Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1755
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 27 0.23
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 26 0.30
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.69
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.69
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.69
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 23 3.7
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 4.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.9
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 4.9
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 4.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.5
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 26.6 bits (56), Expect = 0.23
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 569 QRVVGEAYTGNITVSAHLVDEMLYCFLK 652
Q+++ E Y GN+ V V + C +K
Sbjct: 41 QKIIDEVYNGNVNVEDENVQSYVECMMK 68
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 566 IVHELKPSPTEISLLECQFLSSNHLL*VQLWI 471
+V ELK P ++ L+C + N +L V W+
Sbjct: 47 LVEELKSKPGKLVPLQCDLSNQNDILKVIEWV 78
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 146 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 205
Query: 263 IFNGSL 280
+ S+
Sbjct: 206 VLISSM 211
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 146 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 205
Query: 263 IFNGSL 280
+ S+
Sbjct: 206 VLISSM 211
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 146 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 205
Query: 263 IFNGSL 280
+ S+
Sbjct: 206 VLISSM 211
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 146 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 205
Query: 263 IFNGSL 280
+ S+
Sbjct: 206 VLISSM 211
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 146 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 205
Query: 263 IFNGSL 280
+ S+
Sbjct: 206 VLISSM 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 146 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 205
Query: 263 IFNGSL 280
+ S+
Sbjct: 206 VLISSM 211
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 214 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 273
Query: 263 IFNGSL 280
+ S+
Sbjct: 274 VLISSM 279
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.69
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +2
Query: 104 QIGGSLSDYVNENTWPL-------NAFVPTLAPSTINDGDNDIQIFLKQLSNAYNMTIPG 262
+ GG LSD++ W L N P D IQI + L +N+ +P
Sbjct: 214 ETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPC 273
Query: 263 IFNGSL 280
+ S+
Sbjct: 274 VLISSM 279
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +2
Query: 239 AYNMTIPGIFNGSLPPSSIHSFRRILSNVTESGEMLEML 355
+Y +T+P N P + N+T S +L+ L
Sbjct: 89 SYGLTLPSWTNNIFPKGELFDATVFTYNITNSTPLLKKL 127
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +2
Query: 239 AYNMTIPGIFNGSLPPSSIHSFRRILSNVTESGEMLEML 355
+Y +T+P N P + N+T S +L+ L
Sbjct: 186 SYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLKKL 224
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 204 LSPSFIVDGARVG 166
LSPS + DGAR G
Sbjct: 419 LSPSSLADGARFG 431
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 204 LSPSFIVDGARVG 166
LSPS + DGAR G
Sbjct: 419 LSPSSLADGARFG 431
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +2
Query: 239 AYNMTIPGIFNGSLPPSSIHSFRRILSNVTESGEMLEML 355
+Y +T+P N P + N+T S +L+ L
Sbjct: 201 SYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLKKL 239
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 369 KRPSRMFSTTLLWTTVTKSL 428
KR SR STT LW + K L
Sbjct: 449 KRKSREGSTTYLWEFLLKLL 468
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +2
Query: 269 NGSLPPSSIHSFRRILSNV 325
NG PP + H F+ +++++
Sbjct: 160 NGDKPPLTYHQFQTVVASM 178
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,128
Number of Sequences: 438
Number of extensions: 4473
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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