Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1747
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4348|AAF56872.2|  284|Drosophila melanogaster CG14509-P...    29   1.7  
BT021210-1|AAX33358.1| 1557|Drosophila melanogaster SD09985p pro...    27   7.0  
AY089249-1|AAL89987.1|  322|Drosophila melanogaster AT03573p pro...    27   7.0  
AF100152-1|AAC80557.1| 1557|Drosophila melanogaster connector en...    27   7.0  
AE014134-603|AAF51108.2|  206|Drosophila melanogaster CG12795-PA...    27   7.0  
AE013599-2454|AAF57874.1| 1557|Drosophila melanogaster CG6556-PA...    27   7.0  
AE013599-925|AAF58900.1|  322|Drosophila melanogaster CG1652-PA ...    27   7.0  

>AE014297-4348|AAF56872.2|  284|Drosophila melanogaster CG14509-PA
           protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 5   SAPVPNKFRERTLS*FERKCASPVTRDSEAAAREFDTCCR 124
           ++P P+    R+ +   R C SP+T  + A  R F T CR
Sbjct: 35  ASPAPSAIPRRSPASAPRICPSPITMTNVAKMRYFQTECR 74


>BT021210-1|AAX33358.1| 1557|Drosophila melanogaster SD09985p protein.
          Length = 1557

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = -3

Query: 299  HRE*GQRRXPPTWSARPACRAPLLP-VTCQTYTQS-FR--RGKRLFAPD*PGLCLAELNL 132
            H    Q+   P  SA P C   +   +T  T+ Q+ +R  RG  +       LC +E   
Sbjct: 1377 HHHHQQQAVTPPSSADPDCDQEIFSQITLPTHNQAGYRSYRGPGILTTSTTNLCSSEGLQ 1436

Query: 131  IPLCNMCQTPAPRPPNHASREK 66
             PL      PAP PP + SR++
Sbjct: 1437 PPL-----PPAPPPPVNTSRQR 1453


>AY089249-1|AAL89987.1|  322|Drosophila melanogaster AT03573p
           protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 358 SVTPPLSSAEPSGARPSARTTASEASEG 275
           +V+P    A P+GA P+A   A+ A++G
Sbjct: 268 AVSPAAEGAAPAGAAPAAEGAATPAADG 295


>AF100152-1|AAC80557.1| 1557|Drosophila melanogaster connector
            enhancer of KSR proteinCNK protein.
          Length = 1557

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = -3

Query: 299  HRE*GQRRXPPTWSARPACRAPLLP-VTCQTYTQS-FR--RGKRLFAPD*PGLCLAELNL 132
            H    Q+   P  SA P C   +   +T  T+ Q+ +R  RG  +       LC +E   
Sbjct: 1377 HHHHQQQAVTPPSSADPDCDQEIFSQITLPTHNQAGYRSYRGPGILTTSTTNLCSSEGLQ 1436

Query: 131  IPLCNMCQTPAPRPPNHASREK 66
             PL      PAP PP + SR++
Sbjct: 1437 PPL-----PPAPPPPVNTSRQR 1453


>AE014134-603|AAF51108.2|  206|Drosophila melanogaster CG12795-PA
           protein.
          Length = 206

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -3

Query: 242 RAPLLPVTCQTYTQSFRRGKRLF-APD*PGLCLAELNLIPLCNMCQTPAPRPP 87
           R   LPV C +  + F      +     PG     +  +P+C +C+ P P PP
Sbjct: 17  RLDFLPVKCDSCDKVFCASHYSYDRHSCPGAYKKNVQ-VPVCPLCREPVPTPP 68


>AE013599-2454|AAF57874.1| 1557|Drosophila melanogaster CG6556-PA
            protein.
          Length = 1557

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = -3

Query: 299  HRE*GQRRXPPTWSARPACRAPLLP-VTCQTYTQS-FR--RGKRLFAPD*PGLCLAELNL 132
            H    Q+   P  SA P C   +   +T  T+ Q+ +R  RG  +       LC +E   
Sbjct: 1377 HHHHQQQAVTPPSSADPDCDQEIFSQITLPTHNQAGYRSYRGPGILTTSTTNLCSSEGLQ 1436

Query: 131  IPLCNMCQTPAPRPPNHASREK 66
             PL      PAP PP + SR++
Sbjct: 1437 PPL-----PPAPPPPVNTSRQR 1453


>AE013599-925|AAF58900.1|  322|Drosophila melanogaster CG1652-PA
           protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 358 SVTPPLSSAEPSGARPSARTTASEASEG 275
           +V+P    A P+GA P+A   A+ A++G
Sbjct: 268 AVSPAAEGAAPAGAAPAAEGAATPAADG 295


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,510,882
Number of Sequences: 53049
Number of extensions: 318864
Number of successful extensions: 1043
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)