Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1712
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 135 3e-32
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 111 6e-25
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 94 1e-19
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 92 3e-19
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 92 3e-19
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 92 3e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 80 2e-15
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 79 4e-15
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 75 4e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 75 4e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 75 4e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 71 8e-13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 71 8e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 68 8e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 67 1e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 67 1e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 67 1e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 60 2e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 60 2e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 8e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 8e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 57 1e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 55 6e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 52 3e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 50 2e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.087
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.12
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.15
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 33 0.15
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.15
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.1
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.1
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.3
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 5.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 5.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 5.7
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 135 bits (326), Expect = 3e-32
Identities = 65/151 (43%), Positives = 100/151 (66%)
Frame = +2
Query: 227 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 406
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 586
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 587 PIRERVMVPIALVLAPTRELAQQIQQXAADF 679
R+R P LVL PTRELAQQ+Q+ + DF
Sbjct: 196 H-RQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 120 bits (288), Expect = 1e-27
Identities = 57/147 (38%), Positives = 90/147 (61%)
Frame = +2
Query: 239 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 418
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRE 598
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 599 RVMVPIALVLAPTRELAQQIQQXAADF 679
P+A+++ PTRELA Q+ Q A F
Sbjct: 336 G-EGPVAVIVVPTRELAIQVFQEAKKF 361
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 115 bits (276), Expect = 4e-26
Identities = 54/119 (45%), Positives = 79/119 (66%), Gaps = 3/119 (2%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 511
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 512 GVAQTGSGKTLAYILPAIVHINNQPPI---RERVMVPIALVLAPTRELAQQIQQXAADF 679
GVA+TGSGKT A++LP +V I + P + R + P A+++APTRELAQQI++ F
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKF 401
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 111 bits (266), Expect = 6e-25
Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Frame = +2
Query: 227 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 403
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 404 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 583
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 584 PPIRERVMVPIALVLAPTRELAQQIQQXAADFWTP 688
P + E PIA++LAPTRELA Q + A F P
Sbjct: 370 PELEEG-DGPIAVILAPTRELAMQTYKEANKFAKP 403
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 93.9 bits (223), Expect = 1e-19
Identities = 48/107 (44%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Frame = +2
Query: 359 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 535
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 536 KTLAYILPAIVHINNQ-----PPIRERVMVPIALVLAPTRELAQQIQ 661
KTLA++LPA++HI+ Q E+ P LVL+PTRELAQQI+
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 92.3 bits (219), Expect = 3e-19
Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 506 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI---RERVMVPIALVLAPTRELAQQI 658
L+ AQTGSGKT A++LP I HI +PP R P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 659 QQXAADFWTPSYVRTRV 709
+ A F S ++T +
Sbjct: 239 HKEATKFSYKSNIQTAI 255
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 92.3 bits (219), Expect = 3e-19
Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 506 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI---RERVMVPIALVLAPTRELAQQI 658
L+ AQTGSGKT A++LP I HI +PP R P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 659 QQXAADFWTPSYVRTRV 709
+ A F S ++T +
Sbjct: 223 HKEATKFSYKSNIQTAI 239
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 92.3 bits (219), Expect = 3e-19
Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 506 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI---RERVMVPIALVLAPTRELAQQI 658
L+ AQTGSGKT A++LP I HI +PP R P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 659 QQXAADFWTPSYVRTRV 709
+ A F S ++T +
Sbjct: 220 HKEATKFSYKSNIQTAI 236
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 463
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 464 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRERVMVPIALVLAP 634
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R P L++ P
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFM-RSEGPFGLIIVP 274
Query: 635 TRELAQQI 658
+RELA+QI
Sbjct: 275 SRELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 529
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 530 SGKTLAYILPAI----------VHINNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
SGKT A+++P + VH + + P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHI---NNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
+ + NN E P ++L PTRELA QI F
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHI---NNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
+ + NN E P ++L PTRELA QI F
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHI---NNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
+ + NN E P ++L PTRELA QI F
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 70.9 bits (166), Expect = 8e-13
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 560 AIVHINNQPPIR---ERVMVPIALVLAPTRELAQQIQQXAADF 679
+ + + + E P ++L PTRELA QI F
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 70.9 bits (166), Expect = 8e-13
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 560 AIVHINNQPPIR---ERVMVPIALVLAPTRELAQQIQQXAADF 679
+ + + + E P ++L PTRELA QI F
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/91 (39%), Positives = 52/91 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
+ +P V LVL PTRELA Q+ Q
Sbjct: 210 MIYRPKGASCTRV---LVLVPTRELAIQVFQ 237
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 I---NNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
+ N+ E P ++L PTREL QI F
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 I---NNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
+ N+ E P ++L PTREL QI F
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 I---NNQPPIRERVMVPIALVLAPTRELAQQIQQXAADF 679
+ N+ E P ++L PTREL QI F
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 574
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 575 -NNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
++Q V P AL++APTREL QI +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 553
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 554 LPAIVHINNQPPIRERVMVPIALVLAPTRELAQQ 655
+P + + + R AL+++PTRELA Q
Sbjct: 80 IPMLQKLKRRDTTGIR-----ALMVSPTRELALQ 108
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 553
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 554 LPAIVHINNQPPIRERVMVPIALVLAPTRELAQQ 655
+P + + + R AL+++PTRELA Q
Sbjct: 80 IPMLQKLKRRDTTGIR-----ALMVSPTRELALQ 108
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/91 (36%), Positives = 52/91 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
++ P AL+L PTRELA QI +
Sbjct: 151 LSVDP------YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/91 (36%), Positives = 52/91 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
++ P AL+L PTRELA QI +
Sbjct: 151 LSVDP------YGIYALILTPTRELAFQIAE 175
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/94 (31%), Positives = 58/94 (61%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 563 IVHINNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
+ I+++ P + ALV+APTRELAQQIQ+
Sbjct: 88 LQRIDHEDPHVQ------ALVMAPTRELAQQIQK 115
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/94 (31%), Positives = 58/94 (61%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 563 IVHINNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
+ I+++ P + ALV+APTRELAQQIQ+
Sbjct: 88 LQRIDHEDPHVQ------ALVMAPTRELAQQIQK 115
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
+ + P LVL PTRELA QI Q
Sbjct: 106 LLDHP------QAFFCLVLTPTRELAFQIGQ 130
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 57.6 bits (133), Expect = 8e-09
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 329 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 509 VGVAQTGSGKTLAYILPAIVHI----NNQPPIRERVMVPIALVLAPTRELAQQ 655
V A TGSGKTLA+++P ++ + + + P L++APTREL Q
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 57.6 bits (133), Expect = 8e-09
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 329 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 509 VGVAQTGSGKTLAYILPAIVHI----NNQPPIRERVMVPIALVLAPTRELAQQ 655
V A TGSGKTLA+++P ++ + + + P L++APTREL Q
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/96 (31%), Positives = 57/96 (59%)
Frame = +2
Query: 377 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 556
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 557 PAIVHINNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
+ ++ Q +RE AL+L+PTRELA QIQ+
Sbjct: 83 SVLQSLDTQ--VRETQ----ALILSPTRELAVQIQK 112
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 56.8 bits (131), Expect = 1e-08
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 299 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 478
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 479 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----NNQPPIRERVMVPIALVLAPTREL 646
P +N++ A TGSGKTLA+ LP I I +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 647 AQQ 655
A Q
Sbjct: 217 AAQ 219
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/89 (28%), Positives = 52/89 (58%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQI 658
+ + + + P A+++APT+EL QI
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQI 179
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/94 (30%), Positives = 56/94 (59%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 563 IVHINNQPPIRERVMVPIALVLAPTRELAQQIQQ 664
+ ++ Q +RE AL+L+PTRELA QIQ+
Sbjct: 85 LQSLDTQ--VRETQ----ALILSPTRELAVQIQK 112
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +2
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRERVM 607
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALK---- 110
Query: 608 VPIALVLAPTRELAQQIQQXAAD 676
A+V+ PTRELA Q Q +
Sbjct: 111 AIQAMVIVPTRELALQTSQICVE 133
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Frame = +2
Query: 446 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRERVM 607
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + ++Q V
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 608 VPIALVLAPTRELAQQIQQ 664
P AL++APTREL QI +
Sbjct: 68 GPRALIVAPTRELVIQIMK 86
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRERV 604
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P + + +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYG 148
Query: 605 MVPIALVLAPTRELAQQ 655
+ AL+++PTRELA Q
Sbjct: 149 LG--ALIISPTRELALQ 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 557 PAIVHINNQPPIRERVMVPIALVLAPTRELAQQI 658
+ I+ +M P + LAPT ELA+QI
Sbjct: 268 TMLCRID------VNLMCPQCICLAPTLELAKQI 295
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 557 PAIVHINNQPPIRERVMVPIALVLAPTRELAQQI 658
+ I+ +M P + LAPT ELA+QI
Sbjct: 293 TMLCRID------VNLMCPQCICLAPTLELAKQI 320
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 557 PAIVHINNQPPIRERVMVPIALVLAPTRELAQQI 658
+ I+ +M P + LAPT ELA+QI
Sbjct: 677 TMLCRID------VNLMCPQCICLAPTLELAKQI 704
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/106 (26%), Positives = 59/106 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQIQQXAADFWTPSYVRTRV 709
++++ ++V+V PTRE++ QI++ P+ RT V
Sbjct: 84 LDSRSSHIQKVIV------TPTREISVQIKETVRKV-APTGARTSV 122
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/106 (26%), Positives = 59/106 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 572 INNQPPIRERVMVPIALVLAPTRELAQQIQQXAADFWTPSYVRTRV 709
++++ ++V+V PTRE++ QI++ P+ RT V
Sbjct: 84 LDSRSSHIQKVIV------TPTREISVQIKETVRKV-APTGARTSV 122
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +2
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIR 595
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I R
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 596 ERVMV---PIALVLAPTRELAQQIQQ 664
+ P+AL+LAPTRELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/77 (35%), Positives = 50/77 (64%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRERV 604
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 605 MVPIALVLAPTRELAQQ 655
+ ++++PTREL+ Q
Sbjct: 140 GTGV-IIVSPTRELSMQ 155
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 563 IVHINNQPPIRERVMVPIALVLAPTRELAQQI 658
+ I N + AL+L+P+REL QI
Sbjct: 68 MRMIQNAKLQPADIG---ALILSPSRELCSQI 96
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 482 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPP--IRERVMVPIALVLA 631
P + +++ A TGSGKT+ Y+LP + + ++P ++ ++VP+ ++A
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVA 202
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +2
Query: 488 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ----PPIRERVMVP 613
A+ GKN V VA TGSGKT I A+ HI + P R ++VP
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEERTSQGKPSRVVLLVP 427
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 464 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRERVM-VPIALVLAP 634
+Q + G+ LV A TG GKT A+++PAI N Q E P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 635 TRELAQQI 658
T L Q+
Sbjct: 79 TSALVDQL 86
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 500 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRERVMV---PIALVLAPTRELAQQI 658
+ L+ A TG GKT A+++PAI + P+ + P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 464 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRERVM-VPIALVLAP 634
+Q + G+ LV A TG GKT A+++PAI N Q E P L++A
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 635 TRELAQQI 658
T L Q+
Sbjct: 179 TSALVDQL 186
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRERV 604
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 605 MVPIALVLAPTRELAQQIQQ 664
++LAP R +AQ+ +
Sbjct: 67 ----VILLAPQRGMAQRAHE 82
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 443 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRERVMVPI 616
G+K PIQ Q + + S +N++ A GSGKT L + H N P + + P+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAKAVYITPM 1376
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 461 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 568
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 461 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 568
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 93 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 209
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 524 TGSGKTLAYILPAIVH 571
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 443 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRERVMVP-- 613
GYK IQ++ A+ K +L+ A TG+GKT +L + I N V +
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEF 332
Query: 614 IALVLAPTRELAQQI 658
+ +APT+ L Q++
Sbjct: 333 KIVYIAPTKSLVQEM 347
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 485 IAMSGKNLVGVAQTGSGKTL 544
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 485 IAMSGKNLVGVAQTGSGKTL 544
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,678,872
Number of Sequences: 27780
Number of extensions: 348168
Number of successful extensions: 1105
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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