Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1764
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   2.5  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    22   4.3  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    22   5.7  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    21   7.6  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 114 TILPVVSTVRPSRSKIRGAGPDPGVDDKAPPAS 16
           ++ P  STV P  +     G +PG     PP S
Sbjct: 412 SVAPTTSTVAPGTTTTTPTGANPGTTQ--PPTS 442


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 34  IIDAGVGTCPPD 69
           +++ G+G CPP+
Sbjct: 137 LMEVGIGNCPPE 148


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 134 PTLQANIRAKRREEFKAQLSGPTEEVG 214
           PT+Q ++RA+R+   ++  S   +E G
Sbjct: 213 PTVQQSVRAQRQGVTESASSAVPDEAG 239


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 85  SHRGHHGQDSSTHPRGAHASGEH 153
           +H  HH      HP  A  +G H
Sbjct: 500 AHPHHHHHHHHHHPTAADLAGYH 522


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,270
Number of Sequences: 2352
Number of extensions: 5372
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)