Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1759
(800 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 71 2e-12
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 71 2e-12
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 64 3e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 61 2e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 54 2e-07
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 54 3e-07
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 54 3e-07
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 54 3e-07
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 49 9e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 48 1e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 48 2e-05
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 48 2e-05
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 46 5e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.005
BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p pro... 32 0.79
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 32 1.0
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 31 1.8
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 1.8
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny... 29 7.4
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA... 29 7.4
AY113488-1|AAM29493.1| 435|Drosophila melanogaster RE47056p pro... 29 9.8
AY071121-1|AAL48743.1| 119|Drosophila melanogaster RE17113p pro... 29 9.8
AE014296-1399|AAN12016.1| 119|Drosophila melanogaster CG13679-P... 29 9.8
AE014296-1398|AAF50465.1| 145|Drosophila melanogaster CG13679-P... 29 9.8
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 70.9 bits (166), Expect = 2e-12
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRD--PKIANYNMVRNDRL 354
++ IG +NA GL +++ FL DH ID+ L ET ++ +R P Y+ +
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRIYLPGYLMYH-AHHPSG 63
Query: 355 SARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIVSVYLPPDKIVLSS 531
++RGG VI R H PL P ++ + + R+ L T + + +VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 532 DIEALL-GMGSSVILAGDLNCKHIRW 606
D +++ +G+ I GD N KH W
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWW 146
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 70.9 bits (166), Expect = 2e-12
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRD--PKIANYNMVRNDRL 354
++ IG +NA GL +++ FL DH ID+ L ET ++ +R P Y+ +
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRIYLPGYLMYH-AHHPSG 63
Query: 355 SARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIVSVYLPPDKIVLSS 531
++RGG VI R H PL P ++ + + R+ L T + + +VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 532 DIEALL-GMGSSVILAGDLNCKHIRW 606
D +++ +G+ I GD N KH W
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWW 146
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 63.7 bits (148), Expect = 3e-10
Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
Frame = +1
Query: 175 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMVRNDR 351
PL + + +NA G++ + +V F+R H+ID+ L+ ET K A PK+ + ND
Sbjct: 3 PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGA-ETPKLFGFVAYTANDP 59
Query: 352 LSARG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLS 528
GG I + +L PL P A A ++ + I T PI +VY PP +
Sbjct: 60 SGGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTT 118
Query: 529 SDIEALL-GMGSSVILAGDLNCKHIRWELTHHNPEWQAAXXXXXXXXXXXXXXXNPDSLP 705
+ + +L + I+AGD N H W N A P P
Sbjct: 119 DEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYP 178
Query: 706 AKYRASPG 729
R SPG
Sbjct: 179 YGCRGSPG 186
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 60.9 bits (141), Expect = 2e-09
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 360
++ I +NA G++ ++ +++ FL + ID+ L+ ET L ++ + +I +Y+ +
Sbjct: 3 TLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLT-SKYNFQIRDYHFYGTNHPDG 61
Query: 361 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLSSD- 534
+ GGT I R + A +++A+ I L + + + +VY PP VL +
Sbjct: 62 KAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQF 121
Query: 535 IEALLGMGSSVILAGDLNCKHIRWELTHHNPE 630
++ +G I AGD N KH W NP+
Sbjct: 122 LDFFQALGPHFIAAGDYNAKHTHWGSRLVNPK 153
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 54.0 bits (124), Expect = 2e-07
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Frame = +1
Query: 178 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRD---PK-IANYNMVRN 345
+++TI +N +G+ N ++++ ++DH DI +QET L + PK + Y +
Sbjct: 1 MTITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFS 60
Query: 346 DRLSARGGGTVIYYRRALHCVPLDPPALANIEASV-C-RISLTGHAPIVIVSVYLPPDKI 519
SA+ G V+ R P NI +S+ C + L I IV+ Y+PP +I
Sbjct: 61 YNTSAKQGIGVLIKRNV-------PHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQI 113
Query: 520 VLSSDI-EALLGMGSSVILAGDLNCKHIRW 606
SSDI E L + S IL GDLN W
Sbjct: 114 FSSSDISEILQNLNGSTILLGDLNSWSPLW 143
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 354
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 355 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIVSVY--LP 507
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 508 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRW 606
L + E LL S IL GD NCKH W
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLW 165
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 354
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 355 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIVSVY--LP 507
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 508 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRW 606
L + E LL S IL GD NCKH W
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLW 165
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 354
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 355 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIVSVY--LP 507
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 508 PDKIVLSSDIEALLGMGSSVILAGDLNCKHIRW 606
L + E LL S IL GD NCKH W
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLW 165
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 48.8 bits (111), Expect = 9e-06
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 360
++ I +NA + N+R ++ FL ++ I I L+ ET L + R I Y + RNDR +
Sbjct: 11 NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69
Query: 361 RGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVY--------LPPD- 513
RGGG I L + IE +I+ ++ + I S+Y +P
Sbjct: 70 RGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPSSC 129
Query: 514 ---------KIVLSSDIEALLGMGSSVILAGDLNCKHIRWELTHHN 624
K + SD+ + + + ++ GD N +H W+ T N
Sbjct: 130 DLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRAN 175
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 48.4 bits (110), Expect = 1e-05
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Frame = +1
Query: 190 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 363
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSSKR 71
Query: 364 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLS--- 528
GG I H P++ + + + + IVI SVY PP L
Sbjct: 72 GGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPHHF 131
Query: 529 SDI----EALLGMGSSVILAGDLNCKHIRWELT 615
+D+ E LG + IL GD N KH +W T
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCT 164
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 47.6 bits (108), Expect = 2e-05
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 360
S+ I +NA G++ +++ F+ + ID+ L+ ET L + + I Y +
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTN-KNNFHIPGYLFYGTNHPDG 61
Query: 361 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLSSD- 534
+ GGT I R + L+ ++++ + L + + +VY PP + +S D
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQ 119
Query: 535 -IEALLGMGSSVILAGDLNCKHIRW 606
+E +G I AGD N KH W
Sbjct: 120 FMEFFNTLGDRFIAAGDYNAKHTHW 144
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 47.6 bits (108), Expect = 2e-05
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Frame = +1
Query: 181 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 360
S+ I +NA G++ +++ F+ + ID+ L+ ET L + + I Y +
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTN-KNNFHIPGYLFYGTNHPDG 61
Query: 361 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLSSD- 534
+ GGT I R + L+ ++++ + L + + +VY PP + +S D
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQ 119
Query: 535 -IEALLGMGSSVILAGDLNCKHIRW 606
+E +G I AGD N KH W
Sbjct: 120 FMEFFNTLGDRFIAAGDYNAKHTHW 144
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 46.4 bits (105), Expect = 5e-05
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Frame = +1
Query: 190 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 363
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 24 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKR 83
Query: 364 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLS--- 528
GG I H P++ + + + + IVI SVY PP
Sbjct: 84 GGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 143
Query: 529 SDI----EALLGMGSSVILAGDLNCKHIRW 606
+D+ E +G + +IL GD N KH +W
Sbjct: 144 TDVLNFAEKTMGGQTKLILCGDWNAKHRQW 173
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.4 bits (105), Expect = 5e-05
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Frame = +1
Query: 190 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 363
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 364 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLS--- 528
GG I H P++ + + + + IVI SVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 529 SDI----EALLGMGSSVILAGDLNCKHIRWELT 615
+D+ E LG + IL GD N KH +W T
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCT 164
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.4 bits (105), Expect = 5e-05
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Frame = +1
Query: 190 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 363
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 364 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLS--- 528
GG I H P++ + + + + IVI SVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 529 SDI----EALLGMGSSVILAGDLNCKHIRWELT 615
+D+ E LG + IL GD N KH +W T
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCT 164
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.4 bits (105), Expect = 5e-05
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Frame = +1
Query: 190 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 363
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 364 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLS--- 528
GG I H P++ + + + + IVI SVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 529 SDI----EALLGMGSSVILAGDLNCKHIRWELT 615
+D+ E LG + IL GD N KH +W T
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCT 164
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +1
Query: 178 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS 357
+S+TI +N G N + ++ + I +QET ++ P NY ++ N +
Sbjct: 1 MSLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATN 60
Query: 358 ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVYLPPDKIVLSSDI 537
GG ++ ++ H V I+ I++ + I S Y+ P K + + +
Sbjct: 61 RFGGVRLLVHKSIQHTV-----LNITIDIEAIAINIESKLKLNIFSTYISPTKNITNQTL 115
Query: 538 EALLGMGSS-VILAGDLNCKHIRW 606
+ + ++ GD N H W
Sbjct: 116 HNTFNIQQTPSLITGDFNGWHHPW 139
>BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p
protein.
Length = 85
Score = 32.3 bits (70), Expect = 0.79
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +1
Query: 328 YNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSVYLP 507
Y M R DR S RGGG +I R L L N E ++S + + + I Y+P
Sbjct: 2 YTMYRYDRPSRRGGGVLIAVRSTLASEELLFDESRNSEFLCVKLSFSDRS-VYITCSYIP 60
Query: 508 P 510
P
Sbjct: 61 P 61
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 31.9 bits (69), Expect = 1.0
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Frame = +1
Query: 319 IANYNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIVSV 498
I Y + RNDR +RGGG I L + IE +I+ ++ + I S+
Sbjct: 4 IPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSI 63
Query: 499 Y--------LPPD----------KIVLSSDIEALLGMGSSVILAGDLNCKHIRWELTHHN 624
Y +P K + SD+ + + + ++ GD N +H W+ T N
Sbjct: 64 YFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRAN 123
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 623 TPNGRRLDALVDDLAFDIVAXLTPTHYPLNIAHRPGILDIALF 751
+P GR L + I+A +PT YP +H P +D A++
Sbjct: 152 SPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAVY 194
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 31.1 bits (67), Expect = 1.8
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Frame = +1
Query: 274 LVQETLLKPARRDPKIANY--NMVRNDRLSARGGGTVIYYRRALHCV--PLDPPALANIE 441
+V ET L ++ Y + +N S RGG I H P++ + +
Sbjct: 2 IVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGVATIVNSSIRHMALEPIEKECIQSAP 61
Query: 442 ASVCRISLTGHAPIVIVSVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHI 600
+ + IVI SVY PP +D+ E LG + IL GD N KH
Sbjct: 62 IVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHR 121
Query: 601 RWELT 615
+W T
Sbjct: 122 QWGCT 126
>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
cyclase protein.
Length = 2248
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +1
Query: 217 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRN-----DRLSARGGGTVI 381
A D+ S +LRDH +D F + + P RR P + N VR+ +LS R V+
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVV 484
Query: 382 YYRRALHCVPLDPP 423
+ LH + P
Sbjct: 485 --MQLLHTIKFSEP 496
>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
protein.
Length = 2248
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +1
Query: 217 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRN-----DRLSARGGGTVI 381
A D+ S +LRDH +D F + + P RR P + N VR+ +LS R V+
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVV 484
Query: 382 YYRRALHCVPLDPP 423
+ LH + P
Sbjct: 485 --MQLLHTIKFSEP 496
>AY113488-1|AAM29493.1| 435|Drosophila melanogaster RE47056p
protein.
Length = 435
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 593 NTSGGNSHTTTPNGRRLDALVDDLAFDIVAXLTPTHYPLNI 715
NT GGN PNG + A VDD D + + H P N+
Sbjct: 209 NTLGGNVDKHRPNGNSIKANVDD--NDSIGKNSLYHEPFNV 247
>AY071121-1|AAL48743.1| 119|Drosophila melanogaster RE17113p
protein.
Length = 119
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 ARP*ALKNPIVTDRGFILLIYAIDYR-RSEGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 42
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 27 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86
Query: 41 ASPKA 27
A+P A
Sbjct: 87 AAPIA 91
>AE014296-1399|AAN12016.1| 119|Drosophila melanogaster CG13679-PB,
isoform B protein.
Length = 119
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 ARP*ALKNPIVTDRGFILLIYAIDYR-RSEGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 42
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 27 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86
Query: 41 ASPKA 27
A+P A
Sbjct: 87 AAPIA 91
>AE014296-1398|AAF50465.1| 145|Drosophila melanogaster CG13679-PA,
isoform A protein.
Length = 145
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 ARP*ALKNPIVTDRGFILLIYAIDYR-RSEGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 42
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 53 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 112
Query: 41 ASPKA 27
A+P A
Sbjct: 113 AAPIA 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,527,527
Number of Sequences: 53049
Number of extensions: 725382
Number of successful extensions: 1531
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -