Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1771
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0038 + 20121924-20122080,20123182-20123843 34 0.14
05_02_0052 + 6124880-6124956,6125097-6125250,6125327-6125920,612... 33 0.18
04_03_0252 - 13517763-13517861,13518845-13519315,13519400-135196... 33 0.32
07_03_1080 + 23815232-23817040 32 0.56
03_01_0151 + 1206555-1206998,1207112-1207543 32 0.56
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 31 0.74
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 31 0.74
11_06_0016 - 19284810-19284926,19285527-19286879 31 1.3
10_08_0606 - 19164215-19164619 31 1.3
05_01_0142 - 940421-940701,941262-941574 31 1.3
04_03_0380 - 15150814-15152304 31 1.3
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 31 1.3
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 31 1.3
03_04_0028 + 16604137-16604142,16604513-16604848 30 1.7
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 30 1.7
02_02_0414 + 9972157-9972257,9972925-9973003,9973657-9973755,997... 30 1.7
08_02_1005 + 23468230-23468994 30 2.3
05_02_0072 - 6334613-6335215 29 3.0
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 3.0
06_03_1456 + 30283777-30284325,30284419-30284835,30284980-30285060 29 3.9
06_03_0526 + 21771519-21771607,21771685-21771810,21771890-217720... 29 3.9
04_03_0868 - 20420298-20420915 29 3.9
10_08_1017 - 22268957-22269279,22269784-22269934,22270084-222701... 29 5.2
07_03_0775 - 21413522-21413797,21414016-21414178,21414274-214143... 29 5.2
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086... 29 5.2
03_05_0501 - 24944533-24945507 29 5.2
03_02_0207 - 6411324-6412895 29 5.2
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.2
11_05_0003 + 18256324-18256866,18257018-18257392,18258287-182585... 28 6.9
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608 28 6.9
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 28 9.1
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355... 28 9.1
05_03_0356 + 12894195-12894237,12894347-12894484,12894868-128950... 28 9.1
05_02_0160 - 7194699-7195019,7195207-7195368,7195806-7195953,719... 28 9.1
04_03_0348 + 14735581-14737071 28 9.1
03_05_0490 + 24866418-24867008 28 9.1
01_06_0637 + 30763657-30763858,30765600-30766261 28 9.1
01_01_0674 + 5162291-5162376,5162530-5162560,5162689-5163207,516... 28 9.1
>03_05_0038 + 20121924-20122080,20123182-20123843
Length = 272
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 36 QCEMIIY*LFTKWRGGG-IGMVYLWASRIRRRSRCLVEGRRLEPWASVAFTCKEDSLRPH 212
+C ++ WRGGG + W R RRR CL EG SV C E++ H
Sbjct: 203 ECSRVVDPPLHMWRGGGRVAQHQEWRPRPRRRCECLEEG------GSVLACCTEEAEGRH 256
Query: 213 NI 218
+I
Sbjct: 257 DI 258
>05_02_0052 +
6124880-6124956,6125097-6125250,6125327-6125920,
6126344-6126757,6126835-6126846
Length = 416
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEEL 502
ER+R LND+ LR V+P P+ +K K + L+ AK+Y+ + + + EL
Sbjct: 252 ERKRREKLNDSFKALRDVLP----PATKK-DKASVLMRAKDYVNVLKARIAEL 299
>04_03_0252 -
13517763-13517861,13518845-13519315,13519400-13519679,
13519747-13519829
Length = 310
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLVAYL 523
ER R LN+ L LR V+ P++ K+ K + + A YI + +++ R VA L
Sbjct: 98 ERDRRRKLNEKLYALRSVV-----PNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAAL 152
Query: 524 QGTATAAGIVPPPGFDLAG 580
+ +A AA P AG
Sbjct: 153 E-SAAAASAAPAAANPFAG 170
>07_03_1080 + 23815232-23817040
Length = 602
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 158 GAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTS 259
G G GG Y GGQ PPP Y + Q E G +
Sbjct: 58 GGGGGGGGYYYGGQQPPPSQYYYLEPYQEECGNA 91
>03_01_0151 + 1206555-1206998,1207112-1207543
Length = 291
Score = 31.9 bits (69), Expect = 0.56
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Frame = +2
Query: 188 QGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDL 367
Q PP + + P P E + K + + + R+ A ER R +
Sbjct: 73 QAAAPPVTAPATRAERRRKRPRPRPRAAPPPEKRKKPE--EAENQRMTHIAVERNRRRLM 130
Query: 368 NDALDELRGVIPYAHSPSVRKLSKIATLL-----LAKNYIMMQASALEELRRLVAYLQGT 532
ND L LR +IP + P + + + + L + + +QA+A E V T
Sbjct: 131 NDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAERSGVGVVAAAAT 190
Query: 533 ATAAGIVPPPGF 568
A + G+ P +
Sbjct: 191 AASDGVFVSPQY 202
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 101 PLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYG 265
P + ++ P PG+ P GA G Y Q PPP P + P G +YG
Sbjct: 488 PQQDPYARPYGGPGQWAPRGAPAGDGTY----QAPPPTSYGPPSQQPPAYGQTYG 538
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 31.5 bits (68), Expect = 0.74
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Frame = +2
Query: 56 LIVYKMEGRRNWDGVPLGESHSPPQSVPGRRT-PLGAVGLGGF----YMQGGQPPPPQHC 220
+I ++ G+ VP G P +VP T P GG+ YM PPPP
Sbjct: 377 VIAVRVAGKPPQPAVPPG-----PPAVPAPPTYPPADPAAGGYTSQPYMGAPPPPPPGSY 431
Query: 221 YPTDENQPEPGTSYGQRPVNES 286
P QP P SY P S
Sbjct: 432 APVPWGQPPPYASYPPPPPGSS 453
>11_06_0016 - 19284810-19284926,19285527-19286879
Length = 489
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 549 LCPHRVSI*PVFQRQPSSFSLQPRAPRRPQNHPL 650
LC + P F +QPSS S Q P RP HP+
Sbjct: 24 LCHSKGRKPPTFSQQPSSLSSQFSLPSRPPLHPV 57
>10_08_0606 - 19164215-19164619
Length = 134
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 95 GVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPP 211
GVP +SHS PGR T + GG +M G PP
Sbjct: 70 GVPYSDSHSS----PGRATVIAPAATGGGFMDGHSVLPP 104
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +2
Query: 95 GVPLGESHSPPQSVP--GRRTPLGAVGL--GGFYMQGGQPPPPQHCYPTDENQPEPG 253
GV G + P Q P G P GA G + G PPP YP P+PG
Sbjct: 22 GVAGGHGYPPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPG 78
>04_03_0380 - 15150814-15152304
Length = 496
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 395 VIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLVAYLQGTATAAGIVPPPGFDL 574
++PY V + K+A LL A+ + + + RRL+A +G A G+V PGF
Sbjct: 15 MVPYPAQGHVTPMLKLAKLLHARGFHVTFVNTEFNHRRLLA-TRGAAALDGVV--PGFRF 71
Query: 575 AG 580
AG
Sbjct: 72 AG 73
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEEL----RRL 511
ER+R LND+ L+ V+P P +K K + L+ A+ Y+ S L EL R L
Sbjct: 293 ERKRREKLNDSFLALKAVLP----PGSKK-DKTSILIRAREYVKSLESKLSELEEKNREL 347
Query: 512 VAYLQGTATAA 544
A L AA
Sbjct: 348 EARLASRPAAA 358
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEEL 502
ER+R LND+ L+ V+P P +K K + L+ A+ Y+ S L EL
Sbjct: 239 ERKRREKLNDSFVALKAVLP----PGSKK-DKTSILIRAREYVKSLESKLSEL 286
>03_04_0028 + 16604137-16604142,16604513-16604848
Length = 113
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +2
Query: 71 MEGRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDEN---Q 241
+E RN + +PL +S +PP S+P + + + PPPQ D+N
Sbjct: 5 LEVARNRNKIPLPKSIAPPGSIP-LPPEQDTLLSQNYQLLAPLKPPPQFEETEDDNAGAN 63
Query: 242 PEPGTSYGQRPVNESKSKHKMRQ-GKTVRLNIN----ARERRRMHDLN 370
P P ++ N + + ++ Q G+ V +N A+ R M LN
Sbjct: 64 PTPTSNPSNPSPNNLQEQQQLPQHGQRVSFQLNAVAAAKRRGTMDQLN 111
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +2
Query: 101 PLGESHSPPQSVPGR---RTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQR 271
P G +PP G + P+ +V G++MQ PPPP + P PEP R
Sbjct: 1225 PHGNFPAPPAPYHGNNYHQPPMASVPNEGYHMQPPPPPPPINQCP--YRPPEP--QQRPR 1280
Query: 272 PVNESKSKHKMRQGKTVRLNINARERRRMH 361
P + + S + R + R RR H
Sbjct: 1281 PWSNNSSSYPERYRYDGHDRDHHRHDRRHH 1310
>02_02_0414 +
9972157-9972257,9972925-9973003,9973657-9973755,
9973848-9973913,9974225-9974376,9974503-9974584,
9974696-9974781,9974919-9975098,9975320-9975717,
9976192-9976790,9977141-9977239
Length = 646
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 191 GGQPPPPQHCYPTDENQPEPGTSYGQRPV 277
GG PPPP + +N P+P T GQ P+
Sbjct: 419 GGLPPPPWEIQQSMDNPPQP-TQLGQMPL 446
>08_02_1005 + 23468230-23468994
Length = 254
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 467 YIMMQASALEELRRLVAYLQGTATAAGIVPPPGFDLAG 580
Y + + A ++ R ++ L+G + AG++PPP D G
Sbjct: 157 YAIRRKDASDDDRHVLRLLRGVSMGAGVLPPPPADRRG 194
>05_02_0072 - 6334613-6335215
Length = 200
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 221 NNVVGAEAVLLACKSHRGPRLQAASFDQAPTAAANATRPK 102
NNV+G +L C+ P AAS APT + AT P+
Sbjct: 121 NNVLGTHVLLEPCRRKAPPAPSAASSTSAPT-RSTATLPR 159
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 116 HSPPQSVPGRRTPLGAVGLGGFYM---QGGQPPPPQHCYPTDENQPEP 250
H PP P P GG Y Q G PPPP H + P P
Sbjct: 125 HPPPPPPPP--PPFKGDHYGGVYQNWQQNGPPPPPDHVLKKVPSHPSP 170
>06_03_1456 + 30283777-30284325,30284419-30284835,30284980-30285060
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = +2
Query: 290 SKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNY 469
SK K +G + N+ A ERRR LND L LR V+P K+SK+ + +
Sbjct: 144 SKKKRVEGMPSK-NLMA-ERRRRKRLNDRLSMLRSVVP--------KISKMDRTSILGDT 193
Query: 470 IMMQASALEELRRL 511
I LE +R+L
Sbjct: 194 IDYMKELLERIRQL 207
>06_03_0526 +
21771519-21771607,21771685-21771810,21771890-21772010,
21772123-21772851,21772954-21773349,21774594-21774665,
21774741-21774803,21775236-21775337
Length = 565
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASAL-EELRRLVAY 520
ERRR +ND+ LR ++P K + +A+ + ++ Q S L E+ R+L A
Sbjct: 330 ERRRRERINDSFQTLRALLPLPPDSKKDKAAILASTTEYMDKLISQVSELGEKNRQLEAQ 389
Query: 521 L 523
L
Sbjct: 390 L 390
>04_03_0868 - 20420298-20420915
Length = 205
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Frame = +2
Query: 200 PPPPQHCYPTDENQ---PEPGT 256
PPPP HCY E Q P P T
Sbjct: 6 PPPPLHCYKAPEEQRLGPRPAT 27
>10_08_1017 -
22268957-22269279,22269784-22269934,22270084-22270164,
22271296-22271374,22273296-22273345
Length = 227
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 69 KWRGGGIGMVYLWASRIRRRSRCLVEGRRL 158
+W GGG+G +YL A + + C RL
Sbjct: 77 RWMGGGVGFLYLLAFKAEAVAACRCRSPRL 106
>07_03_0775 -
21413522-21413797,21414016-21414178,21414274-21414351,
21415983-21416176
Length = 236
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/113 (24%), Positives = 42/113 (37%)
Frame = +2
Query: 161 AVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINA 340
A GGFY P PPQ QP P P + + + T +
Sbjct: 27 AAPAGGFYWT--TPAPPQAAL-----QPPPPQQQPVAPATAAPNACPRSESGTRPSSKAC 79
Query: 341 RERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEE 499
RE+ R LN+ EL V+ +P + K S + + + +A L+E
Sbjct: 80 REKVRRDKLNERFLELGAVLEPGKTPKMDKSSILNDAIRVMAELRSEAQKLKE 132
>06_02_0206 +
13005863-13005966,13006918-13007080,13008534-13008632,
13008704-13008817,13009094-13009254,13009746-13009827,
13009972-13010057,13011563-13011742,13011913-13012424,
13012844-13013478
Length = 711
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 122 PPQSVPGRRTPLGAVGLG-GFYMQGGQPPPPQHCYPTDENQPEPGTSYG 265
PPQ +P + P G G G PPPP P + +Q +PG G
Sbjct: 485 PPQ-LPPQLPPQQPPNYGQGQDQSGDLPPPPWETQPAESDQFQPGQPRG 532
>03_05_0501 - 24944533-24945507
Length = 324
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 185 MQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARE 346
+Q PPPP+ + E QP+ G G + R+ K +R+++ A E
Sbjct: 32 VQPSPPPPPKAPCRSQEEQPDGGGGGGGDDKENVSPEVAPRKAKKMRVSLGAAE 85
>03_02_0207 - 6411324-6412895
Length = 523
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +1
Query: 64 LQNGGAEELGW-CTXXXXXXXXXXXXWSKDAAWSRGPRWLLHARRTASAPTTLLSY 228
L +G A E GW W KDAA R RWL A P + Y
Sbjct: 404 LPDGTAVEAGWFVAYNSYAMGRMESVWGKDAAEFRAERWLEDAAAATFRPESPFRY 459
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Frame = +2
Query: 122 PPQSVPGRRTPLGAVGLGGFYM-QGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKH 298
PPQ + + + + G Y G PPP Q+ P D G ++PV +
Sbjct: 36 PPQPPMRQLSAASSTNIPGDYAAHQGHPPPQQNQPPYDAYGDNFGAKRMRKPVQRRTVDY 95
Query: 299 KMRQGKTVRLNI---NARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKN 466
+ V+ + +AR+R + A+ ++ + Y +PS +K + KN
Sbjct: 96 TSTVVRYVQARMWQRDARDRPTVQPTPAAVLDMLPSVAYPDNPSTSFAAKFVHSSINKN 154
>11_05_0003 +
18256324-18256866,18257018-18257392,18258287-18258514,
18258750-18258920,18259040-18259123
Length = 466
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLVAYL 523
ERRR LND L LR V+P K+SK+ + + I L+++ L L
Sbjct: 283 ERRRRKKLNDRLYMLRSVVP--------KISKMDRASILGDAIEYLKELLQKINDLQNEL 334
Query: 524 QGTATAAGIVPPP 562
+ + + + P P
Sbjct: 335 ESSPATSSLPPTP 347
>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
Length = 325
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 188 ACKSHRGPRLQAASFDQAPTAAANATRPKVHHPNSSAPP 72
AC++ L+A +AP A A A P P APP
Sbjct: 181 ACRAAEPEALEAKKKAEAPVAPAAAPPPPPPQPKKKAPP 219
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 122 PPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQ 268
PP P ++ P GA G Y Q PP H Y Q PG GQ
Sbjct: 802 PPYGAPSQQPPYGAPH-PGHYQQPPHQQPPNHDY---GQQAYPGGWRGQ 846
>06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,
3558919-3560393
Length = 1212
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKL 433
ER+ + D+N L EL G + Y H+P+ K+
Sbjct: 1082 ERQEICDVNGTLTELAGKLCYMHTPADGKV 1111
>05_03_0356 +
12894195-12894237,12894347-12894484,12894868-12895018,
12895399-12895526,12895704-12895840,12896742-12896847,
12898659-12898762,12899159-12899281,12899620-12899700,
12900159-12900304,12902171-12902243,12902970-12903060,
12904978-12905018,12906079-12906153,12906402-12906569,
12907638-12907676,12907759-12907847,12908014-12908078,
12908794-12908840,12908924-12908983,12909168-12909239,
12910143-12910172,12910526-12910617,12910719-12910802,
12911941-12912046,12912171-12912233,12912776-12912870,
12913000-12913180
Length = 875
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 80 RRNWDGVPLGESHSPPQSVPGR--RTPLGAVGL 172
RR DGV L E PP S G+ T GA+GL
Sbjct: 41 RRELDGVGLAEESPPPGSSLGKILSTESGAIGL 73
>05_02_0160 -
7194699-7195019,7195207-7195368,7195806-7195953,
7196286-7196362,7196717-7196787,7196891-7196977,
7197662-7198201,7198430-7198439
Length = 471
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +2
Query: 173 GGFYMQGGQ----PPPPQHCYPTDENQPEPGTSYGQRP 274
GG Y Q Q PPPP+H + P P +Y RP
Sbjct: 8 GGSYQQSWQQNAPPPPPEHVV---KMHPSPPPAYANRP 42
>04_03_0348 + 14735581-14737071
Length = 496
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 395 VIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLVAYLQGTATAAGIVPPPGFDL 574
++PY V + K+A LL A+ + + + RRL+A +G A G+V PGF
Sbjct: 15 MVPYPAQGHVTPMLKLAKLLHARGFHVTFVNTEFNHRRLLA-SRGAAALDGVV--PGFRF 71
Query: 575 A 577
A
Sbjct: 72 A 72
>03_05_0490 + 24866418-24867008
Length = 196
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 200 PPPPQHCYPTDE----NQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARE 346
PPPPQ P + +P+ T+ PV+++ + +G+TV L+ A E
Sbjct: 12 PPPPQPAEPAADPPAKEEPQNTTADAAAPVSDAGAAVAAEEGETVILDAAAGE 64
>01_06_0637 + 30763657-30763858,30765600-30766261
Length = 287
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 137 PGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGK 316
P ++ LG+ G ++ G P P H P+ P P + R S+ + +G+
Sbjct: 6 PLQKVTLGSTVHGSALLEDGPNPLPSHLSPSPSLLPSPKRTPTCRLSPSSRRLDRSGRGR 65
Query: 317 TVRLNINARERRR 355
LN+ + R
Sbjct: 66 EEGLNLKTPKAER 78
>01_01_0674 +
5162291-5162376,5162530-5162560,5162689-5163207,
5165561-5166010,5166050-5166134,5167374-5167399
Length = 398
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEEL 502
ER+R LND+ L+ V+ P+ K K + L+ A+ +I S L EL
Sbjct: 189 ERKRREKLNDSFVALKAVL-----PTGSKKDKASILIRAREHIKSLESKLSEL 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,980,733
Number of Sequences: 37544
Number of extensions: 477334
Number of successful extensions: 2126
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -