Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1715
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p pro...   345   5e-95
AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA...   345   5e-95
BT003641-1|AAO39645.1|  434|Drosophila melanogaster AT14896p pro...    30   2.6  
AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA...    30   2.6  
AM294190-1|CAL26094.1|   56|Drosophila melanogaster CG17956 prot...    30   3.5  
AY047518-1|AAK77250.1|  535|Drosophila melanogaster GH02452p pro...    29   8.0  
AE014296-1822|AAN11917.1|  535|Drosophila melanogaster CG32063-P...    29   8.0  
AE014296-1821|AAN11916.1|  535|Drosophila melanogaster CG32063-P...    29   8.0  

>AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p
           protein.
          Length = 295

 Score =  345 bits (847), Expect = 5e-95
 Identities = 160/232 (68%), Positives = 185/232 (79%)
 Frame = +2

Query: 5   WYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIF 184
           WYT++G+ELSRQLD WL  ADL+HGPARAIIAPH              RQVSPVVVKRIF
Sbjct: 12  WYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPVVVKRIF 71

Query: 185 ILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEM 364
           ILGPSHHVR+ GCALS   KY+TPLYDL ID QI +ELE T +F  MD +TDE+EHSIEM
Sbjct: 72  ILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEM 131

Query: 365 HLPYIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGS 544
           HLPYIAKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL DP NL VISSDFCHWG 
Sbjct: 132 HLPYIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGH 191

Query: 545 RFRYTWKDSSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYXNTICGRH 700
           RF YT+ DSS G I++SIE LDK GMD+IE ++P +FT+YL KY NTICGRH
Sbjct: 192 RFSYTYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRH 243


>AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA
           protein.
          Length = 295

 Score =  345 bits (847), Expect = 5e-95
 Identities = 160/232 (68%), Positives = 185/232 (79%)
 Frame = +2

Query: 5   WYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIF 184
           WYT++G+ELSRQLD WL  ADL+HGPARAIIAPH              RQVSPVVVKRIF
Sbjct: 12  WYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPVVVKRIF 71

Query: 185 ILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEM 364
           ILGPSHHVR+ GCALS   KY+TPLYDL ID QI +ELE T +F  MD +TDE+EHSIEM
Sbjct: 72  ILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEM 131

Query: 365 HLPYIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGS 544
           HLPYIAKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL DP NL VISSDFCHWG 
Sbjct: 132 HLPYIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGH 191

Query: 545 RFRYTWKDSSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYXNTICGRH 700
           RF YT+ DSS G I++SIE LDK GMD+IE ++P +FT+YL KY NTICGRH
Sbjct: 192 RFSYTYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRH 243


>BT003641-1|AAO39645.1|  434|Drosophila melanogaster AT14896p
           protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 356 WNAHFHRSARPFYRTDVWPP 297
           W  HF ++  P   TD+WPP
Sbjct: 350 WFTHFAKTGTPLNSTDIWPP 369


>AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA
           protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 356 WNAHFHRSARPFYRTDVWPP 297
           W  HF ++  P   TD+WPP
Sbjct: 480 WFTHFAKTGTPLNSTDIWPP 499


>AM294190-1|CAL26094.1|   56|Drosophila melanogaster CG17956
           protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -3

Query: 617 PVC-PTTRCSGKCGPWSYPSTC 555
           P C P   C G CGPW  P+ C
Sbjct: 16  PCCGPCGPCGGGCGPWYGPNVC 37


>AY047518-1|AAK77250.1|  535|Drosophila melanogaster GH02452p
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +1

Query: 454 GSQVRSDTGAVFGRPSKPAGDLIRLLPLGQQIQVHVEG*LQGPHLPEHRVVGQTGNG 624
           G  V+   G V G   K +G   RL P G++    V+G L    + E ++ G+ G G
Sbjct: 40  GDTVKGGKGIVLGLYEKESGKGPRLTPAGEKFDDRVQGKL-SELVCETKLTGRLGRG 95


>AE014296-1822|AAN11917.1|  535|Drosophila melanogaster CG32063-PB,
           isoform B protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +1

Query: 454 GSQVRSDTGAVFGRPSKPAGDLIRLLPLGQQIQVHVEG*LQGPHLPEHRVVGQTGNG 624
           G  V+   G V G   K +G   RL P G++    V+G L    + E ++ G+ G G
Sbjct: 40  GDTVKGGKGIVLGLYEKESGKGPRLTPAGEKFDDRVQGKL-SELVCETKLTGRLGRG 95


>AE014296-1821|AAN11916.1|  535|Drosophila melanogaster CG32063-PA,
           isoform A protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +1

Query: 454 GSQVRSDTGAVFGRPSKPAGDLIRLLPLGQQIQVHVEG*LQGPHLPEHRVVGQTGNG 624
           G  V+   G V G   K +G   RL P G++    V+G L    + E ++ G+ G G
Sbjct: 40  GDTVKGGKGIVLGLYEKESGKGPRLTPAGEKFDDRVQGKL-SELVCETKLTGRLGRG 95


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,984,256
Number of Sequences: 53049
Number of extensions: 811057
Number of successful extensions: 2302
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2300
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)