Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1733
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   235   2e-62
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   235   2e-62
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    44   1e-04
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    44   1e-04
BT030141-1|ABN49280.1|  374|Drosophila melanogaster IP17450p pro...    28   8.8  
BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p pro...    28   8.8  
AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-P...    28   8.8  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/125 (86%), Positives = 120/125 (96%)
 Frame = +3

Query: 3   VFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 182
           VFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEKF+ VDIRV 
Sbjct: 14  VFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVR 73

Query: 183 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 362
           V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKK
Sbjct: 74  VSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKK 133

Query: 363 FGGPG 377
           FGGPG
Sbjct: 134 FGGPG 138


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/125 (86%), Positives = 120/125 (96%)
 Frame = +3

Query: 3   VFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 182
           VFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEKF+ VDIRV 
Sbjct: 14  VFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVR 73

Query: 183 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 362
           V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKK
Sbjct: 74  VSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKK 133

Query: 363 FGGPG 377
           FGGPG
Sbjct: 134 FGGPG 138


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
 Frame = +3

Query: 15  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 191
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 192 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 371
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 372 PG 377
            G
Sbjct: 384 EG 385


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
 Frame = +3

Query: 15  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 191
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 192 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 371
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 372 PG 377
            G
Sbjct: 384 EG 385


>BT030141-1|ABN49280.1|  374|Drosophila melanogaster IP17450p
           protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 129 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 290
           P L  G+EK S+ D+   ++  G V  +  I      A+I FY  ++++  KK+
Sbjct: 81  PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134


>BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p
           protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 129 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 290
           P L  G+EK S+ D+   ++  G V  +  I      A+I FY  ++++  KK+
Sbjct: 81  PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134


>AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-PA
           protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 129 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 290
           P L  G+EK S+ D+   ++  G V  +  I      A+I FY  ++++  KK+
Sbjct: 81  PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,007,669
Number of Sequences: 53049
Number of extensions: 428943
Number of successful extensions: 1140
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)