Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1727
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p pro... 49 5e-06
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro... 32 0.65
AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protei... 32 0.65
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei... 32 0.65
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB... 32 0.65
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD... 32 0.65
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 32 0.65
AY118618-1|AAM49987.1| 530|Drosophila melanogaster LP11159p pro... 30 2.6
AE014296-1972|AAS65022.1| 530|Drosophila melanogaster CG33490-P... 30 2.6
Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein. 29 6.1
Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein. 29 6.1
AY051596-1|AAK93020.1| 969|Drosophila melanogaster GH23814p pro... 29 6.1
AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,... 29 6.1
AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,... 29 6.1
AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,... 29 6.1
>BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p
protein.
Length = 46
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 2 PEVGELCLVRSKSGETLMEDRSDSDVQIDRRN 97
P+ GEL L+R KSGETLMEDR+ SDVQID +N
Sbjct: 15 PKDGELYLIRLKSGETLMEDRNSSDVQIDCQN 46
>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
Length = 2409
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 462 NLAFAITSXLASDIKAYFKHAANAYEKEKLNRNLEXLKIILXPSTQSAAS*NPIKSTP 635
N AI L ++ YF H+ NA E+ + +I PST + + P TP
Sbjct: 1578 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSVISKPSTTTTTTPRPTSKTP 1635
>AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protein
protein.
Length = 1449
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 462 NLAFAITSXLASDIKAYFKHAANAYEKEKLNRNLEXLKIILXPSTQSAAS*NPIKSTP 635
N AI L ++ YF H+ NA E+ + +I PST + + P TP
Sbjct: 618 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSVISKPSTTTTTTPRPTSKTP 675
>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
protein.
Length = 1462
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 462 NLAFAITSXLASDIKAYFKHAANAYEKEKLNRNLEXLKIILXPSTQSAAS*NPIKSTP 635
N AI L ++ YF H+ NA E+ + +I PST + + P TP
Sbjct: 631 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSVISKPSTTTTTTPRPTSKTP 688
>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
isoform B protein.
Length = 1374
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 462 NLAFAITSXLASDIKAYFKHAANAYEKEKLNRNLEXLKIILXPSTQSAAS*NPIKSTP 635
N AI L ++ YF H+ NA E+ + +I PST + + P TP
Sbjct: 543 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSVISKPSTTTTTTPRPTSKTP 600
>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
isoform D protein.
Length = 1450
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 462 NLAFAITSXLASDIKAYFKHAANAYEKEKLNRNLEXLKIILXPSTQSAAS*NPIKSTP 635
N AI L ++ YF H+ NA E+ + +I PST + + P TP
Sbjct: 619 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSVISKPSTTTTTTPRPTSKTP 676
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 32.3 bits (70), Expect = 0.65
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 462 NLAFAITSXLASDIKAYFKHAANAYEKEKLNRNLEXLKIILXPSTQSAAS*NPIKSTP 635
N AI L ++ YF H+ NA E+ + +I PST + + P TP
Sbjct: 1955 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSVISKPSTTTTTTPRPTSKTP 2012
>AY118618-1|AAM49987.1| 530|Drosophila melanogaster LP11159p
protein.
Length = 530
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 378 VKAPKKRSWDTMKG-VGRS*QXDPFEQSHNLAFAITSXLASDIKAYFKHAANAYEKEKL 551
VK P+K D KG +G+ P++ N+ F T +D+++ ++ + + + EKL
Sbjct: 208 VKKPQKDIDDRTKGPLGKKYSWYPYQIPENMTFGRTLPRETDVRSLLEYTSPSIKSEKL 266
>AE014296-1972|AAS65022.1| 530|Drosophila melanogaster CG33490-PA
protein.
Length = 530
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 378 VKAPKKRSWDTMKG-VGRS*QXDPFEQSHNLAFAITSXLASDIKAYFKHAANAYEKEKL 551
VK P+K D KG +G+ P++ N+ F T +D+++ ++ + + + EKL
Sbjct: 208 VKKPQKDIDDRTKGPLGKKYSWYPYQIPENMTFGRTLPRETDVRSLLEYTSPSIKSEKL 266
>Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein.
Length = 3347
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 237 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSG-PILVSXTGAVG*TKRSVKAPKKRSWDT 410
NDLN + F WV T N E+ DL +++PS L GA+ ++R+ + SWD+
Sbjct: 2712 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2767
>Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein.
Length = 3554
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 237 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSG-PILVSXTGAVG*TKRSVKAPKKRSWDT 410
NDLN + F WV T N E+ DL +++PS L GA+ ++R+ + SWD+
Sbjct: 2919 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2974
>AY051596-1|AAK93020.1| 969|Drosophila melanogaster GH23814p
protein.
Length = 969
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 237 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSG-PILVSXTGAVG*TKRSVKAPKKRSWDT 410
NDLN + F WV T N E+ DL +++PS L GA+ ++R+ + SWD+
Sbjct: 334 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 389
>AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,
isoform B protein.
Length = 3522
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 237 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSG-PILVSXTGAVG*TKRSVKAPKKRSWDT 410
NDLN + F WV T N E+ DL +++PS L GA+ ++R+ + SWD+
Sbjct: 2887 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2942
>AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,
isoform A protein.
Length = 3584
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 237 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSG-PILVSXTGAVG*TKRSVKAPKKRSWDT 410
NDLN + F WV T N E+ DL +++PS L GA+ ++R+ + SWD+
Sbjct: 2949 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 3004
>AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,
isoform C protein.
Length = 3719
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 237 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSG-PILVSXTGAVG*TKRSVKAPKKRSWDT 410
NDLN + F WV T N E+ DL +++PS L GA+ ++R+ + SWD+
Sbjct: 3084 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 3139
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,073,062
Number of Sequences: 53049
Number of extensions: 591178
Number of successful extensions: 1210
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -