Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1719
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 30 2.2
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 30 2.2
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 30 2.2
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 30 2.2
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 30 2.2
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 30 2.2
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 30 2.2
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 30 2.2
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 30 2.2
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.9
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 29 3.9
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 29 3.9
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 6.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 6.8
U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 6.8
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 28 8.9
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 28 8.9
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 8.9
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 8.9
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 8.9
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 28 8.9
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +2
Query: 98 AASNAVSARTESWTARRSALHYQRFRLKISDV------HLCTGRHPSIYLTRIVVRNGDV 259
A S A S S +++SA HY + D+ G+ PS+ +R +G
Sbjct: 91 AMSKATSVSVHSSVSQKSAQHYDLPPIPQYDMPPIVVGEAVVGKAPSVASSR----SGSH 146
Query: 260 YPMAKHHRHH-QESEHRNQTYD 322
+ +A HH HH Q S H T+D
Sbjct: 147 HSVASHHSHHSQHSHHSALTHD 168
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +2
Query: 98 AASNAVSARTESWTARRSALHYQRFRLKISDV------HLCTGRHPSIYLTRIVVRNGDV 259
A S A S S +++SA HY + D+ G+ PS+ +R +G
Sbjct: 91 AMSKATSVSVHSSVSQKSAQHYDLPPIPQYDMPPIVVGEAVVGKAPSVASSR----SGSH 146
Query: 260 YPMAKHHRHH-QESEHRNQTYD 322
+ +A HH HH Q S H T+D
Sbjct: 147 HSVASHHSHHSQHSHHSALTHD 168
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +2
Query: 98 AASNAVSARTESWTARRSALHYQRFRLKISDV------HLCTGRHPSIYLTRIVVRNGDV 259
A S A S S +++SA HY + D+ G+ PS+ +R +G
Sbjct: 91 AMSKATSVSVHSSVSQKSAQHYDLPPIPQYDMPPIVVGEAVVGKAPSVASSR----SGSH 146
Query: 260 YPMAKHHRHH-QESEHRNQTYD 322
+ +A HH HH Q S H T+D
Sbjct: 147 HSVASHHSHHSQHSHHSALTHD 168
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 176 GGTAGNGEQTSWQSSSPFSQKQRCSQPVR 90
GG G E+TS +S S +RCSQ VR
Sbjct: 8 GGAGGQHEETSMTLTSSTSADRRCSQDVR 36
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 144 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 200
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 201 PESISKESCC 210
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 144 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 200
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 201 PESISKESCC 210
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 PAITKESLCLTGSEXPLDLTG-CEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPA 213
P TKE L E D+ G C C E C+ V P P + CPP
Sbjct: 78 PTCTKEER-LVMVEKGSDIPGKCCAYYECHKKEKKCENVHCP-PMFQDEE-ECPPDSIRP 134
Query: 214 PVNISDEDCC 243
P +IS E CC
Sbjct: 135 PESISKESCC 144
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 603 LKNSELELVIHFCFFYALSV*CNVVSLFDTKRMFVLSAFVHR 478
+ ELE+VI CFF +S+ +V+L + M +L F+ R
Sbjct: 150 MTTGELEMVIISCFFLTVSI---IVALVQMRYMMILYNFLRR 188
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 97 GCEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGE 273
GC + C CENG E+ + + Q RC +P P N +C K C G+
Sbjct: 159 GCSKSCDCENGANCDPELGTCICTSGFQGERC---EKPCPDNKWGPNCVKSCPCQNGGK 214
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 97 GCEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGE 273
GC + C CENG E+ + + Q RC +P P N +C K C G+
Sbjct: 159 GCSKSCDCENGANCDPELGTCICTSGFQGERC---EKPCPDNKWGPNCVKSCPCQNGGK 214
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 97 GCEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGE 273
GC + C CENG E+ + + Q RC +P P N +C K C G+
Sbjct: 159 GCSKSCDCENGANCDPELGTCICTSGFQGERC---EKPCPDNKWGPNCVKSCPCQNGGK 214
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 97 GCEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGE 273
GC + C CENG E+ + + Q RC +P P N +C K C G+
Sbjct: 159 GCSKSCDCENGANCDPELGTCICTSGFQGERC---EKPCPDNKWGPNCVKSCPCQNGGK 214
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 112 CFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPAP 216
C EN E + C+P+ +PP N C L P
Sbjct: 194 CIGENQETKFECPCTPMKPIPPTNTDCSSLTNRIP 228
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 260 YPMAKHHRHHQESEHRNQT 316
Y +HH+HHQ+S +N T
Sbjct: 385 YNQPQHHQHHQQSHDQNST 403
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 157 PLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGEAPPSPP 291
P P PP PP+ P P+ C C P PP PP
Sbjct: 27 PPPCPPPP----PPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
>U28730-2|AAA68262.1| 1009|Caenorhabditis elegans Hypothetical
protein K10B2.5 protein.
Length = 1009
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 261 TQWRSTTVTTRSLNIETKRTIDHFKERFPASNLXVDF 371
T+ +T V T + +T+ + HF E SNL VDF
Sbjct: 745 TEIEATGVVTLLAHYQTRMHVIHFGEHMHFSNLPVDF 781
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 148 VCSPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCV---PNGEAPPSP 288
VC+ P PPQ PP PAP + C C+ P APP+P
Sbjct: 35 VCAT-PPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAP 83
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Frame = +1
Query: 100 CEQRCFCENGELDC---QEVCSPL--PAVP--PQNFRCPPLHRPAPV----NISDEDCC 243
CEQRCF +G QE P PA P P N PP +PV N D C
Sbjct: 1317 CEQRCFFVHGAQPSAARQEQAQPAAQPAQPAQPSNIVSPPQQSASPVVVPSNSKQRDAC 1375
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Frame = +1
Query: 100 CEQRCFCENGELDC---QEVCSPL--PAVP--PQNFRCPPLHRPAPV----NISDEDCC 243
CEQRCF +G QE P PA P P N PP +PV N D C
Sbjct: 1317 CEQRCFFVHGAQPSAARQEQAQPAAQPAQPAQPSNIVSPPQQSASPVVVPSNSKQRDAC 1375
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 154 SPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGEAPPSPPGV 297
+P P R PP RP P K W P PP PPG+
Sbjct: 136 TPNQTCPLNQVREPPPCRPCP---KGPPGIKGWPGFPGDVGPPGPPGL 180
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 154 SPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGEAPPSPPGV 297
+P P R PP RP P K W P PP PPG+
Sbjct: 173 TPNQTCPLNQVREPPPCRPCP---KGPPGIKGWPGFPGDVGPPGPPGL 217
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 154 SPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGEAPPSPPGV 297
+P P R PP RP P K W P PP PPG+
Sbjct: 157 TPNQTCPLNQVREPPPCRPCP---KGPPGIKGWPGFPGDVGPPGPPGL 201
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 537 CIKRSERRKNRNGLPIQVPNFLKTATSIHGR 629
CIK +K+ N L ++VPN L+ + + G+
Sbjct: 190 CIKWMNEKKDANTLKLKVPNSLEASFPVDGK 220
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 113 VSARTESWTARRSALHYQRFRLKISDVHLCTGRH-PSIYLTRIVVRNGDVYPMAKHHRHH 289
++ + W + + A + +++ DVH+ + PS++ NG M K +HH
Sbjct: 465 INPKARKWWSEQFA--FDKYKGTTKDVHIWNDMNEPSVF-------NGPEITMHKDAKHH 515
Query: 290 QESEHRN 310
E EHR+
Sbjct: 516 GEFEHRD 522
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,896,857
Number of Sequences: 27780
Number of extensions: 437884
Number of successful extensions: 1555
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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