Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1749
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004910-1|AAO49163.1|  394|Drosophila melanogaster LD03829p pro...   196   2e-50
AF093266-1|AAC71030.1|  394|Drosophila melanogaster homer protein.    196   2e-50
AE014134-1152|AAF52428.1|  394|Drosophila melanogaster CG11324-P...   196   2e-50
AE014134-1151|ABI31295.1|  459|Drosophila melanogaster CG11324-P...   196   2e-50
AE014134-1153|AAF52429.1|  397|Drosophila melanogaster CG11324-P...   192   4e-49
AY084210-1|AAL89948.1|  831|Drosophila melanogaster SD08336p pro...    44   2e-04
AE013599-2829|AAM68439.1|  829|Drosophila melanogaster CG15112-P...    44   2e-04
U21123-1|AAA85120.1|  684|Drosophila melanogaster ena polypeptid...    43   3e-04
BT004488-1|AAO42652.1|  687|Drosophila melanogaster LD23655p pro...    43   3e-04
AE013599-2828|AAX52697.1|  684|Drosophila melanogaster CG15112-P...    43   3e-04
AE013599-2827|AAM68438.2|  684|Drosophila melanogaster CG15112-P...    43   3e-04
AE013599-2826|AAF57598.2|  684|Drosophila melanogaster CG15112-P...    43   3e-04
AE013599-2825|AAX52696.1|  687|Drosophila melanogaster CG15112-P...    43   3e-04

>BT004910-1|AAO49163.1|  394|Drosophila melanogaster LD03829p
           protein.
          Length = 394

 Score =  196 bits (479), Expect = 2e-50
 Identities = 92/109 (84%), Positives = 97/109 (88%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXXFFYDSSRNLYRIISVEGTKAVINST 277
           MGEQPIFTC+AHVFHIDPKTKR+W+          FFYDSSRNLYRIISVEGTKAVINST
Sbjct: 1   MGEQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINST 60

Query: 278 ITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEA 424
           IT NMTFT+TSQKFGQWSDVRANTVYGLGFASEAEL KF+EKFQEVKEA
Sbjct: 61  ITPNMTFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEA 109


>AF093266-1|AAC71030.1|  394|Drosophila melanogaster homer protein.
          Length = 394

 Score =  196 bits (479), Expect = 2e-50
 Identities = 92/109 (84%), Positives = 97/109 (88%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXXFFYDSSRNLYRIISVEGTKAVINST 277
           MGEQPIFTC+AHVFHIDPKTKR+W+          FFYDSSRNLYRIISVEGTKAVINST
Sbjct: 1   MGEQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINST 60

Query: 278 ITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEA 424
           IT NMTFT+TSQKFGQWSDVRANTVYGLGFASEAEL KF+EKFQEVKEA
Sbjct: 61  ITPNMTFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEA 109


>AE014134-1152|AAF52428.1|  394|Drosophila melanogaster CG11324-PA,
           isoform A protein.
          Length = 394

 Score =  196 bits (479), Expect = 2e-50
 Identities = 92/109 (84%), Positives = 97/109 (88%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXXFFYDSSRNLYRIISVEGTKAVINST 277
           MGEQPIFTC+AHVFHIDPKTKR+W+          FFYDSSRNLYRIISVEGTKAVINST
Sbjct: 1   MGEQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINST 60

Query: 278 ITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEA 424
           IT NMTFT+TSQKFGQWSDVRANTVYGLGFASEAEL KF+EKFQEVKEA
Sbjct: 61  ITPNMTFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEA 109


>AE014134-1151|ABI31295.1|  459|Drosophila melanogaster CG11324-PC,
           isoform C protein.
          Length = 459

 Score =  196 bits (479), Expect = 2e-50
 Identities = 92/109 (84%), Positives = 97/109 (88%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXXFFYDSSRNLYRIISVEGTKAVINST 277
           MGEQPIFTC+AHVFHIDPKTKR+W+          FFYDSSRNLYRIISVEGTKAVINST
Sbjct: 1   MGEQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINST 60

Query: 278 ITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEA 424
           IT NMTFT+TSQKFGQWSDVRANTVYGLGFASEAEL KF+EKFQEVKEA
Sbjct: 61  ITPNMTFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEA 109


>AE014134-1153|AAF52429.1|  397|Drosophila melanogaster CG11324-PB,
           isoform B protein.
          Length = 397

 Score =  192 bits (468), Expect = 4e-49
 Identities = 90/107 (84%), Positives = 95/107 (88%)
 Frame = +2

Query: 104 EQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXXFFYDSSRNLYRIISVEGTKAVINSTIT 283
           EQPIFTC+AHVFHIDPKTKR+W+          FFYDSSRNLYRIISVEGTKAVINSTIT
Sbjct: 6   EQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINSTIT 65

Query: 284 ANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEA 424
            NMTFT+TSQKFGQWSDVRANTVYGLGFASEAEL KF+EKFQEVKEA
Sbjct: 66  PNMTFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEA 112


>AY084210-1|AAL89948.1|  831|Drosophila melanogaster SD08336p
           protein.
          Length = 831

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
 Frame = +2

Query: 89  KETMGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGT 256
           ++ M EQ I   +A V   D   K+ W+             ++    N +R++   ++  
Sbjct: 143 QDQMFEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDH 201

Query: 257 KAVINSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQ 436
           + VIN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +
Sbjct: 202 EVVINCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGR 259

Query: 437 QC-GVAGKGVNGN 472
                 G   NGN
Sbjct: 260 VANNPGGPPTNGN 272


>AE013599-2829|AAM68439.1|  829|Drosophila melanogaster CG15112-PB,
           isoform B protein.
          Length = 829

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
 Frame = +2

Query: 89  KETMGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGT 256
           ++ M EQ I   +A V   D   K+ W+             ++    N +R++   ++  
Sbjct: 143 QDQMFEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDH 201

Query: 257 KAVINSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQ 436
           + VIN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +
Sbjct: 202 EVVINCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGR 259

Query: 437 QC-GVAGKGVNGN 472
                 G   NGN
Sbjct: 260 VANNPGGPPTNGN 272


>U21123-1|AAA85120.1|  684|Drosophila melanogaster ena polypeptide
           protein.
          Length = 684

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGTKAV 265
           M EQ I   +A V   D   K+ W+             ++    N +R++   ++  + V
Sbjct: 1   MTEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDHEVV 59

Query: 266 INSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQC- 442
           IN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +   
Sbjct: 60  INCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGRVAN 117

Query: 443 GVAGKGVNGN 472
              G   NGN
Sbjct: 118 NPGGPPTNGN 127


>BT004488-1|AAO42652.1|  687|Drosophila melanogaster LD23655p
           protein.
          Length = 687

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGTKAV 265
           M EQ I   +A V   D   K+ W+             ++    N +R++   ++  + V
Sbjct: 1   MTEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDHEVV 59

Query: 266 INSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQC- 442
           IN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +   
Sbjct: 60  INCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGRVAN 117

Query: 443 GVAGKGVNGN 472
              G   NGN
Sbjct: 118 NPGGPPTNGN 127


>AE013599-2828|AAX52697.1|  684|Drosophila melanogaster CG15112-PE,
           isoform E protein.
          Length = 684

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGTKAV 265
           M EQ I   +A V   D   K+ W+             ++    N +R++   ++  + V
Sbjct: 1   MTEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDHEVV 59

Query: 266 INSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQC- 442
           IN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +   
Sbjct: 60  INCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGRVAN 117

Query: 443 GVAGKGVNGN 472
              G   NGN
Sbjct: 118 NPGGPPTNGN 127


>AE013599-2827|AAM68438.2|  684|Drosophila melanogaster CG15112-PC,
           isoform C protein.
          Length = 684

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGTKAV 265
           M EQ I   +A V   D   K+ W+             ++    N +R++   ++  + V
Sbjct: 1   MTEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDHEVV 59

Query: 266 INSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQC- 442
           IN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +   
Sbjct: 60  INCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGRVAN 117

Query: 443 GVAGKGVNGN 472
              G   NGN
Sbjct: 118 NPGGPPTNGN 127


>AE013599-2826|AAF57598.2|  684|Drosophila melanogaster CG15112-PA,
           isoform A protein.
          Length = 684

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGTKAV 265
           M EQ I   +A V   D   K+ W+             ++    N +R++   ++  + V
Sbjct: 1   MTEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDHEVV 59

Query: 266 INSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQC- 442
           IN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +   
Sbjct: 60  INCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGRVAN 117

Query: 443 GVAGKGVNGN 472
              G   NGN
Sbjct: 118 NPGGPPTNGN 127


>AE013599-2825|AAX52696.1|  687|Drosophila melanogaster CG15112-PD,
           isoform D protein.
          Length = 687

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  MGEQPIFTCKAHVFHIDPKTKRSWMXXXXXXXXXX--FFYDSSRNLYRIIS--VEGTKAV 265
           M EQ I   +A V   D   K+ W+             ++    N +R++   ++  + V
Sbjct: 1   MTEQSIIGARASVMVYDDNQKK-WVPSGSSSGLSKVQIYHHQQNNTFRVVGRKLQDHEVV 59

Query: 266 INSTITANMTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQC- 442
           IN +I   + + + +  F QW D  +  VYGL F+S+ +   F        E +  +   
Sbjct: 60  INCSILKGLKYNQATATFHQWRD--SKFVYGLNFSSQNDAENFARAMMHALEVLSGRVAN 117

Query: 443 GVAGKGVNGN 472
              G   NGN
Sbjct: 118 NPGGPPTNGN 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,290,960
Number of Sequences: 53049
Number of extensions: 345391
Number of successful extensions: 824
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)