Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1771
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82267-6|CAB05189.2| 133|Caenorhabditis elegans Hypothetical pr... 104 8e-23
AL110479-22|CAE17962.1| 105|Caenorhabditis elegans Hypothetical... 104 8e-23
Z82267-7|CAD89743.2| 164|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z96047-3|CAB09412.1| 207|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin p... 57 1e-08
U10402-7|AAA19069.1| 192|Caenorhabditis elegans C. elegans neur... 55 6e-08
U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell l... 48 5e-06
U41110-3|AAA82418.1| 170|Caenorhabditis elegans Helix loop heli... 47 1e-05
U15418-1|AAA67360.1| 71|Caenorhabditis elegans LIN-32 protein. 47 1e-05
U40421-1|AAA81437.2| 178|Caenorhabditis elegans Helix loop heli... 40 0.002
AF037063-1|AAC26105.1| 178|Caenorhabditis elegans twist protein. 40 0.002
U58732-4|AAB00595.1| 147|Caenorhabditis elegans Helix loop heli... 39 0.004
AF369899-1|AAK72958.1| 147|Caenorhabditis elegans Fer3-like pro... 39 0.004
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 34 0.12
Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.50
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 32 0.50
U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop hel... 31 0.66
Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.87
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.5
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 30 2.0
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 30 2.0
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 30 2.0
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 30 2.0
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 30 2.0
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 30 2.0
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 30 2.0
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 29 2.7
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 29 3.5
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 3.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 4.7
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 4.7
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 4.7
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 4.7
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 4.7
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 4.7
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 29 4.7
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 6.2
Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical pr... 28 6.2
U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical pr... 28 6.2
U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein. 28 6.2
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 28 6.2
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 8.1
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 8.1
U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical pr... 28 8.1
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 8.1
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 8.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.1
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 8.1
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 8.1
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 28 8.1
>Z82267-6|CAB05189.2| 133|Caenorhabditis elegans Hypothetical
protein F38C2.2 protein.
Length = 133
Score = 104 bits (249), Expect = 8e-23
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = +2
Query: 320 VRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEE 499
VRL+IN RER RMHDLN+ALD+LR VIPYAH SVRKLSKIATLLLAKN+I+MQA A+EE
Sbjct: 47 VRLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEE 106
Query: 500 LRRLVAYLQ 526
L LV+ L+
Sbjct: 107 LSILVSQLK 115
>AL110479-22|CAE17962.1| 105|Caenorhabditis elegans Hypothetical
protein Y105C5B.29 protein.
Length = 105
Score = 104 bits (249), Expect = 8e-23
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = +2
Query: 320 VRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEE 499
VRL+IN RER RMHDLN+ALD+LR VIPYAH SVRKLSKIATLLLAKN+I+MQA A+EE
Sbjct: 15 VRLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEE 74
Query: 500 LRRLVAYLQ 526
L LV+ L+
Sbjct: 75 LSVLVSQLK 83
>Z82267-7|CAD89743.2| 164|Caenorhabditis elegans Hypothetical
protein F38C2.8 protein.
Length = 164
Score = 89.8 bits (213), Expect = 2e-18
Identities = 44/61 (72%), Positives = 53/61 (86%)
Frame = +2
Query: 344 ERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLVAYL 523
+R RMHDLN+ALD+LR VIPYAH SVRKLSKIATLLLAKN+I+M+A A+EEL LV+ L
Sbjct: 83 KRCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMKAKAIEELSVLVSQL 142
Query: 524 Q 526
+
Sbjct: 143 K 143
>Z96047-3|CAB09412.1| 207|Caenorhabditis elegans Hypothetical
protein DY3.3 protein.
Length = 207
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMR-----QGKTVRLNINARERRRMHDLNDALDEL 388
P E + EP Y +R +E+ + KM+ + +R +IN+RERRRMH+LND + L
Sbjct: 7 PGAEEEFEP---YVRRKRSEAGGRKKMQGLNEQEQNLLRNSINSRERRRMHELNDEFETL 63
Query: 389 RGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELR 505
R +PY + + R++SK TLLLA N+I A+A +L+
Sbjct: 64 RECLPYPNEANSRRMSKANTLLLASNWIKQLANANHKLQ 102
>AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin
protein 1 protein.
Length = 184
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Frame = +2
Query: 266 QRPVNESKSKHKMRQ--------GKTVRLN-INARERRRMHDLNDALDELRGVIPYAHSP 418
Q+PV K +++ R+ KTVR + NARERRRM+ LNDAL+ LRG++P P
Sbjct: 36 QKPVKREKRRYRCRKRSPATIERAKTVRRDKANARERRRMNSLNDALEHLRGILPAL--P 93
Query: 419 SVRKLSKIATLLLAKNYI 472
K++KI TL A+ YI
Sbjct: 94 DEPKMTKIETLRKAQEYI 111
>U10402-7|AAA19069.1| 192|Caenorhabditis elegans C. elegans neuro d
homolog protein1 protein.
Length = 192
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 269 RPVNESK-SKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIA 445
RP + S + ++ + K R+ N RER RMH LN+ALD LR IP + +KLSKI
Sbjct: 2 RPTDTSNFAPAEISKRKVRRVKANGRERARMHGLNNALDMLREYIPI--TTQHQKLSKIE 59
Query: 446 TLLLAKNYI 472
TL LA+NYI
Sbjct: 60 TLRLARNYI 68
>U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell
lineage protein 32 protein.
Length = 142
Score = 48.4 bits (110), Expect = 5e-06
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +2
Query: 236 NQPEPGTSYGQRPVNESKSKHKMRQGKTVRLN---INARERRRMHDLNDALDELRGVIPY 406
N P+ ++ G + + ++K + +R+ N RERRRM+ LN A DELR V+P
Sbjct: 42 NYPDSLSNGGGKDDKKKCRRYKTPSPQLLRMRRSAANERERRRMNTLNVAYDELREVLP- 100
Query: 407 AHSPSVRKLSKIATLLLAKNYIMMQASALEE 499
S +KLSK TL +A+ YI + L++
Sbjct: 101 -EIDSGKKLSKFETLQMAQKYIECLSQILKQ 130
>U41110-3|AAA82418.1| 170|Caenorhabditis elegans Helix loop helix
protein 10 protein.
Length = 170
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +2
Query: 230 DENQPEPGTSYGQRPVNESKSKHKMRQGK--TVRLNINARERRRMHDLNDALDELRGVIP 403
DEN+ P + R + + GK T R NARER R+ L+ D+LR +P
Sbjct: 58 DENESTPSPTQNSRRRTSTGKIDRRMVGKMCTRRYEANARERNRVQQLSKMFDQLRVCLP 117
Query: 404 YAHSPSVRKLSKIATLLLAKNYIMMQASALEE 499
K+SK+ATL +A +YI + L+E
Sbjct: 118 IEDD---AKISKLATLKVASSYIGYLGAILQE 146
>U15418-1|AAA67360.1| 71|Caenorhabditis elegans LIN-32 protein.
Length = 71
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +2
Query: 335 NARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEE 499
N RERRRM+ LN A DELR V+P S +KLSK TL +A+ YI + L++
Sbjct: 7 NERERRRMNTLNVAYDELREVLP--EIDSGKKLSKFETLQMAQKYIECLSQILKQ 59
>U40421-1|AAA81437.2| 178|Caenorhabditis elegans Helix loop helix
protein 8 protein.
Length = 178
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +2
Query: 335 NARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLV 514
N RER+R +LNDA LR +IP PS K+SKI TL +A +YI S L+E+++
Sbjct: 26 NRRERQRTKELNDAFTLLRKLIP--SMPS-DKMSKIHTLRIATDYI----SFLDEMQKNG 78
Query: 515 AYLQG 529
L G
Sbjct: 79 CKLYG 83
>AF037063-1|AAC26105.1| 178|Caenorhabditis elegans twist protein.
Length = 178
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +2
Query: 335 NARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLV 514
N RER+R +LNDA LR +IP PS K+SKI TL +A +YI S L+E+++
Sbjct: 26 NRRERQRTKELNDAFTLLRKLIP--SMPS-DKMSKIHTLRIATDYI----SFLDEMQKNG 78
Query: 515 AYLQG 529
L G
Sbjct: 79 CKLYG 83
>U58732-4|AAB00595.1| 147|Caenorhabditis elegans Helix loop helix
protein 13 protein.
Length = 147
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/68 (41%), Positives = 34/68 (50%)
Frame = +2
Query: 323 RLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEEL 502
R + RER+RM +N A ELR IP P ++LSKI TL LA YI M L
Sbjct: 43 RQTASIRERKRMCSINVAFIELRNYIP--TFPYEKRLSKIDTLNLAIAYINMLDDVLRTP 100
Query: 503 RRLVAYLQ 526
Y+Q
Sbjct: 101 EDSGQYIQ 108
>AF369899-1|AAK72958.1| 147|Caenorhabditis elegans Fer3-like
protein.
Length = 147
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/68 (41%), Positives = 34/68 (50%)
Frame = +2
Query: 323 RLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEEL 502
R + RER+RM +N A ELR IP P ++LSKI TL LA YI M L
Sbjct: 43 RQTASIRERKRMCSINVAFIELRNYIP--TFPYEKRLSKIDTLNLAIAYINMLDDVLRTP 100
Query: 503 RRLVAYLQ 526
Y+Q
Sbjct: 101 EDSGQYIQ 108
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 95 GVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPP 211
G+P E S P PG +GA+G G Y G+P PP
Sbjct: 211 GIPGEEGLSGPTGQPGSPGSIGAMGYEGAYGDRGEPGPP 249
>Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical
protein T15H9.3 protein.
Length = 268
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 335 NARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYI 472
N RER R+ ++ND + LR +P H +++SK+ TL LA YI
Sbjct: 179 NERERCRVRNVNDGYERLRKHLP-VHFDE-KRISKVDTLRLAIRYI 222
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 113 SHSPPQSVPGRRTPLGAVGLGGFYMQGG--QPPPPQHCYPTDENQPEP 250
++ PP G P G G GG+ G PPPP P E +P P
Sbjct: 67 NNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRP 114
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 92 DGVPLGESHSP-PQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYG 265
D P G+S P P PG P G G+GG Q G PP + N P PG+ G
Sbjct: 239 DPGPPGDSGIPGPPGPPGMAGPDGIPGMGGAKGQNGPDGPPGASGESGPNGP-PGSGGG 296
>U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop helix
protein 14 protein.
Length = 246
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 335 NARERRRMHDLNDALDELRGVI-PYAHSPSVRKLSKIATLLLAKNYI 472
N RER+R+H +N D LR + P H+ +K SK TL A YI
Sbjct: 108 NERERKRVHQVNHGFDVLRNRLQPKNHT---KKWSKADTLREAVKYI 151
>Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical
protein T05G5.2 protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.87
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 335 NARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLV 514
NARER R+H +N A L+ +P +++SK+ L A YI ++ V
Sbjct: 9 NARERTRVHTVNQAFLVLKQHLPSLRQ-FTKRVSKLRILNAAITYIDTLLKLIQS-SEAV 66
Query: 515 AYLQGTATAAGIVPPP 562
+AT IVP P
Sbjct: 67 PQSVISATLGPIVPTP 82
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 140 GRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKT 319
GR+ + + LG ++ PPP+ +EN P P S G+ + E K +HK+ Q T
Sbjct: 549 GRKLTINTL-LGNADVKATFYPPPKASMSNEENGPGPSGS-GE-SMKERKPEHKILQVNT 605
Query: 320 ----VRLNINARERRRMHDLNDALDELR 391
+ L +N R +DEL+
Sbjct: 606 HQMIILLQLNHHNRISCQHEQQLMDELK 633
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +2
Query: 101 PLGESHSPPQSVPGRRTPLGAVGLG-----GFYMQGGQPPPPQHCYPT 229
P G PP P R P G G+ G GG PPPP YP+
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 357
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +2
Query: 101 PLGESHSPPQSVPGRRTPLGAVGLG-----GFYMQGGQPPPPQHCYPT 229
P G PP P R P G G+ G GG PPPP YP+
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 367
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 215 HCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKTV-RLNINARERR 352
HC P P + Y + +S +MRQ KT LN+N E R
Sbjct: 279 HCSRVPSKPPRPASYYRRDDSEDSDCLRQMRQRKTASSLNVNNYEHR 325
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 122 PPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRP 274
PP G++ LG G G GQP PPQ P + Q G GQ+P
Sbjct: 20 PPSGPGGQQNGLGPQG--GTTAASGQPQPPQPGQPGGQ-QTGSGPGAGQQP 67
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 227 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 282
Query: 458 AKNYI 472
+ +YI
Sbjct: 283 SCDYI 287
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 90 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 145
Query: 458 AKNYI 472
+ +YI
Sbjct: 146 SCDYI 150
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 227 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 282
Query: 458 AKNYI 472
+ +YI
Sbjct: 283 SCDYI 287
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 202 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 257
Query: 458 AKNYI 472
+ +YI
Sbjct: 258 SCDYI 262
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 193 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 248
Query: 458 AKNYI 472
+ +YI
Sbjct: 249 SCDYI 253
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 168 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 223
Query: 458 AKNYI 472
+ +YI
Sbjct: 224 SCDYI 228
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 253 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 308
Query: 458 AKNYI 472
+ +YI
Sbjct: 309 SCDYI 313
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 278 NESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLL 457
N+ + ++ R+ K + N ERRR +++ND + EL ++P S + KL+K L
Sbjct: 228 NDPEDYYRDRRKKDIH---NMIERRRRYNINDRIKELGQMLPKNTSEDM-KLNKGTILKA 283
Query: 458 AKNYI 472
+ +YI
Sbjct: 284 SCDYI 288
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIP 403
P P +S + NES S K ++ NARER R+ D+N A EL +
Sbjct: 274 PPSSGIPTRHSSSSRLSDNESMSDDKDTDRRSQN---NARERVRVRDINSAFKELGRMCT 330
Query: 404 YAHSPSVRKLSKIATLLLAKNYI 472
+ + R +K+ L A + I
Sbjct: 331 QHNQNTERNQTKLGILYNAVSVI 353
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIP 403
P P +S + NES S K ++ NARER R+ D+N A EL +
Sbjct: 274 PPSSGIPTRHSSSSRLSDNESMSDDKDTDRRSQN---NARERVRVRDINSAFKELGRMCT 330
Query: 404 YAHSPSVRKLSKIATLLLAKNYI 472
+ + R +K+ L A + I
Sbjct: 331 QHNQNTERNQTKLGILYNAVSVI 353
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 101 PLGESHSPPQS-VPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPV 277
P+G P + PG P GA G+ G GQP P + QP P +Y P
Sbjct: 215 PVGSDGQPGSAGAPGAPGPAGAPGVDGQPGANGQPGPDGE--QGHDGQPGPDAAYCPCPA 272
Query: 278 NES 286
S
Sbjct: 273 RSS 275
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +2
Query: 140 GRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKT 319
GR+ + + LG ++ PPP+ +EN P P +S G+ + E K +HK+ Q T
Sbjct: 549 GRKLTINTL-LGNADVKATFYPPPKASMSNEENGPGPSSS-GE-SMKERKPEHKILQVNT 605
Query: 320 ----VRLNINARERRRMHDLNDAL 379
+ L N R L D L
Sbjct: 606 HQMIILLQFNHHNRISCQQLMDEL 629
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 395 VIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELR 505
++P H+P R L IAT LLA N M ++ +EL+
Sbjct: 138 ILPRIHTPPARNLQAIATRLLAMN--MCGPTSFDELK 172
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIP 403
P P +S + NES S K ++ NARER R+ D+N A EL +
Sbjct: 274 PPSSGIPTRHSSSSRLSDNESMSDDKDTDRRSQN---NARERVRVRDINSAFKELGRMCT 330
Query: 404 YAHSPSVRKLSKIATL 451
+ + R +K+ L
Sbjct: 331 QHNQNTERNQTKLGIL 346
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIP 403
P P +S + NES S K ++ NARER R+ D+N A EL +
Sbjct: 274 PPSSGIPTRHSSSSRLSDNESMSDDKDTDRRSQN---NARERVRVRDINSAFKELGRMCT 330
Query: 404 YAHSPSVRKLSKIATL 451
+ + R +K+ L
Sbjct: 331 QHNQNTERNQTKLGIL 346
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIP 403
PT + G + + K K + K V + E R ++ LD +
Sbjct: 915 PTPTTTTDGGAAAASTTTENKEEKRKSNKRKVVMEILGCDESRNFALVSCRLDTSHKSVT 974
Query: 404 YAHSPSVRKLSKIATLLLAKNYIM 475
+ +P K IAT LLA++ ++
Sbjct: 975 FQFAPGTDKPCTIATKLLAEDCLL 998
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +2
Query: 224 PTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIP 403
PT + G + + K K + K V + E R ++ LD +
Sbjct: 915 PTPTTTTDGGAAAASTTTENKEEKRKSNKRKVVMEILGCDESRNFALVSCRLDTSHKSVT 974
Query: 404 YAHSPSVRKLSKIATLLLAKNYIM 475
+ +P K IAT LLA++ ++
Sbjct: 975 FQFAPGTDKPCTIATKLLAEDCLL 998
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +2
Query: 71 MEGRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEP 250
+ G + DG P + G R G GL G G+P P C+ P P
Sbjct: 222 LSGGKGHDGKPGLGGQPGVRGAVGARGDAGNPGLPGPQGPKGEPGNPGTCHHCQNRAPAP 281
Query: 251 GTSYGQRP 274
+ G+ P
Sbjct: 282 SEAPGKAP 289
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +2
Query: 77 GRRNWDGVP----LGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQP 244
GR DG P G +P PG + P GA G G GQP H Y P
Sbjct: 164 GRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAP 223
Query: 245 EPGTSYG 265
P G
Sbjct: 224 GPAGPRG 230
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 188 QGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQG 313
Q Q PPP + + N +PG Q P + S M+QG
Sbjct: 2737 QYSQQPPPSYQQSSYPNNYQPGQQGNQPPNYQQPSHQSMQQG 2778
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 77 GRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPP 211
G+ DG P ++ PG + P G G+ G Q G+P PP
Sbjct: 213 GQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPP 257
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/114 (21%), Positives = 44/114 (38%)
Frame = +2
Query: 119 SPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKH 298
+P + P +R+ + + G G + + +P+ + G+ N S S
Sbjct: 422 TPKEIKPEKRSSVSSQGTIGAEKTKAKKKNKDEAVSSMFKRPDQFSENGEASGNNSDSTM 481
Query: 299 KMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLA 460
+ R + A R + +D L+ + +H P R SK+A LLA
Sbjct: 482 ASGRPDFERGHARASYREYKKTYKEIIDRLKMMRTDSHRPDFRPASKLANPLLA 535
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/114 (21%), Positives = 44/114 (38%)
Frame = +2
Query: 119 SPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKH 298
+P + P +R+ + + G G + + +P+ + G+ N S S
Sbjct: 422 TPKEIKPEKRSSVSSQGTIGAEKTKAKKKNKDEAVSSMFKRPDQFSENGEASGNNSDSTM 481
Query: 299 KMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLA 460
+ R + A R + +D L+ + +H P R SK+A LLA
Sbjct: 482 ASGRPDFERGHARASYREYKKTYKEIIDRLKMMRTDSHRPDFRPASKLANPLLA 535
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/114 (21%), Positives = 44/114 (38%)
Frame = +2
Query: 119 SPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKH 298
+P + P +R+ + + G G + + +P+ + G+ N S S
Sbjct: 422 TPKEIKPEKRSSVSSQGTIGAEKTKAKKKNKDEAVSSMFKRPDQFSENGEASGNNSDSTM 481
Query: 299 KMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLA 460
+ R + A R + +D L+ + +H P R SK+A LLA
Sbjct: 482 ASGRPDFERGHARASYREYKKTYKEIIDRLKMMRTDSHRPDFRPASKLANPLLA 535
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 77 GRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPP 211
G+ DG P ++ PG + P G G+ G Q G+P PP
Sbjct: 194 GQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPP 238
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 28.7 bits (61), Expect = 4.7
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Frame = +2
Query: 182 YMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMH 361
+ Q P PQ T +N + ++ K+ K + +N++ + M
Sbjct: 72 HFQSPSPMAPQGPPGTPQNSAAAAAA-----ASDDKNVTKCVRFLKTLINLSNNDDPEMP 126
Query: 362 DLNDALDEL-RGVIPYAHSPS---VRKLSKIATLLLAKNYIMMQASALEELRRLVAYLQG 529
D + EL RGVI Y + + R L ++ + + + L LR V G
Sbjct: 127 DKAARVKELIRGVI-YLETTAEEFTRNLQQVLKSQAQPHLLPFLQNTLPALRNAVR--NG 183
Query: 530 TATAAGIVPPPGF 568
TA+ G+ PPPG+
Sbjct: 184 TASVEGVNPPPGY 196
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 119 SPPQSVPGRRTP-LGAVGLGGFYMQGGQPPP---PQHCYPTDENQPEPGTS 259
+P Q+ P R+ P + AV Q Q PP PQ P +N P+P S
Sbjct: 370 TPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPS 420
>Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical
protein ZK678.5 protein.
Length = 557
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +2
Query: 122 PPQSVPGRRTPLGAVGLGGFYMQGGQPP--PPQHCYPTDENQPEPGTSYGQRPVNESKS 292
PP G P G GGF QG QP PQ P P P G P+ + S
Sbjct: 281 PPGQQGGFVQPQGFQPQGGFQPQGFQPQGFQPQAFQPQVVQNPVPAAPAGYAPMGFAPS 339
>U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical
protein F45F2.10 protein.
Length = 980
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 576 PVFQRQPSSFSLQPRAPR 629
P F+ P+SF+L+PR PR
Sbjct: 859 PAFESSPNSFNLRPRDPR 876
>U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein.
Length = 557
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +2
Query: 122 PPQSVPGRRTPLGAVGLGGFYMQGGQPP--PPQHCYPTDENQPEPGTSYGQRPVNESKS 292
PP G P G GGF QG QP PQ P P P G P+ + S
Sbjct: 281 PPGQQGGFVQPQGFQPQGGFQPQGFQPQGFQPQAFQPQVVQNPVPAAPAGYAPMGFAPS 339
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 77 GRRNWDGVP--LGESHSP-PQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQP- 244
GR DG P G S P P PG+ G G G + GG PP P P
Sbjct: 164 GRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRPGAPG 223
Query: 245 EPG 253
+PG
Sbjct: 224 QPG 226
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 77 GRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGT 256
G+R DG P ++ Q PG + P G G G G+P P P + PGT
Sbjct: 156 GQRGSDGQPGQDAMGGGQGAPGPQGPAGDNGQPGRPGNDGRPGAPG--APGTRSVGRPGT 213
Query: 257 SYGQRP 274
+ P
Sbjct: 214 AGSPGP 219
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 74 EGRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQP-EP 250
EG R DGVP +PG P GA G GF + G+P P + QP EP
Sbjct: 724 EGSRGLDGVPGYPGEHGTDGLPG--LP-GADGQPGFVGEAGEPGTPGY-----RGQPGEP 775
Query: 251 GT-SYGQRP 274
G +Y +P
Sbjct: 776 GNLAYPGQP 784
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 74 EGRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQP-EP 250
EG R DGVP +PG P GA G GF + G+P P + QP EP
Sbjct: 981 EGSRGLDGVPGYPGEHGTDGLPG--LP-GADGQPGFVGEAGEPGTPGY-----RGQPGEP 1032
Query: 251 GT-SYGQRP 274
G +Y +P
Sbjct: 1033 GNLAYPGQP 1041
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 74 EGRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQP-EP 250
EG R DGVP +PG P GA G GF + G+P P + QP EP
Sbjct: 980 EGSRGLDGVPGYPGEHGTDGLPG--LP-GADGQPGFVGEAGEPGTPGY-----RGQPGEP 1031
Query: 251 GT-SYGQRP 274
G +Y +P
Sbjct: 1032 GNLAYPGQP 1040
>U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical
protein C37A2.8a protein.
Length = 336
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 194 GQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQ 310
G+ P P+H Y E Q GTS+ + +NE+K K ++ +
Sbjct: 185 GRAPIPEH-YHHSEEQRVYGTSHMRLSLNENKRKEEIEK 222
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 326 LNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELR 505
L+++A + RR L D D+L +IP +S V+ + + A + +QA ++ +
Sbjct: 807 LHLHAEQNRRSA-LKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQ 865
Query: 506 RL 511
++
Sbjct: 866 KI 867
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 326 LNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELR 505
L+++A + RR L D D+L +IP +S V+ + + A + +QA ++ +
Sbjct: 807 LHLHAEQNRRSA-LKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQ 865
Query: 506 RL 511
++
Sbjct: 866 KI 867
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 95 GVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRP 274
G P H PG P G G G Q G P P + N PG + Q P
Sbjct: 176 GAPGQPGHGGGSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAGPQGP 235
Query: 275 VNES 286
S
Sbjct: 236 PGPS 239
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 609 LQPRAPRRPQNHPLEIHS*NLNRKPSRI*SLXNKR 713
++P++P+ PQN E+ +N PS + L NK+
Sbjct: 264 VEPQSPKSPQNMKEELLRLLVNMSPSEVERLKNKK 298
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 326 LNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELR 505
L+++A + RR L D D+L +IP +S V+ + + A + +QA ++ +
Sbjct: 807 LHLHAEQNRRSA-LKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQ 865
Query: 506 RL 511
++
Sbjct: 866 KI 867
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 326 LNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELR 505
L+++A + RR L D D+L +IP +S V+ + + A + +QA ++ +
Sbjct: 711 LHLHAEQNRRSA-LKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQ 769
Query: 506 RL 511
++
Sbjct: 770 KI 771
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,755,223
Number of Sequences: 27780
Number of extensions: 366233
Number of successful extensions: 1667
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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