Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1735
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1105 + 30438140-30438350,30438448-30438926 71 7e-13
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873... 68 9e-12
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450... 67 1e-11
03_06_0293 - 32889813-32890019,32890144-32890301,32891310-328914... 53 2e-07
07_01_0554 - 4121692-4121895,4121991-4122148,4123241-4123354,412... 50 2e-06
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 40 0.003
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 38 0.006
01_07_0095 + 41053562-41053603,41054609-41054846,41055064-410553... 35 0.060
01_05_0710 + 24492337-24493053 34 0.14
02_05_1332 + 35758657-35758728,35758959-35760689 31 0.98
10_08_0611 - 19213994-19214053,19214776-19215732 31 1.3
10_08_0890 + 21339976-21340198,21340293-21340402,21340652-213408... 30 1.7
09_03_0089 + 12265916-12267232 30 1.7
07_03_1631 - 28258897-28259984,28260518-28260772,28260861-282609... 30 1.7
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 30 2.3
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 30 2.3
03_05_0306 - 22956474-22956980 30 2.3
02_01_0302 - 2021221-2023305 30 2.3
08_02_0041 + 11531010-11531366,11531409-11531657 29 3.0
08_01_1022 + 10323158-10323393,10323486-10323531,10325887-103259... 29 3.0
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 3.0
03_01_0201 - 1592180-1592218,1592517-1592602,1592966-1593064,159... 29 3.9
10_01_0037 + 434995-436299 29 5.2
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 29 5.2
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395... 28 6.9
11_01_0787 + 6578158-6579287,6579439-6580870,6581087-6581097,658... 28 6.9
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 28 6.9
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 28 6.9
02_04_0090 - 19643182-19643322,19644192-19644335,19644563-196446... 28 6.9
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 28 6.9
10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408 28 9.1
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 28 9.1
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 28 9.1
08_01_0445 + 3942820-3943030,3943719-3943853,3943942-3944150,394... 28 9.1
05_03_0122 - 8669422-8669609,8669759-8670111,8670669-8670824,867... 28 9.1
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 9.1
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 28 9.1
04_01_0031 + 381389-381841 28 9.1
02_02_0379 + 9565001-9565515,9565553-9565833,9565884-9566084,956... 28 9.1
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 71.3 bits (167), Expect = 7e-13
Identities = 35/115 (30%), Positives = 67/115 (58%)
Frame = +3
Query: 390 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 569
+R AF+RKVYAIL Q+++T+ ++ ++ RP ++ P F + ++I+ I +
Sbjct: 15 LRWAFVRKVYAILSIQMLLTIAVASVVVFVRPVALFFVSTPAGFALYIFLIILPFIVLCP 74
Query: 570 CPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAAXCLGLTLF 734
++ P N + LA+FTAA SF +G++ + + + +L + +TAA + LT +
Sbjct: 75 LYYYYQRHPVNLLLLALFTAAISFAVGLTCAFTKGEVILESAILTAAVVVSLTAY 129
>03_06_0292 -
32886148-32886354,32886997-32887154,32887265-32887378,
32887660-32887924
Length = 247
Score = 67.7 bits (158), Expect = 9e-12
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +3
Query: 390 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVC-LIAMA 566
+R AFIRKVY I+ QL+VT+ P K + VA++++I+ LI M
Sbjct: 32 LRWAFIRKVYVIVSVQLLVTVAVAGAVNLVEPIKTFFQARTPEVLVAYVIIIISPLIMML 91
Query: 567 CCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAAXCLGLTLF 734
R K P N FL +FT SF +G+ + A G+TAA +GLT +
Sbjct: 92 PMIYFRNKHPINLFFLLLFTVCISFSVGLGCLSKNGTVIFQAAGMTAAIVIGLTCY 147
>05_04_0254 -
19444409-19444621,19444724-19444887,19444974-19445087,
19446086-19446395
Length = 266
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +3
Query: 366 GFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLI 545
G E ++R F+RKVY IL QL++T AL + H ++ +P + A ++ +
Sbjct: 43 GISRGESALRWGFVRKVYGILAAQLLLTTAVSALTVLHPTLNATLSSSPTL---ALVLAV 99
Query: 546 VCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAAXCLGL 725
+ + M + K P NF++L +FT SF +G++ + Q VL A+ +T+A L
Sbjct: 100 LPFVLMVPLYHYQHKHPHNFVYLGLFTLCLSFSIGVACANTQGKIVLEALILTSAVVASL 159
Query: 726 TLF 734
T +
Sbjct: 160 TAY 162
>03_06_0293 -
32889813-32890019,32890144-32890301,32891310-32891423,
32891531-32891777
Length = 241
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/115 (26%), Positives = 52/115 (45%)
Frame = +3
Query: 390 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 569
+R A I K+Y IL QL +T A + R + + F + +L + LI +
Sbjct: 27 LRWALIHKIYVILSVQLAMTAAVAAFVVKVRGVSEFFVSSNAGFALYIFLLFLPLIVLCP 86
Query: 570 CPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAAXCLGLTLF 734
+K P N + L +FT A SF +G++ + + A +TA + LT +
Sbjct: 87 LRYYHQKHPVNLLLLGLFTVAISFAVGMTCAYTSGKVIFEAAALTAVVVISLTAY 141
>07_01_0554 -
4121692-4121895,4121991-4122148,4123241-4123354,
4123824-4124082
Length = 244
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/115 (26%), Positives = 53/115 (46%)
Frame = +3
Query: 390 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 569
+R A IRK+Y IL QL++T A+ + R + + + ++I+ I +
Sbjct: 31 MRWALIRKIYVILSMQLLLTAAVAAVVVKVRAISHFFVSSHAGLGLYIFLIILPFIVLCP 90
Query: 570 CPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAAXCLGLTLF 734
+K P N I L +FT A SF +G++ + +L + +T LT +
Sbjct: 91 LYYYHQKHPVNLILLGLFTVAISFAVGMTCAFTSGKVILESAILTTVVVFSLTAY 145
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 339 SVGEDGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPT--KVWVAQNP 512
+VG G + +R AFIRKVYAI+ QL+VT+ IA +Y P + ++A+ P
Sbjct: 25 AVGVAGVACTYMIERPELRWAFIRKVYAIVATQLVVTVA-IAAAVYSVPAIRRFFLARTP 83
Query: 513 FMFWVAFIVLIVCLIA 560
+V++ LIA
Sbjct: 84 ASLAAFVLVIVAPLIA 99
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 390 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 569
+R AF+RKVY IL Q VT + RP + A W+ ++ +++C C
Sbjct: 79 LRWAFVRKVYCILALQFAVTAAIAVVAWAVRPIPRFFAAGSLASWLVYLAILLCPFIGLC 138
>01_07_0095 +
41053562-41053603,41054609-41054846,41055064-41055312,
41055419-41055469,41056044-41056256,41056305-41056367,
41056422-41056474,41056953-41057067,41057150-41057404,
41057531-41058618
Length = 788
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 375 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 554
FT S+R AFI +Y L+ Q M F++ + PT + + +FW F+V +
Sbjct: 297 FTSASVRLAFITIIYPCLILQYMGQAAFLSKNILDMPTGFYDSIPGPIFWPVFVVATLAA 356
Query: 555 I 557
+
Sbjct: 357 V 357
>01_05_0710 + 24492337-24493053
Length = 238
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -2
Query: 332 RWDIARFTVTCAAICRLEARLRGRISALRVCSTRGIRSSWRVSSTLRVA 186
R D A F V A +CRLE R ++ALR + GIR+S ++ ++R A
Sbjct: 153 RPDSATFAVAVAGLCRLEDP-RNALAALREMAVDGIRTSAKLRESVRDA 200
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 31.1 bits (67), Expect = 0.98
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -2
Query: 665 DACANAEQKALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFG 486
D A A A R E+ Q+ E + + +E DYQ YE E + + DF
Sbjct: 535 DIAAEAADDASRELEEQQDVETAEEYDYEMDDVNAAEENDYQEYE--DEDDDLEDDDDFA 592
Query: 485 RSV 477
R V
Sbjct: 593 RKV 595
>10_08_0611 - 19213994-19214053,19214776-19215732
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 461 RSVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSSDELHIPGHLHGSAEL 640
R+ P PP GPK L ++G + D L+HR +E L + G LH A
Sbjct: 35 RAAPFPP------GPKPLPIVGNMAMMDQLTHRGLAALAKEYGGLMHLRL-GRLHAFAVS 87
Query: 641 SARH*RKRLPSGCGA 685
+ + R+ L + GA
Sbjct: 88 TPEYAREVLQAQDGA 102
>10_08_0890 +
21339976-21340198,21340293-21340402,21340652-21340836,
21341415-21341757
Length = 286
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 98 SESRRTVPSGRGVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPAGRICAPSAW 277
S++ P+GR P R + + W + T RL A +S+ R G ++ A + P+ W
Sbjct: 217 SKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRN--ESGKTLVANNV-IPANW 273
Query: 278 LPTCIWR 298
P +R
Sbjct: 274 RPNTFYR 280
>09_03_0089 + 12265916-12267232
Length = 438
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2
Query: 443 GDDGFHRSVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSSDEL 604
G H + P P + LGG SL GGL S+D+L H + DEL
Sbjct: 330 GGARLHDASPSPSFSEFLGGGISLTDGGGLMSSDALHHHLPTRNDAHHHGGDEL 383
>07_03_1631 -
28258897-28259984,28260518-28260772,28260861-28260975,
28261097-28261149,28261238-28261498,28262122-28262175,
28262294-28262536,28262830-28263073,28263877-28263909
Length = 781
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 375 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 554
FT SIR AF+ +Y L+ Q M F++ + + + +FW F++ +
Sbjct: 290 FTAASIRLAFVGAIYPCLVLQYMGQAAFLSRNMSAVEDSFYQSVPRSLFWPVFVIATLAA 349
Query: 555 I 557
+
Sbjct: 350 V 350
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 485 DQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQS 592
D++LGG LH L S + L+H V+ RE++S
Sbjct: 434 DKTLGGQNVLHSLSNARSLELLAHSGEVVLSRESRS 469
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 395 QGFHPKGVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKSLHVLGG 529
QG H G P+ G G H PP Q GG S H GG
Sbjct: 150 QGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHHPGGG 194
>03_05_0306 - 22956474-22956980
Length = 168
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/99 (31%), Positives = 39/99 (39%)
Frame = +2
Query: 80 KLREHVSESRRTVPSGRGVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPAGRI 259
K +EH + SRR P+ G P RW + R PT W + + S R GW G
Sbjct: 56 KAQEHGAWSRRASPASWGEP-RW-LARRPAFPT-WESSRKEASGSSRPGGMGWQKREGG- 111
Query: 260 CAPSAWLPTCIWRRRLR*TGLYPTERLSRRRWRSQGFRF 376
P W R L TG E + R S+ RF
Sbjct: 112 -DPGGWRRA---RPHLGDTGTEVGEEAAHRGGMSEAGRF 146
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = +2
Query: 71 GPTKLREHVSESRRTVPSGRGVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPA 250
G H S T PS P+ T P+ + P G P+ S PS + P S P
Sbjct: 476 GKPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQ 535
Query: 251 GRICAPS 271
PS
Sbjct: 536 STPTHPS 542
>08_02_0041 + 11531010-11531366,11531409-11531657
Length = 201
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Frame = -2
Query: 602 VRRSFASHVGTARHRDETDYQHYEGHPEHEGI-------LGHPDF-GRSVV------QEQ 465
+RR+ HV R + H+ G +H+ + L P F G+ V+ +EQ
Sbjct: 115 MRRNMRRHVHPRRGAVLGNGGHHRGRHDHDDLDNVARVKLSVPKFTGKDVLDAYLYWEEQ 174
Query: 464 SDETHRHHQLTHQDRVHL 411
D+ R H L+HQ RV+L
Sbjct: 175 CDQIFRVHNLSHQRRVNL 192
>08_01_1022 +
10323158-10323393,10323486-10323531,10325887-10325941,
10326027-10326107,10326189-10326400
Length = 209
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/98 (27%), Positives = 43/98 (43%)
Frame = +1
Query: 106 KADRTLRAGRTRKVDRTRKVDHTHRVEATRKVELTLQEERIPRVEHTRRADMRPLSLASN 285
KA +L AGR ++ R VD L+L EE++ R E +A +RP + +
Sbjct: 66 KAAASLFAGR--QLSRCSGVDPDEHPIKKEFERLSLWEEKLNRFEDWDKAPLRPTTTVNT 123
Query: 286 LHMAAQVTVNRAISHRTTQSAKMAKSRVSISLKNLYAG 399
AA + ++ H TT K + +S Y+G
Sbjct: 124 --QAAARFIGHSLPHLTTDQ-KRSMQAISRGEGGSYSG 158
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 473 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLDFA 354
+E+ + H++++ T + R D +YRFF+E+E L A
Sbjct: 149 KEKFENVHKYYKRTKEGRAGRQD-GKSYRFFTELEALHAA 187
>03_01_0201 -
1592180-1592218,1592517-1592602,1592966-1593064,
1593131-1593232,1593398-1593525,1593602-1593693,
1593798-1593869,1593964-1594032,1594116-1594199,
1594292-1594407,1594752-1594875,1594947-1595053,
1595725-1595875
Length = 422
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -1
Query: 258 IRPAGMLHPGDTLLLE---GKLHLAGSLHPVGMV 166
++P +HP D L+LE G++ LAG++ P V
Sbjct: 93 VKPHNFMHPDDHLILEDESGRVTLAGAIPPAAYV 126
>10_01_0037 + 434995-436299
Length = 434
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Frame = +2
Query: 245 PAGRICAPSAWLPTCIWRRRLR*TGLYPTERLSR--------RRWRSQG 367
P GR C LP +WR R P R+ RRWRSQG
Sbjct: 263 PLGRRCTDFQLLPAALWRCRTAALPYAPHRRVRAYLPLSTRGRRWRSQG 311
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = -2
Query: 647 EQKALRCREDG-QEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHP----DFGR 483
E+ R R G ++E RRS SH G +R R + Y G P P D+
Sbjct: 121 EEMRSRARVRGYSDHEGRRS--SHYGRSRSRSRSRSPRYRGRPRSRSYSPAPRRRDDYSA 178
Query: 482 SVVQEQSDETHRHHQLTHQDRVHLSDE 402
S Q +THR Q + H D+
Sbjct: 179 S---PQRKDTHRAKSPRRQPKEHEVDK 202
>12_02_0065 -
13109652-13110746,13110843-13111762,13139462-13139528,
13139607-13139675,13139877-13140020,13140100-13140171,
13140316-13140387,13140466-13140558,13140655-13140726,
13140809-13140925
Length = 906
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 134 VPARWTVPARWTIPTGWRLPARWSLPSRRS 223
V A PAR P+ WR P R S PSRRS
Sbjct: 6 VAAAAAAPARSRWPS-WRTPPRSSTPSRRS 34
>11_01_0787 + 6578158-6579287,6579439-6580870,6581087-6581097,
6581525-6582125,6583981-6585054,6585745-6585873,
6585925-6585963
Length = 1471
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 686 QHRIRLVDACANAEQKALRCREDGQEYEVRRSFASH-VGTARHRDETD 546
Q+ I + AC NA K R +E+ + RSF H +G+ E+D
Sbjct: 962 QNIIEPMGACDNARVKTCRTNAVMREFMLHRSFCDHFIGSLDTMSESD 1009
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 632 RCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHP-DFGRSVVQEQSDE 456
R RE G++ E ASH H E D + G P+H+ G+ + +S +++
Sbjct: 389 RHRERGRDRERDYERASHERDRGHMHERDAEFANGEPKHDQEYGYNYEQHKSHDAYETER 448
Query: 455 THRHHQLTHQ 426
+ RH +Q
Sbjct: 449 SKRHEHEYYQ 458
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 52 WKN*TRRTNQITRACIRIKADRTLRAGRTRKVDRTRKV 165
W+ ++ NQ+ R+C R+ A R + T+K D ++
Sbjct: 90 WQQQQQQHNQLNRSCSRVLAQRLCKGTDTQKKDAALEI 127
>02_04_0090 -
19643182-19643322,19644192-19644335,19644563-19644626,
19644710-19644796,19645371-19645513,19645706-19645771,
19645954-19646046,19646165-19646230,19646363-19646433,
19646882-19646982,19647217-19647317,19647421-19647528,
19647639-19648064
Length = 536
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = -1
Query: 321 SPVHRNLRRHMQVGSQAEGAHIRPAGMLHPGDTLLLEGKLHLAGSLHPVGMV 166
SP H +L H++V G H P D G + G P G V
Sbjct: 35 SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAPGLARPGGAV 86
>01_06_0381 + 28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 28.3 bits (60), Expect = 6.9
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = -2
Query: 698 ANCHQHRIRLVDACANAEQKALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPE 519
++ H+H+++ R E+E R S + H RHRD DY HY E
Sbjct: 753 SDVHKHKLKRHSKDLEPRHHRHRDSSSEDEHEHRSSKSRH----RHRD--DY-HYHEDDE 805
Query: 518 HEGILGHP-DFGRSVVQEQSDETHRHHQLTHQDRVHLSDESP 396
H H D S +++ D+ + Q V + E P
Sbjct: 806 HRSSHRHQRDHRSSSKRKKDDDRDKSKQTIVLPEVSQNQEKP 847
>10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408
Length = 261
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 62 KLEGPTKLREHVSESRRTVPSGRGVPARW 148
+L+GP LR VSES +TV + + +PA W
Sbjct: 221 RLQGPFSLRM-VSESGQTVIAHQVIPANW 248
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 413 GVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKS 511
G DP AD +DG P PP+ G +S
Sbjct: 549 GTLDPMADADANDGSQMQTPAPPSPAGEGRRRS 581
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 723 GPGTRPXLCQLPSAPHPLGRRLR*CRAESSA 631
GP RP L PS P P L CRA +A
Sbjct: 21 GPHRRPGLALRPSPPTPPSSSLSCCRASPAA 51
>08_01_0445 +
3942820-3943030,3943719-3943853,3943942-3944150,
3944258-3944464
Length = 253
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 347 RRWRSQGFRFH*KIYTQGFHPKGVRDPDVSADGDDGFHRSVPVPPTD 487
RR +GFR F+P G D +S D DD P PPT+
Sbjct: 42 RRAAEEGFRLR-----VAFNPSGNFDLSLSTDQDDAPQVEPPPPPTE 83
>05_03_0122 -
8669422-8669609,8669759-8670111,8670669-8670824,
8670999-8671168,8672133-8672297,8673190-8673384,
8673506-8673634,8673759-8673980
Length = 525
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 107 RRTVPSGRGVPARWTVPARWTIPTGWRLPARWSLPS 214
R+T PS P+ + +P R GW + W LPS
Sbjct: 28 RKTPPSPPPPPSSFGLPVRAVCLGGWLVTEGWILPS 63
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +2
Query: 458 HRSVPVPPTDQ----SLGGPKSLHVLGGLHSADSLSHRDGVL 571
H++ P PP DQ SLG S L LH++ S S D +L
Sbjct: 17 HQASPPPPIDQQAAESLGKSPSASDLTALHASSSSSAADALL 58
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/81 (23%), Positives = 32/81 (39%)
Frame = -2
Query: 644 QKALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQ 465
QK C ++Y++ F SH+ + H DY + + G+ + Q+Q
Sbjct: 199 QKVFFCSLCNKQYKLAHEFESHLSSYDHNHRKDYISDKFTVVTTEVQGN-ERNAKQQQQQ 257
Query: 464 SDETHRHHQLTHQDRVHLSDE 402
+ HR Q Q+ S E
Sbjct: 258 PADAHRKQQQQKQEPSESSSE 278
>04_01_0031 + 381389-381841
Length = 150
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 104 SRRTVPSGRGVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIP 247
+R VP R RW P T+ W LP S P + P S P
Sbjct: 59 TRTGVPPPRTRERRWCTPRTSTLRREWALPDTASPPPPLPLEPAPSAP 106
>02_02_0379 +
9565001-9565515,9565553-9565833,9565884-9566084,
9566253-9566309,9566955-9567019,9567199-9567420
Length = 446
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 182 WRLPARWSLPSRRSVSPGWSIPAGRICA-PSAWLPTCIWRRRLR 310
+RL RW P R S++P + P + A P A +P R++R
Sbjct: 150 YRLSPRWRSPDRLSITPTTAAPPATVLASPHAPMPLPDEPRKVR 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,624,577
Number of Sequences: 37544
Number of extensions: 502964
Number of successful extensions: 1947
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1939
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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