVNRTVPVCAPKLHVFDLKTSNHLKQIEIPHDIAVNATTGKGG 185


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 391 ILDVIYDPQDLRVRPSG 341
           +LD I    D R+RPSG
Sbjct: 35  VLDNILGGYDARIRPSG 51


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 391 ILDVIYDPQDLRVRPSG 341
           +LD I    D R+RPSG
Sbjct: 35  VLDNILGGYDARIRPSG 51


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 275 CMAPLFLLYLPNAYI*VNTKEL 210
           C  P F+LYL   ++ V   ++
Sbjct: 318 CWLPFFILYLATPFVPVEPPDI 339


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 370 PQDLRVRPSGLDQLKRLRGVPRD 302
           P DLR   S +  L R  G P D
Sbjct: 214 PSDLRTIYSRVRNLNRTHGFPND 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,288
Number of Sequences: 438
Number of extensions: 5011
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)