Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1772
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 49 6e-07
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 48 1e-06
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 48 1e-06
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 40 3e-04
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 37 0.002
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 33 0.030
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 30 0.37
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 29 0.85
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 29 0.85
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 28 1.5
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 27 2.6
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 27 3.4
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 26 4.5
SPBC8D2.15 |||mitochondrial lipoic acid synthetase |Schizosaccha... 26 6.0
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 7.9
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 49.2 bits (112), Expect = 6e-07
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 GATALWCASGAGHLAIVKRLV-KAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGAD 523
G T L A+G G L+IV+ L KA + TPL A G++ +VKYL+ A
Sbjct: 107 GQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAP 166
Query: 524 IHKANKYNNTCLMIAAYKGYLDVVQFLLDSGA 619
++ ++ Y T L A +G+ DV L+ +GA
Sbjct: 167 LNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198
Score = 45.2 bits (102), Expect = 9e-06
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +2
Query: 341 IEGATALWCASGAGHLAIVKRLVKAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGA 520
++G T L A+ G + +VK L+ A +N + TPL A EG D+ LVR GA
Sbjct: 139 LQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198
Query: 521 DIHKANKYNNTCLMI 565
D + + N+T L +
Sbjct: 199 DTLRKDSENHTALEV 213
Score = 34.3 bits (75), Expect = 0.017
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 488 DIVKYLV-RHGADIHKANKYNNTCLMIAAYKGYLDVVQFLLDSGAR-VDDRALCGATALH 661
++++ L+ R D + TCL AA KG L +VQ L D + + L G T LH
Sbjct: 87 NVIEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLH 146
Query: 662 FAAECG 679
AA G
Sbjct: 147 RAAAVG 152
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 48.4 bits (110), Expect = 1e-06
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +2
Query: 347 GATALWCASGAGHLAIVKRLVKAGADVNHATRTV-STPLRAACFEGRLDIVKYLVRHGAD 523
GATAL A+ + I K L++ GADVN + + P+ A G + V YLV+HGAD
Sbjct: 34 GATALHWAALNQQIPICKFLLEHGADVNAIGGDLQAAPIHWAAKRGSVKTVHYLVQHGAD 93
Query: 524 IHKANKYNNTCLMIAAYKGYLDVVQFLLDSGARVDDR 634
+K CL +A + +V +LL VD R
Sbjct: 94 PLLKDKQGFNCLHLAVHAASPLLVVYLLHLDISVDLR 130
Score = 45.2 bits (102), Expect = 9e-06
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +2
Query: 356 ALWCASGAGHLAIVKRLVKAGA-DVNHATRTVSTPLRAACFEGRLDIVKYLVRHGADIHK 532
+L+ A+ G L VK L+ + DVN +T L A ++ I K+L+ HGAD++
Sbjct: 3 SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNA 62
Query: 533 -ANKYNNTCLMIAAYKGYLDVVQFLLDSGARVDDRALCGATALHFAAECGPPAVRLF 700
+ AA +G + V +L+ GA + G LH A P + ++
Sbjct: 63 IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVY 119
Score = 29.1 bits (62), Expect = 0.64
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +2
Query: 344 EGATALWCASGAGHLAIVKRLVKAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGAD 523
+G L A A +V L+ V+ TPL A + G I L+R GAD
Sbjct: 100 QGFNCLHLAVHAASPLLVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGAD 159
Query: 524 IHKANKYNNTCLMIAAYKGYLDVVQFLLDSG 616
+ ++ T L + G L ++ +L G
Sbjct: 160 VLATDEDKMTPLHWSIVGGNLKCMKLILKEG 190
Score = 27.5 bits (58), Expect = 2.0
Identities = 26/95 (27%), Positives = 38/95 (40%)
Frame = +2
Query: 341 IEGATALWCASGAGHLAIVKRLVKAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGA 520
++ A W A G + V LV+ GAD + L A +V YL+
Sbjct: 67 LQAAPIHWAAK-RGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLLHLDI 125
Query: 521 DIHKANKYNNTCLMIAAYKGYLDVVQFLLDSGARV 625
+ + +T LM A+Y G + LL GA V
Sbjct: 126 SVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADV 160
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 48.0 bits (109), Expect = 1e-06
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +2
Query: 359 LWCASGAGHLAIVKRLVKAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGADIHKAN 538
L C G L IV+ L+ AG + N + +T L A R + VK L++ GA+ +
Sbjct: 339 LTCCVGDYDL-IVEELILAGFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGANPSARD 397
Query: 539 KYNN-TCLMIAAYKGYLDVVQFLLDSGARVDDRALCGATALHFAAECG 679
N+ T LM+A+ G ++V L+ SGA VD+ G TA+ A G
Sbjct: 398 FLNSWTPLMLASATGLSEIVSILVASGASVDEVDSSGWTAMEQAVVRG 445
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 359 LWCASGAGHLAIVKRLVKAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGADIHKAN 538
+W A+ G +V + + +G N A TP+ AA G D++K LV G DI+ +
Sbjct: 8 IWIAASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRD 67
Query: 539 KYNNTCLMI 565
+ T L +
Sbjct: 68 QDGETPLFV 76
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 347 GATALWCASGAGHLAIVKRLVKAGADVNHATRTVSTPL 460
G T + A GH ++K LV+ G D+N + TPL
Sbjct: 37 GYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 245 HGREGAVRILLEKFRPPVCLETEGTVKFDEYVIEGATALWCASGAGHLAIVKRLVKAGAD 424
H EG + L + PP + + D G T+L A GH+ ++K L++A AD
Sbjct: 221 HPEEGRIPSFL--YSPPPDFQVNSVIDDD-----GHTSLHWACSMGHIEMIKLLLRANAD 273
Query: 425 VNHATRTVSTPL-RAACFEGRLD 490
+ R TPL R+ F D
Sbjct: 274 IGVCNRLSQTPLMRSVIFTNNYD 296
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 33.5 bits (73), Expect = 0.030
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 356 ALWCASGAGHLAIVKRLVKA-GADVNHATRTVSTPLRAACFEGRLDIVKYLVRH-GADIH 529
AL+ + ++ +VK ++ DVN + +TPL A GR DIV+ L+ H + +
Sbjct: 58 ALFISIQCANVQMVKHILSVFDVDVNAYDKNKNTPLHLAAMAGRQDIVEALLLHPDINYN 117
Query: 530 KANKYNNTCLMIAAYKGYLDVVQ 598
N N +A +D ++
Sbjct: 118 LVNANNKKAYQVATSPQLMDFMK 140
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 29.9 bits (64), Expect = 0.37
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 23 IKCTMEREDNDRLVLFNELAN-SLRERVFFAARDGMSLTLYALLYEKKTDEIDDLLNNDV 199
++ T E N L + +EL + SL E FF ++ LY ++ ++ +L
Sbjct: 137 LQSTNENSINASLDVLDELVDESLVEEQFFIIAPQLASILYQFIFSAPPNDSMRMLQARG 196
Query: 200 CSDGVKCTPLITAARHGREGAVRILLEKFRPP 295
C LI + + VR+ LE+ PP
Sbjct: 197 IKLFRSCLELIEIYKETKAEHVRVFLEQILPP 228
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 28.7 bits (61), Expect = 0.85
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 425 VNHATRTVSTPLRAACFEGRLDIVKYLVRHGADIHKANKYNNTCLMIAAYKGYLDVVQFL 604
VN + R++ L AAC G + +L G D++K + T L A+ + D+ L
Sbjct: 858 VNESGRSL-LHLTAAC--GLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNL 914
Query: 605 LDSGARVD 628
L +GA+ D
Sbjct: 915 LSNGAKPD 922
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 28.7 bits (61), Expect = 0.85
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 105 NTRSLNEFASSLNKTRRSLSSLSIVHL 25
N +++ F S KTR+SLSSL+ +HL
Sbjct: 835 NNEAIHNFDFSKPKTRQSLSSLTTLHL 861
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 380 GHLAIVKRLVKA-GADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGADIHKANKYNNTC 556
G L +VK LV+ +N + +PL A G +VK+L+ +GA + C
Sbjct: 63 GDLEVVKSLVENYNTPINQVDQFDYSPLVLASLCGHEPVVKFLLENGALCERDTFQGERC 122
Query: 557 L 559
L
Sbjct: 123 L 123
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -2
Query: 423 SAPALTR-RFTIAK*PAPEAHHSAVAPSITYSSNLTVPSVSKQTGGL--NFSNKILTAP 256
+AP T +FTI PAP + P + +S ++PS + Q+ + N NK ++P
Sbjct: 438 AAPVFTPGKFTIPSKPAPVNASRPMMPQQSNNSEASIPSTTPQSPSVVSNGENKPSSSP 496
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 486 RRPSKQAARRGVLTVLVAWLTSAPALTRRFTIAK*PAPEAHHSA 355
+RP+ + G+ L A S PA T +FT K PA A++ +
Sbjct: 48 KRPTSGVSSPGIFANLAAKPVSLPASTTQFTFGK-PAVTANNDS 90
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 344 EGATALWCASGAGHLAIVKRLVKAGADVNHATRTVSTPL-RAACFEGRLDIVKYLV 508
+G TAL A+ G+L ++ L++AGA+V T L R F D+ + V
Sbjct: 236 DGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSLMRCVMFTMNYDLQTFEV 291
>SPBC8D2.15 |||mitochondrial lipoic acid synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 370
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 374 GAGHLAIVKRLVKAGADVNHATRTVSTPLRAACFEGRLDIVKYLVRHGADIHKAN 538
GA H+A K + K H TP F GR+D+V+ + + G D+ N
Sbjct: 183 GANHIA--KTIQKIKEKAPHILVEALTP----DFSGRMDLVEIVAKSGLDVFAHN 231
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 294 GGLNFSNKILTAPSRPCLAAVMRGVHLTPSL 202
G L+ SN T+P P A RG+++ P+L
Sbjct: 239 GKLDLSNSNPTSPVSPSSMASRRGLNIPPTL 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,792,647
Number of Sequences: 5004
Number of extensions: 54982
Number of successful extensions: 222
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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