Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1757
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041761-1|AAH41761.2| 792|Homo sapiens DOCK5 protein protein. 32 1.0
AK126249-1|BAC86503.1| 942|Homo sapiens protein ( Homo sapiens ... 32 1.0
AK024687-1|BAB14962.1| 274|Homo sapiens protein ( Homo sapiens ... 32 1.0
AY129022-1|AAM98765.1| 303|Homo sapiens unknown protein. 29 5.5
L10333-1|AAA59950.1| 776|Homo sapiens nueroendocrine-specific p... 29 7.3
BC111694-1|AAI11695.1| 702|Homo sapiens RTN1 protein protein. 29 7.3
BC090862-1|AAH90862.1| 776|Homo sapiens reticulon 1 protein. 29 7.3
BC075801-1|AAH75801.1| 812|Homo sapiens PARP8 protein protein. 29 7.3
BC037386-1|AAH37386.1| 494|Homo sapiens PARP8 protein protein. 29 7.3
BC029558-1|AAH29558.1| 145|Homo sapiens zinc finger, AN1-type d... 29 7.3
AL589739-1|CAI22504.1| 497|Homo sapiens novel protein protein. 29 7.3
AL513477-6|CAI22608.1| 497|Homo sapiens novel protein protein. 29 7.3
AK024961-1|BAB15044.1| 501|Homo sapiens protein ( Homo sapiens ... 29 7.3
AK024003-1|BAB14768.1| 497|Homo sapiens protein ( Homo sapiens ... 29 7.3
D88827-1|BAA21853.1| 683|Homo sapiens zinc finger protein FPM31... 29 9.7
BC008805-1|AAH08805.1| 683|Homo sapiens zinc finger protein 263... 29 9.7
AC004232-1|AAC24490.1| 683|Homo sapiens FPM315 protein. 29 9.7
>BC041761-1|AAH41761.2| 792|Homo sapiens DOCK5 protein protein.
Length = 792
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 420 TASXKLQSAVSEHQSPTRXGXDGSVTPP-LSSAEPSGARPSARTTASEASEGR 265
T+S S+ S +P+R G DGS+ P L SGAR + E SE R
Sbjct: 598 TSSVVSTSSNSSDNAPSRPGSDGSILEPLLERRASSGARVEDLSLREENSENR 650
>AK126249-1|BAC86503.1| 942|Homo sapiens protein ( Homo sapiens
cDNA FLJ44261 fis, clone TLIVE2001327, moderately
similar to Human DOCK180 protein mRNA. ).
Length = 942
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 420 TASXKLQSAVSEHQSPTRXGXDGSVTPP-LSSAEPSGARPSARTTASEASEGR 265
T+S S+ S +P+R G DGS+ P L SGAR + E SE R
Sbjct: 748 TSSVVSTSSNSSDNAPSRPGSDGSILEPLLERRASSGARVEDLSLREENSENR 800
>AK024687-1|BAB14962.1| 274|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21034 fis, clone CAE09073. ).
Length = 274
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 420 TASXKLQSAVSEHQSPTRXGXDGSVTPP-LSSAEPSGARPSARTTASEASEGR 265
T+S S+ S +P+R G DGS+ P L SGAR + E SE R
Sbjct: 80 TSSVVSTSSNSSDNAPSRPGSDGSILEPLLERRASSGARVEDLSLREENSENR 132
>AY129022-1|AAM98765.1| 303|Homo sapiens unknown protein.
Length = 303
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 154 PGLCLAELNLIPLCNMCQTPAPRPPNHASREKR 56
PG +A LNL P C P P PP R R
Sbjct: 49 PGKYMAGLNLHPHPGKCPAPCPSPPVFPGRSTR 81
>L10333-1|AAA59950.1| 776|Homo sapiens nueroendocrine-specific
protein A protein.
Length = 776
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 354 GSVTPPLSSAEPSGARPSARTTASE 280
GS+TPP S EPS A + + SE
Sbjct: 329 GSITPPSSGTEPSAAESQGKGSISE 353
>BC111694-1|AAI11695.1| 702|Homo sapiens RTN1 protein protein.
Length = 702
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 354 GSVTPPLSSAEPSGARPSARTTASE 280
GS+TPP S EPS A + + SE
Sbjct: 255 GSITPPSSGTEPSAAESQGKGSISE 279
>BC090862-1|AAH90862.1| 776|Homo sapiens reticulon 1 protein.
Length = 776
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 354 GSVTPPLSSAEPSGARPSARTTASE 280
GS+TPP S EPS A + + SE
Sbjct: 329 GSITPPSSGTEPSAAESQGKGSISE 353
>BC075801-1|AAH75801.1| 812|Homo sapiens PARP8 protein protein.
Length = 812
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 RPCPTSSANEHCLNLKENALL 64
RPCP + +E CL LK + LL
Sbjct: 365 RPCPAAVKSEECLTLKSHRLL 385
>BC037386-1|AAH37386.1| 494|Homo sapiens PARP8 protein protein.
Length = 494
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 RPCPTSSANEHCLNLKENALL 64
RPCP + +E CL LK + LL
Sbjct: 118 RPCPAAVKSEECLTLKSHRLL 138
>BC029558-1|AAH29558.1| 145|Homo sapiens zinc finger, AN1-type
domain 2A protein.
Length = 145
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 223 LPVTCQTYTQSFRRGKRLFAPD*PGLCLAELNLIPLCNMCQTPAP 89
LPV C Q F + +A + L+P+C +C TP P
Sbjct: 21 LPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVLVPVCPLCNTPIP 65
>AL589739-1|CAI22504.1| 497|Homo sapiens novel protein protein.
Length = 497
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 372 TRXGXDGSVTPPLSSAEPSGARPSARTTASEAS 274
+R G TPP + P G+RP R T +A+
Sbjct: 396 SRGGLHPRGTPPTAQEPPGGSRPEGRATEEQAA 428
>AL513477-6|CAI22608.1| 497|Homo sapiens novel protein protein.
Length = 497
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 372 TRXGXDGSVTPPLSSAEPSGARPSARTTASEAS 274
+R G TPP + P G+RP R T +A+
Sbjct: 396 SRGGLHPRGTPPTAQEPPGGSRPEGRATEEQAA 428
>AK024961-1|BAB15044.1| 501|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21308 fis, clone COL02131. ).
Length = 501
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 RPCPTSSANEHCLNLKENALL 64
RPCP + +E CL LK + LL
Sbjct: 12 RPCPAAVKSEECLTLKSHRLL 32
>AK024003-1|BAB14768.1| 497|Homo sapiens protein ( Homo sapiens
cDNA FLJ13941 fis, clone Y79AA1000850. ).
Length = 497
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 372 TRXGXDGSVTPPLSSAEPSGARPSARTTASEAS 274
+R G TPP + P G+RP R T +A+
Sbjct: 396 SRGGLHPRGTPPTAQEPPGGSRPEGRATEEQAA 428
>D88827-1|BAA21853.1| 683|Homo sapiens zinc finger protein FPM315
protein.
Length = 683
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 159 TSQGCALQN*TLFPSATCVKLPRRGLRITRHGRSAFSFKLRQCS 28
T+ G LF TC K R+G+ +TRH R+ K +C+
Sbjct: 563 TNHGAHKAEKKLFECLTCGKSFRQGMHLTRHQRTHTGEKPYKCT 606
>BC008805-1|AAH08805.1| 683|Homo sapiens zinc finger protein 263
protein.
Length = 683
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 159 TSQGCALQN*TLFPSATCVKLPRRGLRITRHGRSAFSFKLRQCS 28
T+ G LF TC K R+G+ +TRH R+ K +C+
Sbjct: 563 TNHGAHKAEKKLFECLTCGKSFRQGMHLTRHQRTHTGEKPYKCT 606
>AC004232-1|AAC24490.1| 683|Homo sapiens FPM315 protein.
Length = 683
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 159 TSQGCALQN*TLFPSATCVKLPRRGLRITRHGRSAFSFKLRQCS 28
T+ G LF TC K R+G+ +TRH R+ K +C+
Sbjct: 563 TNHGAHKAEKKLFECLTCGKSFRQGMHLTRHQRTHTGEKPYKCT 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,928,708
Number of Sequences: 237096
Number of extensions: 1134861
Number of successful extensions: 3385
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3384
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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