Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1735
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 87 1e-17
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 81 8e-16
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 81 8e-16
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 60 1e-09
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 33 0.29
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 32 0.38
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 32 0.38
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 32 0.38
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 31 0.87
U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 29 3.5
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 29 3.5
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 4.7
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 6.2
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 28 6.2
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 28 6.2
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 28 6.2
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 6.2
AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein. 28 6.2
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 6.2
Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/125 (30%), Positives = 72/125 (57%)
Frame = +3
Query: 375 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 554
F+ +++R AF+RKV+ ++ +T F + + P + WV N +++++A IV +V
Sbjct: 22 FSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVA 81
Query: 555 IAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAAXCLGLTLF 734
IA++CC ++RR+ P N I L IFT + + + + Y +VL+ + IT + +F
Sbjct: 82 IALSCCGNLRRQFPVNIILLTIFTLSAAVMTMFVTACYNVQSVLICLCITTVCSGSVIIF 141
Query: 735 ALXTK 749
++ TK
Sbjct: 142 SMKTK 146
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 81.0 bits (191), Expect = 8e-16
Identities = 39/133 (29%), Positives = 71/133 (53%)
Frame = +3
Query: 351 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 530
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 531 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAA 710
+++ V +++ CC VRRK P N I IFT A S + + ++ + A+ VL+A+ I
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIG 185
Query: 711 XCLGLTLFALXTK 749
+ + A TK
Sbjct: 186 CTFSIVIVASQTK 198
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 81.0 bits (191), Expect = 8e-16
Identities = 39/133 (29%), Positives = 71/133 (53%)
Frame = +3
Query: 351 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 530
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 531 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVGITAA 710
+++ V +++ CC VRRK P N I IFT A S + + ++ + A+ VL+A+ I
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIG 185
Query: 711 XCLGLTLFALXTK 749
+ + A TK
Sbjct: 186 CTFSIVIVASQTK 198
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 60.5 bits (140), Expect = 1e-09
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +3
Query: 342 VGEDGEVKG-FDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFM 518
V DG + G + IR AF+RKV I+ QL+ T+G A +Y+ P + Q
Sbjct: 52 VDADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAA-IYNIPNSNQLLQKHA- 109
Query: 519 FWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQADAVLMAVG 698
W+ F L+ + + R+ P N++ LA FTA Q+ +G ++++A VL A
Sbjct: 110 -WIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAV 168
Query: 699 ITAAXCLGLTLFALXTK 749
IT L + L K
Sbjct: 169 ITGLVVASLFAYTLQNK 185
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/88 (27%), Positives = 33/88 (37%)
Frame = -2
Query: 689 HQHRIRLVDACANAEQKALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEG 510
H H+ R VD ++K ED E++ R H + Q GHPEH
Sbjct: 155 HGHQKRSVDEHHGHQKKNA---EDHHEHQKRSEHVEHQAEMHEHQKRSTQEVSGHPEH-- 209
Query: 509 ILGHPDFGRSVVQEQSDETHRHHQLTHQ 426
V + + HRHH+ T Q
Sbjct: 210 --------HLVKRSGGEGGHRHHRSTDQ 229
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 510 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQ 671
P++ A + +C+IA A RR+A FI + ++T + + G+ + Y+
Sbjct: 622 PYVLASAMFITAICIIAFAITNARRRRAMRGFIEVDVYTPEERHVAGMQVNGYE 675
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 510 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQ 671
P++ A + +C+IA A RR+A FI + ++T + + G+ + Y+
Sbjct: 620 PYVLASAMFITAICIIAFAITNARRRRAMRGFIEVDVYTPEERHVAGMQVNGYE 673
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 510 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYQ 671
P++ A + +C+IA A RR+A FI + ++T + + G+ + Y+
Sbjct: 616 PYVLASAMFITAICIIAFAITNARRRRAMRGFIEVDVYTPEERHVAGMQVNGYE 669
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 136 TRKVDRTRKVDHTHRVEATRKVELTL-----QEERIPRVEHTRRADMRPLSLASNLHMAA 300
+++V T+ +VEA +K E TL +EER +VE + A ++ ASN+ AA
Sbjct: 718 SKEVKHTKTAPWAAKVEAPQKSEKTLLEIQKEEERKFKVEQEKNAKLKAKEQASNITSAA 777
Query: 301 QVTVNRA 321
+ +++
Sbjct: 778 AIAGDKS 784
>U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical
protein T01B11.1 protein.
Length = 343
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 489 KVWVAQNPFMFWVAFIVLIV--CLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLL 647
K+W+ + FWV I +++ L+A A ++RK F+FL AA L
Sbjct: 8 KLWMFISKCQFWVILITVLISLLLVAKAFYNLMKRKRSNYFVFLISIIAANVLTL 62
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/75 (18%), Positives = 36/75 (48%)
Frame = +1
Query: 139 RKVDRTRKVDHTHRVEATRKVELTLQEERIPRVEHTRRADMRPLSLASNLHMAAQVTVNR 318
+K+D +K + HR + R+ + +E+ + + + + + L + ++ R
Sbjct: 19 KKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKKESLKR 78
Query: 319 AISHRTTQSAKMAKS 363
+S ++ +AK AK+
Sbjct: 79 KLSEKSEPAAKKAKA 93
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/75 (18%), Positives = 36/75 (48%)
Frame = +1
Query: 139 RKVDRTRKVDHTHRVEATRKVELTLQEERIPRVEHTRRADMRPLSLASNLHMAAQVTVNR 318
+K+D +K + HR + R+ + +E+ + + + + + L + ++ R
Sbjct: 66 KKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKKESLKR 125
Query: 319 AISHRTTQSAKMAKS 363
+S ++ +AK AK+
Sbjct: 126 KLSEKSEPAAKKAKA 140
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 513 FMFWVAFIVLIVCLIAMACCPDVRRKAPT 599
F+FW + +++VC+I + C V K T
Sbjct: 210 FLFWSSLFLMLVCVILLGCSRKVADKQVT 238
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 572 TARHRDETDYQHYEGHPEHEGILGHPD-FGRSVVQEQSDETHRHHQLTHQDRVH 414
T++H + +Y G H G + + + G+ V D+ H H+ H H
Sbjct: 896 TSQHSNAQEYSTVHGSQTHRGSVVYDEPHGQVVYDIPHDQEHHHYDTVHVQHHH 949
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 156 GTVHLAGTPRPEGTVRLDSDTCSRNLVGPSSLVFP 52
G V++AGTP P GT + R+L G +S P
Sbjct: 651 GNVNVAGTPAPTGTPAVAPAAPRRDLPGAASAATP 685
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Frame = -2
Query: 596 RSFASHVGTARHRDETD-YQHYEGHPEHEGILGHPDFGRSVVQEQSDE---THRHHQLTH 429
++ A+ TA D + H GH G H G S +E+ H HH +H
Sbjct: 64 KAAAAEAATAAAHDHGHAHDHDHGHAHDHGH-AHDHHGHSHDEEEDHHHGHAHDHHGHSH 122
Query: 428 QDRVHLSDESPAYRFFSEIETLDFAIF 348
+D H A + E + F F
Sbjct: 123 EDHGHSHGAESAKQVGDEYQYTGFLSF 149
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 510 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 632
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 412 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 450
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 510 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 632
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 1000
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical protein
D1044.2a protein.
Length = 1051
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 510 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 632
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 1000
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 476 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 580
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein.
Length = 279
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 476 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 580
PPT S GG S V+G + + R VLSRR
Sbjct: 41 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 75
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 476 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 580
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical
protein C31A11.6 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 417 YAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMACCPDVRRKAP 596
Y I MC + V M F+ RPT V +F+ +F++LI+C + P + P
Sbjct: 96 YFIPMC-VSVLMTMNRFFIVIRPTDQRVFGQRRIFFYSFLILILC-FTLLLIPRL-SYCP 152
Query: 597 TNFI 608
NF+
Sbjct: 153 VNFL 156
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 473 QEQSDETHRHHQLTHQDRVHLSD 405
Q ++DE +H QL H++ +HLS+
Sbjct: 32 QSRADEAIKHQQLLHRNLLHLSN 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,260,018
Number of Sequences: 27780
Number of extensions: 381233
Number of successful extensions: 1409
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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