Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1718
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 462 e-132
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 445 e-127
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 418 e-119
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 249 2e-68
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 130 1e-32
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 24 1.8
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 24 1.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 5.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 9.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 9.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 462 bits (1140), Expect = e-132
Identities = 218/248 (87%), Positives = 229/248 (92%)
Frame = +1
Query: 7 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 186
TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPY E R+EEIKKEVSSYIK
Sbjct: 120 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIK 179
Query: 187 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
KIGYNPA VAFVPISGWHGDNMLE S KMPWFKGWT++RK+GKVEGKCLIEALDAI PP+
Sbjct: 180 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 239
Query: 367 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
RPT+K LRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV FAPA +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEAL 299
Query: 547 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLNHPGDKSXTGI 726
QEA+PGDNVGFNVKNVSVKELRRGYVAGDSKN PPKGA+DFTAQ + LNHPG S G
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQ-VIVLNHPGQIS-NGY 357
Query: 727 LPVLDCHT 750
PVLDCHT
Sbjct: 358 TPVLDCHT 365
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 445 bits (1096), Expect = e-127
Identities = 209/247 (84%), Positives = 224/247 (90%)
Frame = +1
Query: 10 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 189
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPY EAR+EEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 190 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPSR 369
IGYN A+VAFVPISGWHGDNMLEPS K PW+KGW ++RKDG +GK LIEALDAI PPSR
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSR 240
Query: 370 PTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEALQ 549
PT+K LRLPLQDVYKIGGIGTVPVGRVETGILKPGM+V FAPAA+TTEVKSVEMHHEAL
Sbjct: 241 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALT 300
Query: 550 EAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLNHPGDKSXTGIL 729
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GA+DFTAQ + LNHPG S G
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQ-VIVLNHPGQIS-NGYT 358
Query: 730 PVLDCHT 750
PVLDCHT
Sbjct: 359 PVLDCHT 365
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 569 LSPGIASCSASWCISTDLTSVVIAAGANTTTIPG 468
L PG+ A ++T++ SV + A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 418 bits (1030), Expect = e-119
Identities = 194/212 (91%), Positives = 203/212 (95%)
Frame = +1
Query: 7 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 186
TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPY E R+EEIKKEVSSYIK
Sbjct: 63 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIK 122
Query: 187 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
KIGYNPA VAFVPISGWHGDNMLE S KMPWFKGWT++RK+GKVEGKCLIEALDAI PP+
Sbjct: 123 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 182
Query: 367 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
RPT+K LRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV FAPA +TTEVKSVEMHHEAL
Sbjct: 183 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEAL 242
Query: 547 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSKN 642
QEA+PGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 249 bits (610), Expect = 2e-68
Identities = 113/125 (90%), Positives = 119/125 (95%)
Frame = +1
Query: 7 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 186
TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPY E R+EEIKKEVSSYIK
Sbjct: 47 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIK 106
Query: 187 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 366
KIGYNPA VAFVPISGWHGDNMLE S KMPWFKGWT++RK+GKVEGKCLIEALDAI PP+
Sbjct: 107 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 166
Query: 367 RPTEK 381
RPT+K
Sbjct: 167 RPTDK 171
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 130 bits (315), Expect = 1e-32
Identities = 62/78 (79%), Positives = 67/78 (85%)
Frame = +1
Query: 517 KSVEMHHEALQEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNAPPKGASDFTAQGELCLN 696
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GA+DFTAQ + LN
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQ-VIVLN 59
Query: 697 HPGDKSXTGILPVLDCHT 750
HPG S G PVLDCHT
Sbjct: 60 HPGQIS-NGYTPVLDCHT 76
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 240 VPARYRYERHSSGIVTNFLNV 178
+PA R++ H +G++T NV
Sbjct: 76 LPANKRFQAHCAGVITALNNV 96
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 240 VPARYRYERHSSGIVTNFLNV 178
+PA R++ H +G++T NV
Sbjct: 76 LPANKRFQAHCAGVITALNNV 96
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +1
Query: 133 YHEARYEEIKKEVSSYIKKIGYNPATVAFVPI 228
Y+ + Y ++Y KK+ YN + +P+
Sbjct: 89 YNYSNYNNYNNNYNNYNKKLYYNINYIEQIPV 120
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 442 GRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 546
G +E + P M +V+A + I S+E A+
Sbjct: 143 GHIEDDYVGPAMELVYAWSTIDYTYDSIEARDSAI 177
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -2
Query: 137 W*GGSVESILFTPTISCFTPRVKASRACSRVCPFLLI 27
W G ++E+ + F+ V + CS P ++I
Sbjct: 477 WLGETIEAKTYPEVTMLFSDIVGFTEICSTATPMMVI 513
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,164
Number of Sequences: 438
Number of extensions: 5027
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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