Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1737
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA...    66   6e-11
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro...    29   6.8  
AY095512-1|AAM12246.1|  418|Drosophila melanogaster AT26524p pro...    29   6.8  
AE014134-64|AAF51528.1|  443|Drosophila melanogaster CG13693-PA ...    29   6.8  

>AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA
           protein.
          Length = 803

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
 Frame = +1

Query: 406 PIDAVWQPVAGTRFRFYVYSAYVEXXXXXXXXXXXXXXXX-GADPVICRLWLPDNR---- 570
           PID  WQ V GTRF+F+VYSAY +                 G + V CR W   +     
Sbjct: 242 PIDGAWQVVNGTRFKFFVYSAYFDRREGARLVRVVGATKTRGPERVWCRFWYGPSAGNGT 301

Query: 571 ------------TLTLKARVKAIRENWNLKYSATYVLC 648
                       + T+ ARVK IRENWNLKYSA ++LC
Sbjct: 302 DAGSSTARAKYSSATVMARVKIIRENWNLKYSACFILC 339


>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
           protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 290 SNNSVSTMTPNTAKNMMKMKKLILARSLAREDIARALHFIV 168
           S  SV T++PNTAK +++++K   A  LA   + R  +  +
Sbjct: 151 SVTSVDTLSPNTAKAVLELQKRCRADKLACLSLTRVTYLSI 191


>AY095512-1|AAM12246.1|  418|Drosophila melanogaster AT26524p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 447 SVLR-LFGLRGTSDGSRGANNRSDKNARSRPRHLPLVAPRQPHADAQGPRQGYKRKLEFK 623
           S+LR L   RG++ GS G N+R   + RS P  +  +        A   R+G   KL FK
Sbjct: 113 SILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSIS-GISAPEKRRGMDYKLNFK 171

Query: 624 IQCNV 638
            +  +
Sbjct: 172 AKAEM 176


>AE014134-64|AAF51528.1|  443|Drosophila melanogaster CG13693-PA
           protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 447 SVLR-LFGLRGTSDGSRGANNRSDKNARSRPRHLPLVAPRQPHADAQGPRQGYKRKLEFK 623
           S+LR L   RG++ GS G N+R   + RS P  +  +        A   R+G   KL FK
Sbjct: 113 SILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSIS-GISAPEKRRGMDYKLNFK 171

Query: 624 IQCNV 638
            +  +
Sbjct: 172 AKAEM 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,524,838
Number of Sequences: 53049
Number of extensions: 716873
Number of successful extensions: 2261
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2261
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)