Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1729
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    29   0.14 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    29   0.18 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   2.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   3.9  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   6.7  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   6.7  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   8.9  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    23   8.9  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = +1

Query: 97   SRIRPGSRAELRSRQ*KVI-PKSRSPGCTPSTRCGRACPPSYRTTAATGSTLRELRRSCL 273
            SR R  SR+  RSR       +SRS   +  +R         ++  +  S  R   RS  
Sbjct: 1095 SRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGSRSRSRSGS 1154

Query: 274  KSAPSSTGTRAAWRS---SRATCRSGSCARSSSP 366
            +++  S  +R+  RS   SR+  RSGS +R +SP
Sbjct: 1155 QASRGSRRSRSRSRSRSGSRSRSRSGSGSRQASP 1188



 Score = 23.0 bits (47), Expect = 8.9
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 259  RRSCLKSAPSSTGTRAAWRS---SRATCRSGSCARSSS 363
            RRS  +S  S +G+R+  RS   SRA  R+GS +RS S
Sbjct: 1063 RRSRSRSR-SGSGSRSRSRSGSGSRAGSRAGSGSRSRS 1099


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = -1

Query: 380 PVAGHGLDDLAHE-PLLHVARELLQAALVPVDEGALFKHDLRSSLSVEPVAAV--VRYDG 210
           P+AGH L  +  E P L V   L    + P+ +  L+  ++ +S+ +EP A +  +R+  
Sbjct: 360 PLAGHPLSGIKQELPELPVRHSLSSELMQPL-KMPLYADEMSASIGLEPHAHLNHLRHKS 418

Query: 209 GHALP 195
            H +P
Sbjct: 419 KHPIP 423


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 160 SRSPGCTPSTRCGRACPP 213
           S SP  TP+T CG   PP
Sbjct: 461 SSSPPLTPNTICGLIAPP 478


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/37 (21%), Positives = 17/37 (45%)
 Frame = +3

Query: 543 VPEAXPQVSEXRHHXAXGDGRQREXRALHRHEMRHSQ 653
           +P+   +  +  HH +    +Q++ +  H H   H Q
Sbjct: 629 IPDVGQKADQTDHHQSQQPQQQQQHQHHHHHHHHHHQ 665


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 383 QPVAGHGLDDLAHEPLLHV 327
           +PV+GH  D L+   L H+
Sbjct: 233 EPVSGHSTDPLSQNYLTHI 251


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 17/72 (23%), Positives = 26/72 (36%)
 Frame = -1

Query: 398 HGDGPQPVAGHGLDDLAHEPLLHVARELLQAALVPVDEGALFKHDLRSSLSVEPVAAVVR 219
           +GDG +P      D    +      REL    L   DE  +F   + S ++ +    +  
Sbjct: 103 NGDGGRPAYSGNSDPSMDQVKTDKPRELYIPPLPTEDESLIFGSGISSGINFDKFEEIQV 162

Query: 218 YDGGHALPHRVE 183
              G   P  VE
Sbjct: 163 RVSGENPPDHVE 174


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 5   RSTPPSPPGIMPSQDPTM 58
           R  PP+PP   PSQ P +
Sbjct: 63  RPRPPAPPTNAPSQLPAL 80


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 389 GPQPVAGHGLDDLAHEPLLHVARELLQ 309
           G  PVA HG    +H  + H AR  +Q
Sbjct: 18  GLLPVAHHGSIATSHSTIQHHARPAIQ 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,602
Number of Sequences: 2352
Number of extensions: 13206
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)