Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1732
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 444 e-127
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 427 e-122
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 304 6e-85
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 223 1e-60
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 136 2e-34
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.8
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 4.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 444 bits (1093), Expect = e-127
Identities = 206/227 (90%), Positives = 212/227 (93%)
Frame = +3
Query: 18 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPA 197
KIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP
Sbjct: 180 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 239
Query: 198 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEAL 377
RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEAL 299
Query: 378 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 557
QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 359
Query: 558 VLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGXAXIXNLVP 698
VLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSG A I LVP
Sbjct: 360 VLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVP 406
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 427 bits (1052), Expect = e-122
Identities = 197/227 (86%), Positives = 209/227 (92%)
Frame = +3
Query: 18 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPA 197
KIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIEALDAILPP+
Sbjct: 180 KIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPS 239
Query: 198 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEAL 377
RPTDK LRLPLQDVYKIGGIGTVPVGRVETG+LKPG +V FAPA +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEAL 299
Query: 378 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 557
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTP
Sbjct: 300 TEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTP 359
Query: 558 VLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGXAXIXNLVP 698
VLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSG A I L P
Sbjct: 360 VLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQP 406
Score = 21.8 bits (44), Expect = 6.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 400 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 293
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 304 bits (746), Expect = 6e-85
Identities = 140/152 (92%), Positives = 144/152 (94%)
Frame = +3
Query: 18 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPA 197
KIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP
Sbjct: 123 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 182
Query: 198 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEAL 377
RPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEAL
Sbjct: 183 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEAL 242
Query: 378 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 473
QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 223 bits (546), Expect = 1e-60
Identities = 104/117 (88%), Positives = 108/117 (92%)
Frame = +3
Query: 348 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 527
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 528 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGXAXIXNLVP 698
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSG A I L P
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQP 117
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 136 bits (329), Expect = 2e-34
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 18 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPA 197
KIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP
Sbjct: 107 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 166
Query: 198 RPTDK 212
RPTDK
Sbjct: 167 RPTDK 171
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 426 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 533
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 545 RLHTSVGLPHCPHC 586
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -3
Query: 629 STTVNFFFDFCKFAGNVGSVAIQHWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 450
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 449 TTT 441
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 6.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -3
Query: 629 STTVNFFFDFCKFAGNVGSVAIQHWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 450
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 449 TTT 441
T T
Sbjct: 137 TVT 139
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 101 FG*RLQHVVSVPSRNGHESDSSWV 30
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,697
Number of Sequences: 438
Number of extensions: 4728
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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