Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1757
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36948-2|CAA85410.1| 268|Caenorhabditis elegans Hypothetical pr... 29 2.1
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 28 2.7
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 28 2.7
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 28 2.7
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 27 6.3
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 27 6.3
AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core alpha-6-... 27 8.3
AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl trans... 27 8.3
>Z36948-2|CAA85410.1| 268|Caenorhabditis elegans Hypothetical
protein D2089.3 protein.
Length = 268
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 151 GLCLAELNLIPLCNMCQTPAPRPPNHASREKRIFFQIKTMFVRGT-CW 11
GL ++ELN+ TP P P H SR R+ Q F GT CW
Sbjct: 23 GLSISELNIDADLLKKLTPVPTVPAHISRTHRVGAQRYRQF--GTRCW 68
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 417 ASXKLQSAVSEHQSPTRXGXDGSVTPPLSSAEPSGARPSARTTASEASE 271
A K Q+A++ + + +G PLS A+ SGA +A A A +
Sbjct: 64 AQAKAQAALAAFMAQQKTSSNGGGGMPLSKAQASGAAAAAAVNAEAAKK 112
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 417 ASXKLQSAVSEHQSPTRXGXDGSVTPPLSSAEPSGARPSARTTASEASE 271
A K Q+A++ + + +G PLS A+ SGA +A A A +
Sbjct: 64 AQAKAQAALAAFMAQQKTSSNGGGGMPLSKAQASGAAAAAAVNAEAAKK 112
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 417 ASXKLQSAVSEHQSPTRXGXDGSVTPPLSSAEPSGARPSARTTASEASE 271
A K Q+A++ + + +G PLS A+ SGA +A A A +
Sbjct: 285 AQAKAQAALAAFMAQQKTSSNGGGGMPLSKAQASGAAAAAAVNAEAAKK 333
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 417 ASXKLQSAVSEHQSPTRXGXDGSVTPPLSSAEPSGARPSARTTASEASE 271
A K Q+A++ + + +G PLS A+ SGA +A A A +
Sbjct: 276 AQAKAQAALAAFMAQQKTSSNGGGGMPLSKAQASGAAAAAAVNAEAAKK 324
>Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical
protein T10H4.4 protein.
Length = 550
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -3
Query: 247 RPACRAPLLPVTCQTYTQ 194
+PA +APLLPVTC Y++
Sbjct: 4 KPA-KAPLLPVTCSVYSK 20
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 399 SAVSEHQSPTRXGXDGSVTPPLSSAEPSGARPSARTTASEASE 271
S SEH + G GS+T SS+E S A + E++E
Sbjct: 300 SESSEHSTIAGAGEAGSITVTASSSEKSPADSQGSASPDESTE 342
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 368 RVGDWCSLTADCNFXDAVCXXSXXVC 445
RVGD CS DC + C S VC
Sbjct: 121 RVGDRCSRHYDCTSPFSACVNSQCVC 146
>AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core
alpha-6-fucosyltransferase protein.
Length = 559
Score = 26.6 bits (56), Expect = 8.3
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = -1
Query: 216 SHAKHIPSHFGVESG---SLHRTSQGCALQN*TLFPSATCVKLPRRGL--RITRHGRSAF 52
S AK + + E G LH + CA+ T F + + L R G + + HG ++
Sbjct: 189 SEAKTLVCNLDKECGFGCQLHHVTY-CAI---TAFATQRMMVLKRDGSSWKYSSHGWTSV 244
Query: 51 SFKLRQCSFAELVGH 7
KL +CSF E VG+
Sbjct: 245 FKKLSKCSFDEAVGN 259
>AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl
transferase protein 8 protein.
Length = 559
Score = 26.6 bits (56), Expect = 8.3
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = -1
Query: 216 SHAKHIPSHFGVESG---SLHRTSQGCALQN*TLFPSATCVKLPRRGL--RITRHGRSAF 52
S AK + + E G LH + CA+ T F + + L R G + + HG ++
Sbjct: 189 SEAKTLVCNLDKECGFGCQLHHVTY-CAI---TAFATQRMMVLKRDGSSWKYSSHGWTSV 244
Query: 51 SFKLRQCSFAELVGH 7
KL +CSF E VG+
Sbjct: 245 FKKLSKCSFDEAVGN 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,130,767
Number of Sequences: 27780
Number of extensions: 163342
Number of successful extensions: 459
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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