Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1728
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 41 0.001
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 41 0.001
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 40 0.002
Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.011
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 36 0.045
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 35 0.078
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 34 0.10
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 34 0.14
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 30 1.7
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 30 2.2
U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 29 2.9
L17337-5|ABM74562.1| 306|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 6.8
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 6.8
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 6.8
X98132-1|CAA66831.1| 387|Caenorhabditis elegans N-acetyllactosa... 28 6.8
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 6.8
L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin fam... 28 6.8
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 28 8.9
DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin f... 28 8.9
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/159 (21%), Positives = 62/159 (38%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTI 185
+ N+C+ ++F+V L ++ E+A I GY H + L + +Y + V+
Sbjct: 76 RENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESAW 135
Query: 186 DIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLV 365
D +CCG+ + +DW IP +CC + + C + GC+ +
Sbjct: 136 DKTHQLFECCGVTNSSDWLTF-TTIPDSCCIEE------IEGCARENAPLFEPGCIHSVE 188
Query: 366 VHMKDXXXXXXXXXXXXXXXXXXXXXFACCLARSIRSQY 482
+ FACCL++SI +
Sbjct: 189 QWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSILKDF 227
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Frame = +3
Query: 12 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNL-NASITQYPVDKNVQKTID 188
N C ++ + + L+ + E + + H E + +L N + Y +D N+ K ++
Sbjct: 92 NRCALVFYLLMLIFSMIMEGCLIYFTFSYHATYEQELNASLPNDILNNYNLDPNIAKAVN 151
Query: 189 IIQTDLQCCGINSPADW-----ADHGLP-----------IPSTCCSAQEINDGVVAACTE 320
+Q D +CCG N+ DW DH LP IP +CC + G A ++
Sbjct: 152 YLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVVQRVQYIPDSCCKSTHQRKG--CALSD 209
Query: 321 NSTNFHSKGCL 353
+ N +GCL
Sbjct: 210 SPNNIFYRGCL 220
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTI 185
+ N + +S L ++ +AE + G+ Y L++ + LN + Y D ++Q I
Sbjct: 108 RENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVVGYRDDPDLQLLI 167
Query: 186 DIIQTDLQCCGINSPADW-ADHGLPIPSTCCSAQEINDGVVAACTENSTNFHSK 344
D +Q CCGIN DW + I + ++ E GV +C NS+ K
Sbjct: 168 DSMQETWMCCGINGADDWDRNTYFSIEAREVASPEAG-GVPFSCCINSSKLEFK 220
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-TQYPVDKNVQKT 182
K N C + F L++ F ELA + + K ++ V ++ +I +Y + +
Sbjct: 80 KMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSSETAFKDA 139
Query: 183 IDIIQTDLQCCGINSPADW 239
D +Q +CCG+ + DW
Sbjct: 140 FDTVQEKFECCGVKTYTDW 158
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Frame = +3
Query: 27 ITFSVFLLIIF-VAELAVGIAGYMKHTDLEDSVMRNLN--ASITQYPVDKNVQKTIDIIQ 197
I F + L+++ +A + + +L S++ N+N A +T+ + + T D +Q
Sbjct: 82 IGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVVTKIGREIKLSLTWDHLQ 141
Query: 198 TDLQCCGINSPADWA-----DHGLPIPSTCCSAQEIN-DGVVAAC---TENSTNFHSKGC 350
+LQCCG+++ DW + L P +CC Q + + C + + + KGC
Sbjct: 142 RELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDAENGTENCGKLPDEQSLLYQKGC 201
Query: 351 LTK 359
K
Sbjct: 202 FPK 204
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/130 (21%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASITQYPVDKNVQ 176
+ N ++ F+ + + ++ +AV + + + +TD + + N L ++ Y ++N+
Sbjct: 96 RDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLA 155
Query: 177 KTIDIIQTDLQCCGINSPAD-WADHGLPIPSTCCSA--QEINDGVVAACTENSTNFHSKG 347
+ +D +Q +L+CCG++S A + D + C ++ Q GV +C S + G
Sbjct: 156 EIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAG 215
Query: 348 CLTKLVVHMK 377
L+ M+
Sbjct: 216 SSNPLLPAMR 225
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/130 (21%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASITQYPVDKNVQ 176
+ N ++ F+ + + ++ +AV + + + +TD + + N L ++ Y ++N+
Sbjct: 120 RDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLA 179
Query: 177 KTIDIIQTDLQCCGINSPAD-WADHGLPIPSTCCSA--QEINDGVVAACTENSTNFHSKG 347
+ +D +Q +L+CCG++S A + D + C ++ Q GV +C S + G
Sbjct: 180 EIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAG 239
Query: 348 CLTKLVVHMK 377
L+ M+
Sbjct: 240 SSNPLLPAMR 249
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 24 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNV-QKTIDIIQT 200
+I +S+ + ++ VA L+ GI K L+ + LN + Y V Q+++D +QT
Sbjct: 143 LIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELSDALNYMVQHYYQGPGVVQESLDHLQT 202
Query: 201 DLQCCGINSPADWADHGLPIPSTC 272
+CCG +D+ IP +C
Sbjct: 203 AFRCCGNAGCSDFRVFRQDIPRSC 226
>Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical
protein C50H2.6 protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 255 PIPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLV 365
P+P+T CSA I++ V +C ST H+K L+K V
Sbjct: 96 PLPATFCSAASIDNNAVKSCKNKSTTLHAKILLSKEV 132
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 35.5 bits (78), Expect = 0.045
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Frame = +3
Query: 21 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-------TQYPVDKNVQK 179
+++ F +FL+ F+A++A+G + D SV N+ + T P +K V +
Sbjct: 55 LLLAFVMFLIGTFLADVAMGTLSLF-YKDKVYSVKENVREIVKSKYGVMTSEPENKMVTE 113
Query: 180 TIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGV--VAACTE 320
ID +Q +CCG P D+ ST ++EI + V+ CT+
Sbjct: 114 FIDKLQFYEKCCGSLGPTDYISSRWS-QSTNQDSEEIESPLFPVSCCTQ 161
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 39 VFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQC 212
V + I+FV ++ V I ++ + D + V + + Y + + T+D + T L+C
Sbjct: 99 VLVFIVFVVKI-VAIVMFLANNDHLRREFVGVYRDELVANYHNNSRTKNTLDWVHTSLKC 157
Query: 213 CGINSPADWADHGLPIPSTC 272
CG N D+ G P++C
Sbjct: 158 CGANGCEDFLPAG-NFPTSC 176
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 448 HAASLVPFAANMKQFKLQQNTKQNLYDKTITNKNNEIQFYFITYLYLMFKRVFXISVPTQ 627
H +S + F ANM++ K+Q + KT+T N + FI+++YL K ++ ++V Q
Sbjct: 164 HLSSALRFQANMERKKVQVH-------KTVTFLNFQYSSGFISWIYLFTKVLYFLNVFAQ 216
Query: 628 TYL 636
YL
Sbjct: 217 LYL 219
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 24 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTD 203
+IT+ V ++++ E+ G+A ++ L D+ ++A T N + IIQ
Sbjct: 101 MITYLVLIIVLVSLEIGCGVAVLVRRNSLHDNTNSLIDAMYT-----TNSVNDLKIIQDK 155
Query: 204 LQCCGINS 227
CCGI +
Sbjct: 156 YNCCGIEN 163
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 39 VFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQC 212
V + ++FV ++ V I ++ + D + V + + Y + + T+D + T L+C
Sbjct: 88 VLVFLVFVVKI-VAIVMFLANKDHLRREFVGVYRDELVANYHNNSRTKNTLDWVHTSLKC 146
Query: 213 CGINSPADWADHGLPIPSTC 272
CG N D+ G P++C
Sbjct: 147 CGANGCEDFLPAG-NFPTSC 165
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S MR S + D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S MR S + D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Frame = +3
Query: 18 CMIITFSVFLLIIFVAELAVGIAGYMKH-TDLEDSVMRNLNASITQYPVDKNVQKTIDII 194
C + + + +++I + + + H T L ++ +L + + K + ++ D +
Sbjct: 93 CAVASIVIAVMLIIGGCIGLNFRDQLTHYTPLNLKMLTSLRELYGTHDM-KGITESWDAL 151
Query: 195 QTDLQCCGIN--------SPADWADH----GLPIPSTCCSAQEI 290
Q++ +CCG+N + W H L IP +CC EI
Sbjct: 152 QSNFKCCGVNGTDNAQIWKTSKWYMHQRAPKLLIPESCCIPSEI 195
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 21 MIITFSVFLLIIFVA-ELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQ 197
+++ +F+++I A EL + + S+ + L S Y + KN++ IQ
Sbjct: 95 VLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQQVLKKSSATYELRKNIKP----IQ 150
Query: 198 TDLQCCG 218
QCCG
Sbjct: 151 NVFQCCG 157
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 21 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQT 200
++ + +F++I+F+ E+A+GI +K + +V + S + N Q I
Sbjct: 99 LLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVKEYVFDSF-----NMNAQADISAFNF 153
Query: 201 DLQCCGI-NSPADWADHGLPIPSTCCSA 281
CCG N P G P TC SA
Sbjct: 154 RYNCCGAENLPNLNCFAGQP---TCSSA 178
>U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family
protein 18 protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 SKXNHCMIITFSVFLLIIFVAELAVGIAGYMK---HTDLEDSVMRNLNASITQYPVDKNV 173
S+ H + T+S+ + ++ V+ + ++ + ++ + + L + Y
Sbjct: 91 SEAFHVNLKTYSISIYLLCVSFMVCVLSYTLSLRISSEYDTKMTTILMTNYLNYNESMES 150
Query: 174 QKTIDIIQTDLQCCGINSPADWAD 245
++ +D I + CCG+NS D+ D
Sbjct: 151 RRLVDRIHIEYSCCGVNSIEDFVD 174
>L17337-5|ABM74562.1| 306|Caenorhabditis elegans Hypothetical
protein ZK686.6 protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 386 YGARRRWSRYRFGSAPRCDIRMLPRSFHSQPI 481
Y R R SR + S+P+C I LP+ F Q I
Sbjct: 7 YEKRERSSRIQKCSSPQCCINRLPKKFQDQDI 38
>Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical
protein W02B12.11 protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQKT 182
+ +HC+I +FS LIIFVA + ++++ L D R + A+ Q V+ NVQ++
Sbjct: 2 RTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQS 59
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>X98132-1|CAA66831.1| 387|Caenorhabditis elegans
N-acetyllactosamine synthase protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 KXNHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQKT 182
+ +HC+I +FS LIIFVA + ++++ L D R + A+ Q V+ NVQ++
Sbjct: 2 RTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQS 59
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 266
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin family
protein 2 protein.
Length = 234
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 21 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN-ASITQYPVDKNVQKTIDIIQ 197
++ T V ++I F+ EL IA + K L + R N +T D I IIQ
Sbjct: 99 VLATCLVLIVIFFIMELGGSIALWSKRGSLRSLLYRFANDIYLTNSVFD------ISIIQ 152
Query: 198 TDLQCCGI 221
CCG+
Sbjct: 153 NTYNCCGV 160
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = +1
Query: 556 IQFY--FITYLYLMFKRVFXISVPTQTY 633
+++Y ++TYLYL K +F ++V TQ Y
Sbjct: 213 VRYYESYLTYLYLAIKCLFLMNVLTQMY 240
>DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin
family protein protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 132 LNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWAD 245
L + Y ++ +D I + CCG+NS D+ D
Sbjct: 25 LMTNYLNYNESMESRRLVDRIHIEYSCCGVNSIEDFVD 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,308,153
Number of Sequences: 27780
Number of extensions: 328299
Number of successful extensions: 1075
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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