Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1759
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    29   0.17 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.51 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   1.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.6  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   4.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.8  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   6.3  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +1

Query: 475 APIVIVSVYLPP-------DKIVLSSDIEALLGMGSSVILAGDLNCKHIRWELTHHN 624
           A I  +SVY PP       ++++ + ++EA     S V++AGD N  H  W    +N
Sbjct: 83  AGIDFISVYAPPSLSPQEYERLLEAVELEA--SSHSHVVIAGDFNAWHTEWGSRRNN 137


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +1

Query: 487 IVSVYLPPDKIV-----LSSDIEALLGMGSSVILAGDLNCKHIRW 606
           IVS Y+ P   V     +   I+ ++   S V+LAGD N  H+ W
Sbjct: 86  IVSCYVSPQTGVPEFRSIMEKIDLIVRGCSRVLLAGDFNAMHLDW 130


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 559 SSVILAGDLNCKHIRW 606
           S V++AGD N  H+ W
Sbjct: 117 SQVVIAGDFNAWHVEW 132


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +1

Query: 481 IVIVSVYLPPDKIV-----LSSDIEALLGMGSSVILAGDLNCKHIRWELTHHNPE 630
           I IV  Y+ P+  V     +   I+ L+     V+LAGD N  H  W      P+
Sbjct: 83  ITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAGDFNAWHTAWGSERTKPK 137


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 641 AACHSGLWCVSSHLMCLQF 585
           +A  S  WC++SH  C++F
Sbjct: 265 SAMGSIAWCMASHYRCVRF 283



 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +2

Query: 200 LTLTVSQINVIRFLTFCVTIKLIYF*CRRPYLSPRAVTLKSRTITWSGT 346
           + L+   + V++ L+    +  I +     Y   R   L  R I WSGT
Sbjct: 248 IVLSTGPVTVLQMLSIVSAMGSIAWCMASHYRCVRFARLDKRHIPWSGT 296


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 593 NTSGGNSHTTTPNGRRLDALVDDLAFDIVAXLTPTHYPLNIAHRPGILDIA 745
           +T+ G+  T    G  +  LVD L  +++   T   +  N   RP ++D+A
Sbjct: 126 HTAWGSCRTNA-KGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVA 175


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 540 LDITA*NDLIRWKINGHDNDRRVSR 466
           LD+   N    W +  HDN R  SR
Sbjct: 343 LDVVPENRFSNWVLGNHDNKRVSSR 367


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,650
Number of Sequences: 2352
Number of extensions: 16150
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)