Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1765
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   1.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   1.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   1.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   5.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   7.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   7.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.5  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 108 AKNMVISVIGWLWSLQSGSTNKTKP 34
           A  + I     LW L SG  N T+P
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQP 148


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 108 AKNMVISVIGWLWSLQSGSTNKTKP 34
           A  + I     LW L SG  N T+P
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQP 148


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 108 AKNMVISVIGWLWSLQSGSTNKTKP 34
           A  + I     LW L SG  N T+P
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQP 148


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 75  LWSLQSGSTNKTKP 34
           LW L SG  N T+P
Sbjct: 140 LWVLDSGLVNNTQP 153


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 108 AKNMVISVIGWLWSLQSGSTNKTKP 34
           A  + I     LW L SG  N T+P
Sbjct: 128 AYKIAIDKFDRLWILDSGIINNTQP 152


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 75  LWSLQSGSTNKTKP 34
           LW L SG  N+T P
Sbjct: 136 LWVLDSGLVNRTVP 149


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 310 LFYLLALLEPDLPF 351
           LFYLL  L  DLP+
Sbjct: 123 LFYLLVSLRIDLPW 136


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 310 LFYLLALLEPDLPF 351
           LFYLL  L  DLP+
Sbjct: 176 LFYLLVSLRIDLPW 189


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 277 ISLLRTSRRGQLFYLL 324
           I ++   RRG+LFY +
Sbjct: 222 IRIVNKDRRGELFYYM 237


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 309 VILFVGAIGTGSAFSLASTTIGALFYQYY 395
           V++ + A+G G+  +       A+FYQ Y
Sbjct: 6   VVVLLLAVGLGAGQNNKGWWKNAIFYQVY 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,069
Number of Sequences: 438
Number of extensions: 2732
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)