Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1745
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 186 1e-47
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 70 2e-12
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 70 2e-12
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 62 5e-10
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 62 5e-10
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 60 2e-09
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 57 1e-08
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 57 2e-08
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 50 2e-06
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 50 2e-06
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 49 3e-06
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 49 4e-06
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 46 4e-05
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 44 1e-04
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 44 1e-04
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 44 2e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 40 0.001
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 40 0.002
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 40 0.002
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 31 0.66
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 31 0.66
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 2.7
U28737-9|AAA68276.1| 345|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z22181-3|CAA80181.3| 416|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 186 bits (454), Expect = 1e-47
Identities = 78/109 (71%), Positives = 93/109 (85%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTDDWSPA 289
G GTLY GE F+LQF F +YPF+SPEV F+G IP HPH+YSNGHICLSIL+DDW+PA
Sbjct: 44 GAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPA 103
Query: 290 LSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNPKKTKWWYHDDSV 436
LSVQSVCLSI+SMLSS KEK+ P D++ YV+TC+KNP KT+WW+HDDSV
Sbjct: 104 LSVQSVCLSILSMLSSSKEKKHPIDDAIYVRTCSKNPSKTRWWFHDDSV 152
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 1 RLQKXLMSLMKEPPPGVTVDGDQASQNLTLWTV 99
RL K L L E P G+ VD S +L W +
Sbjct: 8 RLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKI 40
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/79 (45%), Positives = 44/79 (55%)
Frame = +2
Query: 95 QYTWXGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTD 274
Q T G P + Y+G F L F YPF P+V F HP++ SNG ICL IL
Sbjct: 34 QATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY--HPNINSNGSICLDILRS 91
Query: 275 DWSPALSVQSVCLSIVSML 331
WSPAL++ V LSI S+L
Sbjct: 92 QWSPALTISKVLLSICSLL 110
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/79 (45%), Positives = 44/79 (55%)
Frame = +2
Query: 95 QYTWXGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTD 274
Q T G P + Y+G F L F YPF P+V F HP++ SNG ICL IL
Sbjct: 34 QATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY--HPNINSNGSICLDILRS 91
Query: 275 DWSPALSVQSVCLSIVSML 331
WSPAL++ V LSI S+L
Sbjct: 92 QWSPALTISKVLLSICSLL 110
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 61.7 bits (143), Expect = 5e-10
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTDDWSPA 289
G T +E F L +FT +YP P V FI HP+VY++G ICL IL + WSP
Sbjct: 42 GPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMF--HPNVYADGSICLDILQNRWSPT 99
Query: 290 LSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNPKK 406
V ++ SI S+L + P NS + +N ++
Sbjct: 100 YDVAAILTSIQSLLD--EPNPNSPANSLAAQLYQENRRE 136
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 61.7 bits (143), Expect = 5e-10
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTDDWSPA 289
G T +E F L +FT +YP P V FI HP+VY++G ICL IL + WSP
Sbjct: 42 GPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMF--HPNVYADGSICLDILQNRWSPT 99
Query: 290 LSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNPKK 406
V ++ SI S+L + P NS + +N ++
Sbjct: 100 YDVAAILTSIQSLLD--EPNPNSPANSLAAQLYQENRRE 136
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSN-GHICLSILTDDWSP 286
G P T Y G F L K ++YPF P V F + HP+V S G ICL IL D W+
Sbjct: 45 GPPDTPYAGGMFDLDIKIPDQYPFSPPNVKF--STKIWHPNVSSQTGVICLDILKDQWAA 102
Query: 287 ALSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNP 400
+L++++V LSI +++ C + + P ++ K + P
Sbjct: 103 SLTLRTVLLSIQALM--CTPEPKDPQDAVVAKQYMEKP 138
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSIL---TDD- 277
G P TLY+G F +F + YP+ P + F HP+VY NG +C+SIL DD
Sbjct: 48 GPPKTLYQGGYFKASIRFPSNYPYSPPSMKF--TTKVWHPNVYENGDLCISILHSPIDDP 105
Query: 278 ---------WSPALSVQSVCLSIVSMLS 334
W+P SV+++ LS++S+L+
Sbjct: 106 QSGELACERWNPTQSVRTILLSVISLLN 133
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +2
Query: 128 YEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTDDWSPALSVQSV 307
+ G F L+ +YP +P+V F+ HP++ G ICL IL D WSPAL +++V
Sbjct: 48 FAGGVFKLELFLPEEYPMAAPKVRFMTKIY--HPNIDKLGRICLDILKDKWSPALQIRTV 105
Query: 308 CLSIVSMLSS 337
LSI ++LS+
Sbjct: 106 LLSIQALLSA 115
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Frame = +2
Query: 98 YTWX-GVPG---TLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPV-HPHVYSNGHICLS 262
+ W +PG T++EG + ++ F + +P P+ F P+ HP+VY +G +CLS
Sbjct: 39 FNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKF---EPPLFHPNVYPSGTVCLS 95
Query: 263 ILTD--DWSPALSVQSVCLSIVSMLS 334
+L + DW P++S++ + + I +L+
Sbjct: 96 LLDENKDWKPSISIKQLLIGIQDLLN 121
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Frame = +2
Query: 98 YTWX-GVPG---TLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPV-HPHVYSNGHICLS 262
+ W +PG T++EG + ++ F + +P P+ F P+ HP+VY +G +CLS
Sbjct: 39 FNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKF---EPPLFHPNVYPSGTVCLS 95
Query: 263 ILTD--DWSPALSVQSVCLSIVSMLS 334
+L + DW P++S++ + + I +L+
Sbjct: 96 LLDENKDWKPSISIKQLLIGIQDLLN 121
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPV-------------HPHVYSN-G 247
G GT Y G F ++ YPF+ P+VT I +I HP++ S G
Sbjct: 59 GPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTG 118
Query: 248 HICLSILTDDWSPALSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNPKKT 409
ICL IL D W+ +L++++V LS+ +ML S E P D + N P T
Sbjct: 119 TICLDILKDKWTASLTLRTVLLSLQAMLCS-PEPSDPQDAVVAKQFINNYPMFT 171
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTDD---- 277
G P TLYEG F F YP P++ FI HP++ G++C+SIL D
Sbjct: 42 GPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISE--IWHPNIDKEGNVCISILHDPGDDK 99
Query: 278 ---------WSPALSVQSVCLSIVSMLS 334
W P +V+++ LS++SML+
Sbjct: 100 WGYERPEERWLPVHTVETILLSVISMLT 127
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSIL---TDD- 277
G T + F + F YP P++ F HP++Y++G +C+SIL DD
Sbjct: 43 GPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIF--HPNIYADGRVCISILHAPGDDP 100
Query: 278 ---------WSPALSVQSVCLSIVSMLS 334
WSP S++ + LS+VSML+
Sbjct: 101 TGYELSNERWSPVQSIEKILLSVVSMLA 128
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYS-NGHICLSILTDD-WS 283
GV T YEG F L K YPF +P V FI HP V +G ICL + + W
Sbjct: 387 GVEETPYEGGIFELDIKIGESYPFKAPTVKFITK--IWHPSVSPFDGTICLHDVDNGVWP 444
Query: 284 PALSVQSVCLSIVSMLSSCKEK 349
++++ V + I S +S+ EK
Sbjct: 445 VSMTIYKVLIVIQSWMSNFNEK 466
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFI---GNNIPVHPHVYSNGHICLSIL---- 268
G T Y F F YPF P+ F+ N+ +P++Y++G ICLSIL
Sbjct: 451 GPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWE 510
Query: 269 ---TDDWSPALSVQSVCLSIVSML 331
+ W+P S+ V +SI ++
Sbjct: 511 GRPEEKWNPYCSLMQVLVSIQEVI 534
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 128 YEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILT-DDWSPALSVQS 304
Y F + F YPF P+V F HP+V G CL I+T ++W PA +
Sbjct: 46 YNKGAFKVGITFPVDYPFKPPKVAF--ETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQ 103
Query: 305 VCLSIVSMLS 334
V ++++S+++
Sbjct: 104 VMMALLSLIN 113
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 95 QYTWXGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSIL-- 268
+Y G P T YEG ++ + F +PF P + + N +N +CLSI
Sbjct: 41 RYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTPN----GRFQTNTRLCLSISDY 96
Query: 269 -TDDWSPALSVQSVCLSIVSMLS 334
D W+PA +V ++ ++S ++
Sbjct: 97 HPDTWNPAWTVSTIITGLMSFMN 119
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 137 EKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILT-DDWSPALSVQSVCL 313
+ + F F K+P D P V + +I V G IC+ +LT WS A S++S L
Sbjct: 277 DHLLFSFTFNEKFPCDPPFVRVVAPHIN-QGFVLGGGAICMELLTKQGWSSAYSIESCIL 335
Query: 314 SIVSML 331
I + L
Sbjct: 336 QIAATL 341
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 137 EKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILT-DDWSPALSVQSVCL 313
+ + F F K+P D P V + +I V G IC+ +LT WS A S++S L
Sbjct: 277 DHLLFSFTFNEKFPCDPPFVRVVAPHIN-QGFVLGGGAICMELLTKQGWSSAYSIESCIL 335
Query: 314 SIVSML 331
I + L
Sbjct: 336 QIAATL 341
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHV-YSNGHICLSILTDDWSP 286
G T YE + ++ +KYPF SP + F+ N I HP++ ++G +CL ++ W+
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFL-NKI-FHPNIDEASGTVCLDVINQAWTA 98
Query: 287 ALSVQSV 307
+ ++
Sbjct: 99 LYDLTNI 105
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 119 GTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYS-NGHICL-SILTDDWSPAL 292
G LY+ F L +YPF P + F N HP+V +C +L ++W P
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHN--VYHPNVDPVTCELCSPMLLQENWKPET 111
Query: 293 SVQSVCLSIVSMLS 334
+++ V L+++ +L+
Sbjct: 112 TMEDVLLNLIVLLN 125
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 297 CNQSASRSCRCSVAVRKRDDRLIIRSTLKPVIKILRKQNGGIMMIRCSKPCGS 455
CN+S SR C+ + + + ++ LK IK+L +G M CS C S
Sbjct: 123 CNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVL--DDGAKCMSTCSDTCRS 173
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 98 YTWXGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSIL--- 268
+T G GT +EG + + F YP P + + N N +CLSI
Sbjct: 43 FTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTPN----GRFELNKKVCLSISGYH 98
Query: 269 TDDWSPALSVQSVCLSIVSMLSS 337
+ W P+ S+++ L+++ L S
Sbjct: 99 PETWLPSWSIRTALLALIGFLPS 121
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +2
Query: 125 LYEGEKFVLQFKFTNKYPFDS-PEVTFIGNNIPVHPHVYSNGHICLSILTDD------WS 283
+Y G KF +FK T +++ P V + HP++ +G ICLSIL + W
Sbjct: 71 IYRGGKF--RFKITVPPEYNNVPPVVKCLTKV-WHPNINEDGSICLSILRQNSLDQYGWR 127
Query: 284 PALSVQSVCLSIVSMLS 334
P ++ V +VS+ +
Sbjct: 128 PTRNLTDVVHGLVSLFN 144
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 504 IMRMYGARTSPGRGASNDGLIVLNKDQNVRHKRDHIAHTEL*CHL 638
++R YG +T+ G G + D I + K D H +L C L
Sbjct: 2077 VVRSYGVKTNIGEGGNEDWTIFKTLSPILEKKTDEDCHEQLMCVL 2121
>U28737-9|AAA68276.1| 345|Caenorhabditis elegans Hypothetical
protein F14B8.6 protein.
Length = 345
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +2
Query: 269 TDDWSPALSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNPKKT 409
T+ W+ ++ C +C E+ +N +Y TC N +KT
Sbjct: 141 TNQWTLTATINRKCNGADQYGFNCNEQCSTVNNDYYCYTCGSNGQKT 187
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 110 GVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTD--DWS 283
G P T YE + LQ + YP + P V F + + SNG I LT +WS
Sbjct: 47 GPPRTPYESRIYNLQIQCGGNYPREPPTVRFT-TKVHMVGVNQSNGVIDKRNLTTLRNWS 105
Query: 284 PALSVQSVCLSIVSMLSSCKE 346
+ +++V I + KE
Sbjct: 106 NSYMIKTVLEDIRKNMMMAKE 126
>Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical
protein K09E4.2 protein.
Length = 640
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 442 LLHRIIMIPPFCFLRIFITGFNVERI 365
+LH+ + IPP L + ITG+ + I
Sbjct: 121 ILHKTMRIPPIVLLLVSITGYRIHSI 146
>Z22181-3|CAA80181.3| 416|Caenorhabditis elegans Hypothetical
protein ZK632.4 protein.
Length = 416
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 122 TLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTD 274
TLY G+ V F N + E TF+ N+ PH Y G C+ + D
Sbjct: 226 TLYPGDVGVFAPIFLNYFKLQPGEATFLEPNM---PHAYLKGD-CVECMAD 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,427,373
Number of Sequences: 27780
Number of extensions: 347857
Number of successful extensions: 1041
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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