Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1764
(300 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 2.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 2.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 2.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 3.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 4.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.3
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 20 5.7
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 20 7.6
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 20 7.6
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 20 7.6
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 2.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 64 PDLGP*GSHRGHHGQDSSTHPRGAHASGEHKSE 162
PD P + HH Q + HP G+H+S+
Sbjct: 158 PDSPPLVESQMHH-QMHTQHPHMQPQQGQHQSQ 189
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 2.5
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 223 RLRTHLLSGTGQLSFELLTSLRSYVRLKRG 134
++ TH ++G+ Q F +T + KRG
Sbjct: 1571 KVETHNVAGSNQAEFTFVTLTKEGELSKRG 1600
Score = 21.0 bits (42), Expect = 3.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 32 LSSTPGSGPAPLILDREGRTVDTTGRIVQL 121
+S+ P +GP + ++GR + TGR +L
Sbjct: 354 VSTHPQAGPHFITWYKDGRQLPGTGRQSEL 383
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 2.5
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 223 RLRTHLLSGTGQLSFELLTSLRSYVRLKRG 134
++ TH ++G+ Q F +T + KRG
Sbjct: 1567 KVETHNVAGSNQAEFTFVTLTKEGELSKRG 1596
Score = 21.0 bits (42), Expect = 3.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 32 LSSTPGSGPAPLILDREGRTVDTTGRIVQL 121
+S+ P +GP + ++GR + TGR +L
Sbjct: 354 VSTHPQAGPHFITWYKDGRQLPGTGRQSEL 383
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 3.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 89 CDPHGPRSGGQVPT 48
C P PR G VPT
Sbjct: 394 CTPSPPRGPGGVPT 407
Score = 20.6 bits (41), Expect = 4.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 29 ALSSTPGSGPAP 64
A +STPGSG P
Sbjct: 231 ATTSTPGSGSLP 242
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.6 bits (41), Expect = 4.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 127 VGELNYPARGVHGATLTVQ 71
+ E NYP +HG L Q
Sbjct: 471 LSENNYPTTSIHGDRLQRQ 489
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 4.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 86 RTVDTTGRIVQLTHVAP 136
+ +D +GR VQL+ AP
Sbjct: 883 KVLDKSGRSVQLSWAAP 899
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +2
Query: 20 AGGALSSTPGSGPAPLILDREGRTVDTTGRIVQL 121
AG L+ + P PL+ +DT +I+++
Sbjct: 21 AGQVLAGSSSPRPKPLLKKEYPLVMDTKLKIIEI 54
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -2
Query: 137 WAPRG*VELSCPWCPRCDP 81
W P + + P+CP C P
Sbjct: 340 WLPFFLMYVIVPFCPDCCP 358
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -2
Query: 137 WAPRG*VELSCPWCPRCDP 81
W P + + P+CP C P
Sbjct: 340 WLPFFLMYVIVPFCPDCCP 358
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -2
Query: 137 WAPRG*VELSCPWCPRCDP 81
W P + + P+CP C P
Sbjct: 340 WLPFFLMYVIVPFCPDCCP 358
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,356
Number of Sequences: 438
Number of extensions: 1642
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6244050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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