Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1718
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 381 e-107
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 381 e-107
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 381 e-107
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 123 3e-29
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 118 7e-28
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 91 1e-19
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 36 0.006
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 28 1.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.2
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 27 2.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 2.9
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 27 3.8
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 26 5.0
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 5.0
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 26 5.0
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 26 6.6
SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit |Sc... 26 6.6
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 26 6.6
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 8.7
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.7
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 25 8.7
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 25 8.7
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 381 bits (937), Expect = e-107
Identities = 176/248 (70%), Positives = 210/248 (84%)
Frame = +1
Query: 7 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 186
TGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T + +AR+EEI KE S++IK
Sbjct: 120 TGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIK 177
Query: 187 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
K+G+NP TV FVP+SG+ GDNM+EP+ MPW++GW + K G V+GK L+EA+D+I+PP+
Sbjct: 178 KVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPA 237
Query: 367 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+V FAPA +TTEVKSVEMHHE+L
Sbjct: 238 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESL 297
Query: 547 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLNHPGDKSXTGI 726
+PGDNVGFNVKNVSVK++RRG V GDSKN PP G + FTAQ + LNHPG S G
Sbjct: 298 DAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQ-VIILNHPGQIS-AGY 355
Query: 727 LPVLDCHT 750
PVLDCHT
Sbjct: 356 SPVLDCHT 363
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 381 bits (937), Expect = e-107
Identities = 176/248 (70%), Positives = 210/248 (84%)
Frame = +1
Query: 7 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 186
TGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T + +AR+EEI KE S++IK
Sbjct: 120 TGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIK 177
Query: 187 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
K+G+NP TV FVP+SG+ GDNM+EP+ MPW++GW + K G V+GK L+EA+D+I+PP+
Sbjct: 178 KVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPA 237
Query: 367 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+V FAPA +TTEVKSVEMHHE+L
Sbjct: 238 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESL 297
Query: 547 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLNHPGDKSXTGI 726
+PGDNVGFNVKNVSVK++RRG V GDSKN PP G + FTAQ + LNHPG S G
Sbjct: 298 DAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQ-VIILNHPGQIS-AGY 355
Query: 727 LPVLDCHT 750
PVLDCHT
Sbjct: 356 SPVLDCHT 363
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 381 bits (937), Expect = e-107
Identities = 176/248 (70%), Positives = 210/248 (84%)
Frame = +1
Query: 7 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 186
TGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T + +AR+EEI KE S++IK
Sbjct: 120 TGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIK 177
Query: 187 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
K+G+NP TV FVP+SG+ GDNM+EP+ MPW++GW + K G V+GK L+EA+D+I+PP+
Sbjct: 178 KVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPA 237
Query: 367 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+V FAPA +TTEVKSVEMHHE+L
Sbjct: 238 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESL 297
Query: 547 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLNHPGDKSXTGI 726
+PGDNVGFNVKNVSVK++RRG V GDSKN PP G + FTAQ + LNHPG S G
Sbjct: 298 DAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQ-VIILNHPGQIS-AGY 355
Query: 727 LPVLDCHT 750
PVLDCHT
Sbjct: 356 SPVLDCHT 363
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 123 bits (296), Expect = 3e-29
Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 4/225 (1%)
Frame = +1
Query: 16 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSY-IKKI 192
FE G +NGQTREHA L LG+ +++V VNK+D + E R++EIK VS + IK +
Sbjct: 293 FERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMV 350
Query: 193 GYNPATVAFVPISGWHGDNML--EPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
G+ + V FVPIS G N++ + SD W+KG T L+ ALD + PP
Sbjct: 351 GFKTSNVHFVPISAISGTNLIQKDSSDLYKWYKGPT------------LLSALDQLVPPE 398
Query: 367 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
+P KPLRL + DVY+ TV GRVE G ++ V+ + VK+V + +
Sbjct: 399 KPYRKPLRLSIDDVYRSPRSVTV-TGRVEAGNVQVNQVLYDVSSQEDAYVKNVIRNSDPS 457
Query: 547 QE-AMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQ 678
A+ GD V + ++ V +LR G + + +N P + F A+
Sbjct: 458 STWAVAGDTVTLQLADIEVNQLRPGDILSNYEN-PVRRVRSFVAE 501
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 118 bits (285), Expect = 7e-28
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 5/252 (1%)
Frame = +1
Query: 10 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 189
GEFEAG + GQTREHA+LA T G+ L+V +NKMD + E RY+E ++S ++++
Sbjct: 352 GEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRR 411
Query: 190 I-GYNPAT-VAFVPISGWHGDNMLEPSDK--MPWFKGWTIDRKDGKVEGKCLIEALDAIQ 357
+ GYN T V ++P+S + G N+ + D PW+ +G L+E LD++
Sbjct: 412 VAGYNSKTDVKYMPVSAYTGQNVKDRVDSSVCPWY------------QGPSLLEYLDSMT 459
Query: 358 PPSRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSV-EMH 534
R P +P+ YK +GT+ G++E G +K V+ P T EV ++ +
Sbjct: 460 HLERKVNAPFIMPIASKYK--DLGTILEGKIEAGSIKKNSNVLVMPINQTLEVTAIYDEA 517
Query: 535 HEALQEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLNHPGDKS 714
E + ++ GD V V+ +++ GYV +KN P + F AQ + L P +
Sbjct: 518 DEEISSSICGDQVRLRVRG-DDSDVQTGYVLTSTKN-PVHATTRFIAQIAI-LELPSILT 574
Query: 715 XTGILPVLDCHT 750
TG V+ HT
Sbjct: 575 -TGYSCVMHIHT 585
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 91.5 bits (217), Expect = 1e-19
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Frame = +1
Query: 43 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATVAFV 222
QTREH LLA +GVKQ++V +NK+D EP E E+++ +S Y
Sbjct: 156 QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY-------------- 201
Query: 223 PISGWHGDNM-LEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDA-IQPPSRPTEKPLRLP 396
G+ GDN + + +G + + G L+EA+D+ I P R T+ P +
Sbjct: 202 ---GFDGDNTPIVSGSALCALEGR--EPEIGLNSITKLMEAVDSYITLPERKTDVPFLMA 256
Query: 397 LQDVYKIGGIGTVPVGRVETGILKPG--MVVVFAPAAITTEVKSVEMHHEALQEAMPGDN 570
++DV+ I G GTV GRVE G LK G + +V + + T V +EM + L A+ GDN
Sbjct: 257 IEDVFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSHLKTTVTGIEMFKKQLDAAVAGDN 316
Query: 571 VGFNVKNVSVKELRRGYVAGDSKNAPP 651
G ++++ ++L+RG + P
Sbjct: 317 CGLLLRSIKREQLKRGMIVAQPGTVAP 343
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 35.9 bits (79), Expect = 0.006
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = +1
Query: 271 MPWFKGWTIDRKDGKVEGKCLIEALDAIQPPSRPTEKPLRLPLQDVYKIGGIGTVPVGRV 450
+P K + K GK + L E + I PP PLR L D + G + + R+
Sbjct: 206 IPMSKPILVSSKTGKNVEQILPEIIQKIPPPKGSENAPLRCLLIDSWYNSYQGVIGLVRI 265
Query: 451 ETGILKPGMVVVFAPAAITTEVKSVEMHHEALQEA--MPGDNVGF---NVKNV 594
G +K G V+ EV+ V + + + E + VG+ N+KN+
Sbjct: 266 MEGFIKKGGKVMSVNTGRKYEVQQVGIMYPDMTEVSRLRAGQVGYIIWNMKNI 318
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 163 KEVS---SYIKKIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCL 333
KEVS SYI +P T +G+ +N+++P P FKG ++ + K+ + L
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKGPNYNKFNAKLYLESL 218
Query: 334 IEALDAIQPPS 366
E P S
Sbjct: 219 REKRRTYTPLS 229
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = -2
Query: 617 PRRSSFTDTFLTLKPTLSPGIASCSA-----SWCISTDLTSVVIAAGANTTTIPGLRIPV 453
P +S TDT + PT S + ++ S +ST +T V ++T+IP
Sbjct: 209 PTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTST 268
Query: 452 STRPTGTVPIP 420
S+ T + P+P
Sbjct: 269 SSTDTNSSPLP 279
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 572 TLSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPVSTRPTGTVPIP 420
T S I S +ST +T V ++T+IP S+ T + P+P
Sbjct: 173 TTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLP 223
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 572 TLSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPVSTRPTGTVPIP 420
T S I S +ST +T V ++T+IP S+ T + P+P
Sbjct: 116 TTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLP 166
Score = 25.4 bits (53), Expect = 8.7
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 1/205 (0%)
Frame = -2
Query: 617 PRRSSFTDTFLTLKPTLSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPVSTRPT 438
P +S TDT + PT S SC+ S TS+ G +TT + P ST T
Sbjct: 265 PTSTSSTDTNSSPLPTTS---TSCTTS-------TSIP-PTGNSTTPVTPTVPPTSTSST 313
Query: 437 GTVPIPPILYTS*RGKRRGFSVGRDGGCIASSASMRHFPSTLPSLRSMVHPLNQGILSEG 258
+ P PP TS S G + S+++ +++P + P+ +
Sbjct: 314 -STP-PPPASTS--------STGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTS 363
Query: 257 SSILSPCQPDIGTNATVAGL*PIFLM*EDTSFLISS*RASW*GGSVESILFT-PTISCFT 81
+S S P T++T P L+ TS S+ G S + T P S T
Sbjct: 364 TSSTSTPPPPASTSSTGTSSSP--LLSTSTSCTTST-SIPPTGNSTTPVTPTVPPTSSST 420
Query: 80 PRVKASRACSRVCPFLLIPASNSPV 6
P + S P+ P +++P+
Sbjct: 421 PLTTTNCTTSTSVPYTSTPVTSTPL 445
Score = 25.4 bits (53), Expect = 8.7
Identities = 27/108 (25%), Positives = 41/108 (37%)
Frame = -2
Query: 632 SPAT*PRRSSFTDTFLTLKPTLSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPV 453
+P P +S T T T S G +S ++ TS I N+TT +P
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPP 361
Query: 452 STRPTGTVPIPPILYTS*RGKRRGFSVGRDGGCIASSASMRHFPSTLP 309
++ + + P PP TS G + C S++ ST P
Sbjct: 362 TSTSSTSTP-PPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTP 408
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 153 FIASLMVRRFGRVHFIHADNKLFYAKSESKQGVFASLSILTDTGFE 16
F+A LM+ RVH D LF+ K VF+ S + D FE
Sbjct: 34 FLAELMLP--DRVHERREDWSLFFIHFSKKSNVFSLFSNVDDINFE 77
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 2.9
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = -2
Query: 584 TLKPTLSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPVSTRPTGTVPIPPILYT 405
T+ + + ASC S + + +SVV+ + T T+ VST TGTV +P YT
Sbjct: 65 TIAISQTDNAASCIPSASLLS--SSVVLYSAKETVTVSSYWSLVSTSVTGTVYVP---YT 119
Query: 404 S 402
S
Sbjct: 120 S 120
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.8
Identities = 32/110 (29%), Positives = 44/110 (40%)
Frame = -2
Query: 665 SEAPLGGAFLESPAT*PRRSSFTDTFLTLKPTLSPGIASCSASWCISTDLTSVVIAAGAN 486
S AP + +PAT SF +L T + S +A+ S + A G+N
Sbjct: 183 SNAPPASSTSTTPATGSGGFSFGKP-ASLGSTNNAS-TSTTANSGFSFGKPATTSAPGSN 240
Query: 485 TTTIPGLRIPVSTRPTGTVPIPPILYTS*RGKRRGFSVGRDGGCIASSAS 336
TT P I TGT P + GFS G+ G AS+A+
Sbjct: 241 TTVTPSSSI------TGTNDSKPAASNTGSAPTTGFSFGKPAGQAASTAT 284
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -1
Query: 153 FIASLMVRRFGRVHFIHAD-NKLFYA 79
F+ +L FGRVH + ++ N+L+YA
Sbjct: 203 FLQTLGTGSFGRVHLVQSNHNRLYYA 228
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 631 DSKNAPPKGASDFTAQGELCLNHPGDKSXTGILPVLD 741
D N PPK F HP +S TGI+ +D
Sbjct: 582 DKPNGPPKYIHHFWVHTWFDKTHPDIESITGIIRCID 618
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 329 HFPSTLPSLRSMVHPLNQGILSEGSSILSPCQPDIGT 219
HFP T L + N + S SSIL PC P I +
Sbjct: 214 HFPFTQSPL-TKTKSFNDALTSS-SSILKPCMPSIAS 248
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 25.8 bits (54), Expect = 6.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 381 APSLASSGRVQDRRNRNGASWTSGDRNSQAWYGCGICSGSYY 506
+PS ASS R +R+GAS T+G R + A I +G Y+
Sbjct: 138 SPSGASSARQTPAPSRSGAS-TAGRRRTSATTRGAIQNGVYH 178
>SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 138
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 121 TEPPYHEARYEEIKKEVSSYIKK 189
+EPP + + YE+ KKE+ I+K
Sbjct: 9 SEPPVNVSYYEQCKKELHEMIEK 31
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 6.6
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +1
Query: 220 VPISGWHGDNMLEPSDKMPWFKGWTIDRKD 309
+P+ + G ++ P+D++ + K W +D+ +
Sbjct: 445 LPVRMFSGPHLANPNDELVYEKDWKLDKSE 474
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 43 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYI 183
QT EH + +K +I+ NK+D E Y+ I K + +
Sbjct: 149 QTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 8.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 608 SSFTDTFLTLKPTLSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPVSTRPTGTV 429
SS T+T + SP ++S S LTSV I + + T + I ST + T+
Sbjct: 194 SSSTNTVILTTSVNSPAVSS-------SETLTSVSITSTESAYTSSSVDIAASTTASSTL 246
Query: 428 PI 423
P+
Sbjct: 247 PV 248
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 314 KSRENVSSRRSMRYSLRHGRLRSPFACLFRTCT 412
K+R + R+M++ H R R+P + +++ CT
Sbjct: 288 KARYLRNKTRNMKWHTIHERQRNPRSAIYQACT 320
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 341 ASMRHFPSTLPSLRSMVHPLNQGILSEGS 255
AS F L ++VHP+ Q + SEG+
Sbjct: 617 ASKEEFEDQRQKLDAVVHPITQKLYSEGA 645
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,112,932
Number of Sequences: 5004
Number of extensions: 66004
Number of successful extensions: 200
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -